RNA–Protein interactions for RNA: ENST00000494268.1

MSL3-217, Transcript of MSL complex subunit 3, humanhuman

TSL 2

Gene MSL3, Length 1,124 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSL3-217ENST00000494268 EFCAB14O75071 495 aa8.44□□□□□ -1.06
MSL3-217ENST00000494268 MED14OSP0DP75 135 aa8.44□□□□□ -1.06
MSL3-217ENST00000494268 ATF2P15336 505 aa8.44□□□□□ -1.06
MSL3-217ENST00000494268 PMLP29590 882 aa8.44□□□□□ -1.06
MSL3-217ENST00000494268 MC3RP41968 323 aa8.44□□□□□ -1.06
MSL3-217ENST00000494268 OTOP3Q7RTS5 596 aa8.44□□□□□ -1.06
MSL3-217ENST00000494268 HOMER1Q86YM7 354 aa8.44□□□□□ -1.06
MSL3-217ENST00000494268 NLGN1Q8N2Q7 840 aa8.44□□□□□ -1.06
MSL3-217ENST00000494268 SLC6A20Q9NP91 592 aa8.44□□□□□ -1.06
MSL3-217ENST00000494268 PYGMP11217 842 aa8.43□□□□□ -1.06
MSL3-217ENST00000494268 GNAT1P11488 350 aa8.43□□□□□ -1.06
MSL3-217ENST00000494268 FNDC3BQ53EP0 1204 aaKnown RBP8.43□□□□□ -1.06
MSL3-217ENST00000494268 EMC4Q5J8M3 183 aa8.43□□□□□ -1.06
MSL3-217ENST00000494268 ZC3H7AQ8IWR0 971 aaKnown RBP8.43□□□□□ -1.06
MSL3-217ENST00000494268 ARRDC4Q8NCT1 418 aa8.43□□□□□ -1.06
MSL3-217ENST00000494268 APPBP2Q92624 585 aa8.43□□□□□ -1.06
MSL3-217ENST00000494268 PPP1R16BQ96T49 567 aa8.43□□□□□ -1.06
MSL3-217ENST00000494268 KRTAP9-2Q9BYQ4 174 aa8.43□□□□□ -1.06
MSL3-217ENST00000494268 CD2APQ9Y5K6 639 aa8.43□□□□□ -1.06
MSL3-217ENST00000494268 TCRBV5S4A2TA0A5A2 114 aa8.42□□□□□ -1.06
MSL3-217ENST00000494268 TCRBV16S1A1N1A0A5B0 115 aa8.42□□□□□ -1.06
MSL3-217ENST00000494268 SLC27A2O14975 620 aa8.42□□□□□ -1.06
MSL3-217ENST00000494268 BUB1BO60566 1050 aaPredicted RBP8.42□□□□□ -1.06
MSL3-217ENST00000494268 TSPAN15O95858 294 aa8.42□□□□□ -1.06
MSL3-217ENST00000494268 KCNA6P17658 529 aa8.42□□□□□ -1.06
MSL3-217ENST00000494268 RAP1GAPP47736 663 aa8.42□□□□□ -1.06
MSL3-217ENST00000494268 SSPNQ14714 243 aa8.42□□□□□ -1.06
MSL3-217ENST00000494268 PKN1Q16512 942 aa8.42□□□□□ -1.06
MSL3-217ENST00000494268 C16orf86Q6ZW13 317 aa8.42□□□□□ -1.06
MSL3-217ENST00000494268 BHLHE22Q8NFJ8 381 aaPredicted RBP8.42□□□□□ -1.06
MSL3-217ENST00000494268 CD320Q9NPF0 282 aa8.42□□□□□ -1.06
MSL3-217ENST00000494268 TCRBV5S2A0A599 114 aa8.41□□□□□ -1.06
MSL3-217ENST00000494268 TCAF2A6NFQ2 919 aa8.41□□□□□ -1.06
MSL3-217ENST00000494268 CDC45O75419 566 aa8.41□□□□□ -1.06
MSL3-217ENST00000494268 NCAM1P13591 858 aa8.41□□□□□ -1.06
MSL3-217ENST00000494268 SDSP20132 328 aa8.41□□□□□ -1.06
MSL3-217ENST00000494268 IGFBP6P24592 240 aaPredicted RBP8.41□□□□□ -1.06
MSL3-217ENST00000494268 DNM2P50570 870 aa8.41□□□□□ -1.06
MSL3-217ENST00000494268 SPIRE1Q08AE8 756 aa8.41□□□□□ -1.06
MSL3-217ENST00000494268 PABPC4Q13310 644 aaKnown RBP eCLIP8.41□□□□□ -1.06
MSL3-217ENST00000494268 TCEA2Q15560 299 aa8.41□□□□□ -1.06
MSL3-217ENST00000494268 TARBP2Q15633 366 aaKnown RBP8.41□□□□□ -1.06
MSL3-217ENST00000494268 HABP4Q5JVS0 413 aaKnown RBP8.41□□□□□ -1.06
MSL3-217ENST00000494268 ABHD17CQ6PCB6 329 aa8.41□□□□□ -1.06
MSL3-217ENST00000494268 OSTM1Q86WC4 334 aa8.41□□□□□ -1.06
MSL3-217ENST00000494268 TMEFF1Q8IYR6 380 aa8.41□□□□□ -1.06
MSL3-217ENST00000494268 PANK1Q8TE04 598 aa8.41□□□□□ -1.06
MSL3-217ENST00000494268 CLEC4DQ8WXI8 215 aa8.41□□□□□ -1.06
MSL3-217ENST00000494268 FBXW5Q969U6 566 aa8.41□□□□□ -1.06
MSL3-217ENST00000494268 SYT3Q9BQG1 590 aa8.41□□□□□ -1.06
MSL3-217ENST00000494268 SMOC1Q9H4F8 434 aa8.41□□□□□ -1.06
MSL3-217ENST00000494268 CATSPERZQ9NTU4 200 aa8.41□□□□□ -1.06
MSL3-217ENST00000494268 CBLCQ9ULV8 474 aa8.41□□□□□ -1.06
MSL3-217ENST00000494268 ZNF652Q9Y2D9 606 aa8.41□□□□□ -1.06
MSL3-217ENST00000494268 COQ6Q9Y2Z9 468 aa8.41□□□□□ -1.06
MSL3-217ENST00000494268 PCDHB4Q9Y5E5 795 aa8.41□□□□□ -1.06
MSL3-217ENST00000494268 KRTAP9-1A8MXZ3 250 aaPredicted RBP8.4□□□□□ -1.06
MSL3-217ENST00000494268 NPIPB6E9PJ23 425 aa8.4□□□□□ -1.06
MSL3-217ENST00000494268 KRIT1O00522 736 aa8.4□□□□□ -1.06
MSL3-217ENST00000494268 IRS4O14654 1257 aaPredicted RBP8.4□□□□□ -1.06
MSL3-217ENST00000494268 WNT9AO14904 365 aa8.4□□□□□ -1.06
MSL3-217ENST00000494268 LTFP02788 710 aa8.4□□□□□ -1.06
MSL3-217ENST00000494268 CKMP06732 381 aa8.4□□□□□ -1.06
MSL3-217ENST00000494268 NAT1P18440 290 aa8.4□□□□□ -1.06
MSL3-217ENST00000494268 CHRNA2Q15822 529 aa8.4□□□□□ -1.06
MSL3-217ENST00000494268 AMIGO3Q86WK7 504 aa8.4□□□□□ -1.06
MSL3-217ENST00000494268 FAM26EQ8N5C1 309 aa8.4□□□□□ -1.06
MSL3-217ENST00000494268 SIGLEC10Q96LC7 697 aa8.4□□□□□ -1.06
MSL3-217ENST00000494268 EPB41L4AQ9HCS5 686 aaPredicted RBP8.4□□□□□ -1.06
MSL3-217ENST00000494268 MYOTQ9UBF9 498 aa8.4□□□□□ -1.06
MSL3-217ENST00000494268 CCDC66A2RUB6 948 aa8.39□□□□□ -1.07
MSL3-217ENST00000494268 DNAJC8O75937 253 aaPredicted RBP8.39□□□□□ -1.07
MSL3-217ENST00000494268 PFKLP17858 780 aa8.39□□□□□ -1.07
MSL3-217ENST00000494268 LIMS1P48059 325 aa8.39□□□□□ -1.07
MSL3-217ENST00000494268 GRIN1Q05586 938 aa8.39□□□□□ -1.07
MSL3-217ENST00000494268 C16orf59Q7L2K0 433 aa8.39□□□□□ -1.07
MSL3-217ENST00000494268 SH3RF2Q8TEC5 729 aa8.39□□□□□ -1.07
MSL3-217ENST00000494268 ASH2LQ9UBL3 628 aa8.39□□□□□ -1.07
MSL3-217ENST00000494268 DSEQ9UL01 958 aa8.39□□□□□ -1.07
MSL3-217ENST00000494268 CNOT6Q9ULM6 557 aaKnown RBP8.39□□□□□ -1.07
MSL3-217ENST00000494268 TELO2Q9Y4R8 837 aa8.39□□□□□ -1.07
MSL3-217ENST00000494268 TNPO3Q9Y5L0 923 aaKnown RBP8.39□□□□□ -1.07
MSL3-217ENST00000494268 IRAK3Q9Y616 596 aa8.39□□□□□ -1.07
MSL3-217ENST00000494268 PDE6AP16499 860 aa8.38□□□□□ -1.07
MSL3-217ENST00000494268 KRT15P19012 456 aa8.38□□□□□ -1.07
MSL3-217ENST00000494268 PI3P19957 117 aa8.38□□□□□ -1.07
MSL3-217ENST00000494268 STAT5AP42229 794 aa8.38□□□□□ -1.07
MSL3-217ENST00000494268 JAM2P57087 298 aa8.38□□□□□ -1.07
MSL3-217ENST00000494268 ST5P78524 1137 aa8.38□□□□□ -1.07
MSL3-217ENST00000494268 FOXO4P98177 505 aa8.38□□□□□ -1.07
MSL3-217ENST00000494268 CACNB2Q08289 660 aaPredicted RBP8.38□□□□□ -1.07
MSL3-217ENST00000494268 KCNA10Q16322 511 aa8.38□□□□□ -1.07
MSL3-217ENST00000494268 ARHGAP36Q6ZRI8 547 aa8.38□□□□□ -1.07
MSL3-217ENST00000494268 ANKLE2Q86XL3 938 aa8.38□□□□□ -1.07
MSL3-217ENST00000494268 MIB1Q86YT6 1006 aa8.38□□□□□ -1.07
MSL3-217ENST00000494268 CILP2Q8IUL8 1156 aa8.38□□□□□ -1.07
MSL3-217ENST00000494268 SYNPOQ8N3V7 929 aa8.38□□□□□ -1.07
MSL3-217ENST00000494268 UHMK1Q8TAS1 419 aaKnown RBP8.38□□□□□ -1.07
MSL3-217ENST00000494268 CD244Q9BZW8 370 aa8.38□□□□□ -1.07
MSL3-217ENST00000494268 RNF38Q9H0F5 515 aa8.38□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 25.6 ms