RNA–Protein interactions for RNA: ENST00000493521.5

SOX2-OT-215, SOX2 overlapping transcript, humanhuman

TSL 3 BASIC

Gene SOX2-OT, Length 1,239 nt, Biotype sense overlapping.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SOX2-OT-215ENST00000493521 MBTPS1Q14703 1052 aa11.81□□□□□ -0.52
SOX2-OT-215ENST00000493521 ARHGEF16Q5VV41 709 aa11.81□□□□□ -0.52
SOX2-OT-215ENST00000493521 RUFY3Q7L099 469 aa11.81□□□□□ -0.52
SOX2-OT-215ENST00000493521 MICALL1Q8N3F8 863 aa11.81□□□□□ -0.52
SOX2-OT-215ENST00000493521 IL27Q8NEV9 243 aa11.81□□□□□ -0.52
SOX2-OT-215ENST00000493521 NECAB3Q96P71 396 aaPredicted RBP11.81□□□□□ -0.52
SOX2-OT-215ENST00000493521 NEK1Q96PY6 1258 aa11.81□□□□□ -0.52
SOX2-OT-215ENST00000493521 PDCD2LQ9BRP1 358 aa11.81□□□□□ -0.52
SOX2-OT-215ENST00000493521 ALG1Q9BT22 464 aa11.81□□□□□ -0.52
SOX2-OT-215ENST00000493521 HDAC6Q9UBN7 1215 aa11.81□□□□□ -0.52
SOX2-OT-215ENST00000493521 RAPGEFL1Q9UHV5 662 aa11.81□□□□□ -0.52
SOX2-OT-215ENST00000493521 SLC4A7Q9Y6M7 1214 aa11.81□□□□□ -0.52
SOX2-OT-215ENST00000493521 TCF20Q9UGU0 1960 aaKnown RBP11.81□□□□□ -0.52
SOX2-OT-215ENST00000493521 COL4A4P53420 1690 aaPredicted RBP11.81□□□□□ -0.52
SOX2-OT-215ENST00000493521 LOC102724159A0A0B4J2E5 919 aa11.8□□□□□ -0.52
SOX2-OT-215ENST00000493521 E7EWF7 191 aa11.8□□□□□ -0.52
SOX2-OT-215ENST00000493521 GH1P01241 217 aa11.8□□□□□ -0.52
SOX2-OT-215ENST00000493521 ATP2A2P16615 1042 aaKnown RBP11.8□□□□□ -0.52
SOX2-OT-215ENST00000493521 RXRAP19793 462 aa11.8□□□□□ -0.52
SOX2-OT-215ENST00000493521 AK2P54819 239 aa11.8□□□□□ -0.52
SOX2-OT-215ENST00000493521 SEMA3FQ13275 785 aa11.8□□□□□ -0.52
SOX2-OT-215ENST00000493521 GRM4Q14833 912 aa11.8□□□□□ -0.52
SOX2-OT-215ENST00000493521 PWP2Q15269 919 aaKnown RBP11.8□□□□□ -0.52
SOX2-OT-215ENST00000493521 PTGISQ16647 500 aa11.8□□□□□ -0.52
SOX2-OT-215ENST00000493521 TRIM71Q2Q1W2 868 aaKnown RBP11.8□□□□□ -0.52
SOX2-OT-215ENST00000493521 HSDL1Q3SXM5 330 aa11.8□□□□□ -0.52
SOX2-OT-215ENST00000493521 PPP2R2DQ66LE6 453 aa11.8□□□□□ -0.52
SOX2-OT-215ENST00000493521 NFRKBQ6P4R8 1299 aa11.8□□□□□ -0.52
SOX2-OT-215ENST00000493521 BLOC1S2Q6QNY1 142 aa11.8□□□□□ -0.52
SOX2-OT-215ENST00000493521 CMTR1Q8N1G2 835 aaKnown RBP11.8□□□□□ -0.52
SOX2-OT-215ENST00000493521 NSUN6Q8TEA1 469 aaKnown RBP11.8□□□□□ -0.52
SOX2-OT-215ENST00000493521 UBAC1Q9BSL1 405 aa11.8□□□□□ -0.52
SOX2-OT-215ENST00000493521 KRT23Q9C075 422 aa11.8□□□□□ -0.52
SOX2-OT-215ENST00000493521 SLKQ9H2G2 1235 aaPredicted RBP11.8□□□□□ -0.52
SOX2-OT-215ENST00000493521 PDRG1Q9NUG6 133 aa11.8□□□□□ -0.52
SOX2-OT-215ENST00000493521 MSRAQ9UJ68 235 aa11.8□□□□□ -0.52
SOX2-OT-215ENST00000493521 MRPL11Q9Y3B7 192 aaKnown RBP11.8□□□□□ -0.52
SOX2-OT-215ENST00000493521 hCG_1642624A0A1W2PR95 340 aa11.79□□□□□ -0.52
SOX2-OT-215ENST00000493521 HAS3O00219 553 aa11.79□□□□□ -0.52
SOX2-OT-215ENST00000493521 ZBTB5O15062 677 aa11.79□□□□□ -0.52
SOX2-OT-215ENST00000493521 NKRFO15226 690 aaKnown RBP eCLIP11.79□□□□□ -0.52
SOX2-OT-215ENST00000493521 RPS6KB1P23443 525 aa11.79□□□□□ -0.52
SOX2-OT-215ENST00000493521 PSEN2P49810 448 aa11.79□□□□□ -0.52
SOX2-OT-215ENST00000493521 MRPS9P82933 396 aaKnown RBP11.79□□□□□ -0.52
SOX2-OT-215ENST00000493521 GHRHRQ02643 423 aa11.79□□□□□ -0.52
SOX2-OT-215ENST00000493521 TAP1Q03518 808 aa11.79□□□□□ -0.52
SOX2-OT-215ENST00000493521 TROAPQ12815 778 aa11.79□□□□□ -0.52
SOX2-OT-215ENST00000493521 PGM5Q15124 567 aa11.79□□□□□ -0.52
SOX2-OT-215ENST00000493521 STXBP2Q15833 593 aa11.79□□□□□ -0.52
SOX2-OT-215ENST00000493521 FCHSD1Q86WN1 690 aa11.79□□□□□ -0.52
SOX2-OT-215ENST00000493521 MB21D2Q8IYB1 491 aaPredicted RBP11.79□□□□□ -0.52
SOX2-OT-215ENST00000493521 IGDCC4Q8TDY8 1250 aa11.79□□□□□ -0.52
SOX2-OT-215ENST00000493521 GAS2L1Q99501 681 aaPredicted RBP11.79□□□□□ -0.52
SOX2-OT-215ENST00000493521 AMNQ9BXJ7 453 aa11.79□□□□□ -0.52
SOX2-OT-215ENST00000493521 RIOX1Q9H6W3 641 aa11.79□□□□□ -0.52
SOX2-OT-215ENST00000493521 SLC28A3Q9HAS3 691 aa11.79□□□□□ -0.52
SOX2-OT-215ENST00000493521 PCDHA1Q9Y5I3 950 aa11.79□□□□□ -0.52
SOX2-OT-215ENST00000493521 MRVI1Q9Y6F6 885 aa11.79□□□□□ -0.52
SOX2-OT-215ENST00000493521 IFIT3O14879 490 aaKnown RBP11.78□□□□□ -0.52
SOX2-OT-215ENST00000493521 PLEKHA8P1O95397 391 aa11.78□□□□□ -0.52
SOX2-OT-215ENST00000493521 HSP90AA1P07900 732 aaKnown RBP11.78□□□□□ -0.52
SOX2-OT-215ENST00000493521 CKBP12277 381 aa11.78□□□□□ -0.52
SOX2-OT-215ENST00000493521 UBA1P22314 1058 aaKnown RBP11.78□□□□□ -0.52
SOX2-OT-215ENST00000493521 MFSD10Q14728 455 aa11.78□□□□□ -0.52
SOX2-OT-215ENST00000493521 RAB30Q15771 203 aa11.78□□□□□ -0.52
SOX2-OT-215ENST00000493521 KIAA0753Q2KHM9 967 aa11.78□□□□□ -0.52
SOX2-OT-215ENST00000493521 ZNF618Q5T7W0 954 aa11.78□□□□□ -0.52
SOX2-OT-215ENST00000493521 MYSM1Q5VVJ2 828 aa11.78□□□□□ -0.52
SOX2-OT-215ENST00000493521 TMX3Q96JJ7 454 aa11.78□□□□□ -0.52
SOX2-OT-215ENST00000493521 TCEANC2Q96MN5 208 aa11.78□□□□□ -0.52
SOX2-OT-215ENST00000493521 LRRC2Q9BYS8 371 aa11.78□□□□□ -0.52
SOX2-OT-215ENST00000493521 FTOQ9C0B1 505 aaKnown RBP eCLIP11.78□□□□□ -0.52
SOX2-OT-215ENST00000493521 RTEL1Q9NZ71 1219 aa11.78□□□□□ -0.52
SOX2-OT-215ENST00000493521 GTF2IRD1Q9UHL9 959 aa11.78□□□□□ -0.52
SOX2-OT-215ENST00000493521 PCDHA11Q9Y5I1 949 aa11.78□□□□□ -0.52
SOX2-OT-215ENST00000493521 PRRC2BQ5JSZ5 2229 aaKnown RBP11.77□□□□□ -0.53
SOX2-OT-215ENST00000493521 LPXNO60711 386 aa11.77□□□□□ -0.53
SOX2-OT-215ENST00000493521 GGPS1O95749 300 aa11.77□□□□□ -0.53
SOX2-OT-215ENST00000493521 F2P00734 622 aa11.77□□□□□ -0.53
SOX2-OT-215ENST00000493521 HMGB1P09429 215 aaKnown RBP11.77□□□□□ -0.53
SOX2-OT-215ENST00000493521 SUPT20HL2P0C7V6 817 aa11.77□□□□□ -0.53
SOX2-OT-215ENST00000493521 KCNQ1P51787 676 aa11.77□□□□□ -0.53
SOX2-OT-215ENST00000493521 WDR5P61964 334 aaKnown RBP11.77□□□□□ -0.53
SOX2-OT-215ENST00000493521 CCDC178Q5BJE1 867 aa11.77□□□□□ -0.53
SOX2-OT-215ENST00000493521 CELF3Q5SZQ8 465 aaKnown RBP11.77□□□□□ -0.53
SOX2-OT-215ENST00000493521 USP17L6PQ6QN14 398 aa11.77□□□□□ -0.53
SOX2-OT-215ENST00000493521 LIN28BQ6ZN17 250 aaKnown RBP eCLIP11.77□□□□□ -0.53
SOX2-OT-215ENST00000493521 VSIG10LQ86VR7 867 aa11.77□□□□□ -0.53
SOX2-OT-215ENST00000493521 SESTD1Q86VW0 696 aa11.77□□□□□ -0.53
SOX2-OT-215ENST00000493521 TRIM50Q86XT4 487 aa11.77□□□□□ -0.53
SOX2-OT-215ENST00000493521 MCF2L2Q86YR7 1114 aa11.77□□□□□ -0.53
SOX2-OT-215ENST00000493521 HERC6Q8IVU3 1022 aa11.77□□□□□ -0.53
SOX2-OT-215ENST00000493521 RPUSD2Q8IZ73 545 aaKnown RBP11.77□□□□□ -0.53
SOX2-OT-215ENST00000493521 ARNTL2Q8WYA1 636 aa11.77□□□□□ -0.53
SOX2-OT-215ENST00000493521 IWS1Q96ST2 819 aa11.77□□□□□ -0.53
SOX2-OT-215ENST00000493521 LARP6Q9BRS8 491 aaKnown RBP11.77□□□□□ -0.53
SOX2-OT-215ENST00000493521 C16orf70Q9BSU1 422 aa11.77□□□□□ -0.53
SOX2-OT-215ENST00000493521 CNNM2Q9H8M5 875 aa11.77□□□□□ -0.53
SOX2-OT-215ENST00000493521 LY9Q9HBG7 655 aa11.77□□□□□ -0.53
SOX2-OT-215ENST00000493521 MTCH2Q9Y6C9 303 aa11.77□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 27.1 ms