RNA–Protein interactions for RNA: ENST00000491881.1

VTA1-204, Transcript of vesicle trafficking 1, humanhuman

TSL 2

Gene VTA1, Length 528 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VTA1-204ENST00000491881 SRGAP3O43295 1099 aa5.71□□□□□ -1.5
VTA1-204ENST00000491881 CLSTN1O94985 981 aa5.71□□□□□ -1.5
VTA1-204ENST00000491881 CAPNS1P04632 268 aa5.71□□□□□ -1.5
VTA1-204ENST00000491881 PLS3P13797 630 aa5.71□□□□□ -1.5
VTA1-204ENST00000491881 BICRALQ6AI39 1079 aa5.71□□□□□ -1.5
VTA1-204ENST00000491881 USP53Q70EK8 1073 aa5.71□□□□□ -1.5
VTA1-204ENST00000491881 SAPCD2Q86UD0 394 aa5.71□□□□□ -1.5
VTA1-204ENST00000491881 ZNF526Q8TF50 670 aaPredicted RBP5.71□□□□□ -1.5
VTA1-204ENST00000491881 DBR1Q9UK59 544 aaKnown RBP5.71□□□□□ -1.5
VTA1-204ENST00000491881 HCFC2Q9Y5Z7 792 aa5.71□□□□□ -1.5
VTA1-204ENST00000491881 SHROOM4Q9ULL8 1493 aa5.71□□□□□ -1.5
VTA1-204ENST00000491881 LOC105371045A0A1W2PR82 267 aa5.7□□□□□ -1.5
VTA1-204ENST00000491881 ASMTLO95671 621 aa5.7□□□□□ -1.5
VTA1-204ENST00000491881 ATF2P15336 505 aa5.7□□□□□ -1.5
VTA1-204ENST00000491881 FBLN1P23142 703 aa5.7□□□□□ -1.5
VTA1-204ENST00000491881 HSD3B2P26439 372 aa5.7□□□□□ -1.5
VTA1-204ENST00000491881 TCEA2Q15560 299 aa5.7□□□□□ -1.5
VTA1-204ENST00000491881 TAF7LQ5H9L4 462 aa5.7□□□□□ -1.5
VTA1-204ENST00000491881 SLC35F1Q5T1Q4 408 aa5.7□□□□□ -1.5
VTA1-204ENST00000491881 E4F1Q66K89 784 aaPredicted RBP5.7□□□□□ -1.5
VTA1-204ENST00000491881 IQCEQ6IPM2 695 aa5.7□□□□□ -1.5
VTA1-204ENST00000491881 C16orf86Q6ZW13 317 aa5.7□□□□□ -1.5
VTA1-204ENST00000491881 SYNPOQ8N3V7 929 aa5.7□□□□□ -1.5
VTA1-204ENST00000491881 NPLOC4Q8TAT6 608 aa5.7□□□□□ -1.5
VTA1-204ENST00000491881 FRS2Q8WU20 508 aa5.7□□□□□ -1.5
VTA1-204ENST00000491881 DDX1Q92499 740 aaKnown RBP5.7□□□□□ -1.5
VTA1-204ENST00000491881 RNF38Q9H0F5 515 aa5.7□□□□□ -1.5
VTA1-204ENST00000491881 BLACEA4D250 179 aa5.69□□□□□ -1.5
VTA1-204ENST00000491881 SH3D21A4FU49 640 aa5.69□□□□□ -1.5
VTA1-204ENST00000491881 F8W031 263 aaPredicted RBP5.69□□□□□ -1.5
VTA1-204ENST00000491881 AKAP8O43823 692 aaKnown RBP5.69□□□□□ -1.5
VTA1-204ENST00000491881 APPP05067 770 aa5.69□□□□□ -1.5
VTA1-204ENST00000491881 NCAM1P13591 858 aa5.69□□□□□ -1.5
VTA1-204ENST00000491881 CNR2P34972 360 aa5.69□□□□□ -1.5
VTA1-204ENST00000491881 ADAM17P78536 824 aa5.69□□□□□ -1.5
VTA1-204ENST00000491881 HTRA3P83110 453 aa5.69□□□□□ -1.5
VTA1-204ENST00000491881 ZXDAP98168 799 aa5.69□□□□□ -1.5
VTA1-204ENST00000491881 CYP4F3Q08477 520 aa5.69□□□□□ -1.5
VTA1-204ENST00000491881 KCNAB2Q13303 367 aa5.69□□□□□ -1.5
VTA1-204ENST00000491881 ACBD5Q5T8D3 534 aaPredicted RBP5.69□□□□□ -1.5
VTA1-204ENST00000491881 DIO2Q92813 273 aa5.69□□□□□ -1.5
VTA1-204ENST00000491881 KISS1RQ969F8 398 aaPredicted RBP5.69□□□□□ -1.5
VTA1-204ENST00000491881 C1orf159Q96HA4 380 aa5.69□□□□□ -1.5
VTA1-204ENST00000491881 SLKQ9H2G2 1235 aaPredicted RBP5.69□□□□□ -1.5
VTA1-204ENST00000491881 PDLIM7Q9NR12 457 aa5.69□□□□□ -1.5
VTA1-204ENST00000491881 SMPD4Q9NXE4 827 aa5.69□□□□□ -1.5
VTA1-204ENST00000491881 PLA2G2DQ9UNK4 145 aa5.69□□□□□ -1.5
VTA1-204ENST00000491881 DUSP10Q9Y6W6 482 aa5.69□□□□□ -1.5
VTA1-204ENST00000491881 PPP1R12AO14974 1030 aaPredicted RBP5.68□□□□□ -1.5
VTA1-204ENST00000491881 MYO1BO43795 1136 aa5.68□□□□□ -1.5
VTA1-204ENST00000491881 TNFRSF1AP19438 455 aa5.68□□□□□ -1.5
VTA1-204ENST00000491881 LTBRP36941 435 aa5.68□□□□□ -1.5
VTA1-204ENST00000491881 GJA9P57773 515 aa5.68□□□□□ -1.5
VTA1-204ENST00000491881 GABREP78334 506 aa5.68□□□□□ -1.5
VTA1-204ENST00000491881 PRR5P85299 388 aa5.68□□□□□ -1.5
VTA1-204ENST00000491881 RBM10P98175 930 aaKnown RBP5.68□□□□□ -1.5
VTA1-204ENST00000491881 CPNE8Q86YQ8 564 aa5.68□□□□□ -1.5
VTA1-204ENST00000491881 KREMEN2Q8NCW0 462 aa5.68□□□□□ -1.5
VTA1-204ENST00000491881 DCAF4Q8WV16 495 aa5.68□□□□□ -1.5
VTA1-204ENST00000491881 PTPRN2Q92932 1015 aa5.68□□□□□ -1.5
VTA1-204ENST00000491881 MMP19Q99542 508 aa5.68□□□□□ -1.5
VTA1-204ENST00000491881 FEZ1Q99689 392 aa5.68□□□□□ -1.5
VTA1-204ENST00000491881 NCOA5Q9HCD5 579 aaKnown RBP5.68□□□□□ -1.5
VTA1-204ENST00000491881 SFMBT1Q9UHJ3 866 aa5.68□□□□□ -1.5
VTA1-204ENST00000491881 TACR1P25103 407 aa5.67□□□□□ -1.5
VTA1-204ENST00000491881 MC3RP41968 323 aa5.67□□□□□ -1.5
VTA1-204ENST00000491881 DENND5AQ6IQ26 1287 aa5.67□□□□□ -1.5
VTA1-204ENST00000491881 MAMDC2Q7Z304 686 aaPredicted RBP5.67□□□□□ -1.5
VTA1-204ENST00000491881 CARFQ8N187 725 aa5.67□□□□□ -1.5
VTA1-204ENST00000491881 PHF20Q9BVI0 1012 aa5.67□□□□□ -1.5
VTA1-204ENST00000491881 GPR27Q9NS67 375 aa5.67□□□□□ -1.5
VTA1-204ENST00000491881 NDOR1Q9UHB4 597 aa5.67□□□□□ -1.5
VTA1-204ENST00000491881 CD2APQ9Y5K6 639 aa5.67□□□□□ -1.5
VTA1-204ENST00000491881 PLD2O14939 933 aa5.66□□□□□ -1.5
VTA1-204ENST00000491881 NOBOXO60393 691 aa5.66□□□□□ -1.5
VTA1-204ENST00000491881 NPHS1O60500 1241 aa5.66□□□□□ -1.5
VTA1-204ENST00000491881 EFCAB14O75071 495 aa5.66□□□□□ -1.5
VTA1-204ENST00000491881 RAPGEF3O95398 923 aa5.66□□□□□ -1.5
VTA1-204ENST00000491881 ITGB3P05106 788 aa5.66□□□□□ -1.5
VTA1-204ENST00000491881 CANXP27824 592 aaKnown RBP5.66□□□□□ -1.5
VTA1-204ENST00000491881 TESK1Q15569 626 aa5.66□□□□□ -1.5
VTA1-204ENST00000491881 NTRK3Q16288 839 aa5.66□□□□□ -1.5
VTA1-204ENST00000491881 PLEKHG4Q58EX7 1191 aa5.66□□□□□ -1.5
VTA1-204ENST00000491881 STYK1Q6J9G0 422 aa5.66□□□□□ -1.5
VTA1-204ENST00000491881 RSPO2Q6UXX9 243 aaPredicted RBP5.66□□□□□ -1.5
VTA1-204ENST00000491881 CCDC103Q8IW40 242 aa5.66□□□□□ -1.5
VTA1-204ENST00000491881 ALG3Q92685 438 aa5.66□□□□□ -1.5
VTA1-204ENST00000491881 MRPL4Q9BYD3 311 aaKnown RBP5.66□□□□□ -1.5
VTA1-204ENST00000491881 BTG4Q9NY30 223 aa5.66□□□□□ -1.5
VTA1-204ENST00000491881 SRRDQ9UH36 339 aa5.66□□□□□ -1.5
VTA1-204ENST00000491881 TMEFF2Q9UIK5 374 aaPredicted RBP5.66□□□□□ -1.5
VTA1-204ENST00000491881 C7orf72A4D263 438 aa5.65□□□□□ -1.5
VTA1-204ENST00000491881 AQP7O14520 342 aa5.65□□□□□ -1.5
VTA1-204ENST00000491881 MATN3O15232 486 aa5.65□□□□□ -1.5
VTA1-204ENST00000491881 SUV39H1O43463 412 aa5.65□□□□□ -1.5
VTA1-204ENST00000491881 ASGR2P07307 311 aa5.65□□□□□ -1.5
VTA1-204ENST00000491881 C6orf222P0C671 652 aaPredicted RBP5.65□□□□□ -1.5
VTA1-204ENST00000491881 CORO7P57737 925 aa5.65□□□□□ -1.5
VTA1-204ENST00000491881 RPL11P62913 178 aaKnown RBP5.65□□□□□ -1.5
VTA1-204ENST00000491881 DLX2Q07687 328 aaPredicted RBP5.65□□□□□ -1.5
Retrieved 100 of 20,778 RNA–protein pairs in 17.7 ms