RNA–Protein interactions for RNA: ENST00000491581.5

HDAC3-211, Transcript of histone deacetylase 3, humanhuman

TSL 3

Gene HDAC3, Length 777 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC3-211ENST00000491581 MICALL1Q8N3F8 863 aa10.33□□□□□ -0.76
HDAC3-211ENST00000491581 RUFY2Q8WXA3 655 aa10.33□□□□□ -0.76
HDAC3-211ENST00000491581 ZBTB10Q96DT7 871 aa10.33□□□□□ -0.76
HDAC3-211ENST00000491581 PGBD1Q96JS3 809 aa10.33□□□□□ -0.76
HDAC3-211ENST00000491581 PKD2L1Q9P0L9 805 aa10.33□□□□□ -0.76
HDAC3-211ENST00000491581 TCF20Q9UGU0 1960 aaKnown RBP10.33□□□□□ -0.76
HDAC3-211ENST00000491581 SPTBN5Q9NRC6 3674 aaKnown RBP10.32□□□□□ -0.76
HDAC3-211ENST00000491581 CHD7Q9P2D1 2997 aa10.32□□□□□ -0.76
HDAC3-211ENST00000491581 SH2B2O14492 632 aaPredicted RBP10.32□□□□□ -0.76
HDAC3-211ENST00000491581 NKRFO15226 690 aaKnown RBP eCLIP10.32□□□□□ -0.76
HDAC3-211ENST00000491581 NBNO60934 754 aa10.32□□□□□ -0.76
HDAC3-211ENST00000491581 PPFIA3O75145 1194 aa10.32□□□□□ -0.76
HDAC3-211ENST00000491581 EIF3JO75822 258 aaKnown RBP10.32□□□□□ -0.76
HDAC3-211ENST00000491581 ATP2A2P16615 1042 aaKnown RBP10.32□□□□□ -0.76
HDAC3-211ENST00000491581 MFSD10Q14728 455 aa10.32□□□□□ -0.76
HDAC3-211ENST00000491581 NECTIN1Q15223 517 aa10.32□□□□□ -0.76
HDAC3-211ENST00000491581 KIAA0753Q2KHM9 967 aa10.32□□□□□ -0.76
HDAC3-211ENST00000491581 FAM117BQ6P1L5 589 aa10.32□□□□□ -0.76
HDAC3-211ENST00000491581 NFRKBQ6P4R8 1299 aa10.32□□□□□ -0.76
HDAC3-211ENST00000491581 TRAF7Q6Q0C0 670 aa10.32□□□□□ -0.76
HDAC3-211ENST00000491581 VSIG10LQ86VR7 867 aa10.32□□□□□ -0.76
HDAC3-211ENST00000491581 DHX37Q8IY37 1157 aaKnown RBP10.32□□□□□ -0.76
HDAC3-211ENST00000491581 RASEFQ8IZ41 740 aa10.32□□□□□ -0.76
HDAC3-211ENST00000491581 UIMC1Q96RL1 719 aa10.32□□□□□ -0.76
HDAC3-211ENST00000491581 IWS1Q96ST2 819 aa10.32□□□□□ -0.76
HDAC3-211ENST00000491581 C16orf70Q9BSU1 422 aa10.32□□□□□ -0.76
HDAC3-211ENST00000491581 FTOQ9C0B1 505 aaKnown RBP eCLIP10.32□□□□□ -0.76
HDAC3-211ENST00000491581 ANO2Q9NQ90 1003 aa10.32□□□□□ -0.76
HDAC3-211ENST00000491581 SLC4A7Q9Y6M7 1214 aa10.32□□□□□ -0.76
HDAC3-211ENST00000491581 LOC102724159A0A0B4J2E5 919 aa10.31□□□□□ -0.76
HDAC3-211ENST00000491581 PNMA6FA0A0J9YX94 578 aa10.31□□□□□ -0.76
HDAC3-211ENST00000491581 ERICH2A1L162 156 aa10.31□□□□□ -0.76
HDAC3-211ENST00000491581 GCOM1H8Y6P7 765 aaPredicted RBP10.31□□□□□ -0.76
HDAC3-211ENST00000491581 HAS3O00219 553 aa10.31□□□□□ -0.76
HDAC3-211ENST00000491581 MEIS2O14770 477 aa10.31□□□□□ -0.76
HDAC3-211ENST00000491581 DTNBO60941 627 aa10.31□□□□□ -0.76
HDAC3-211ENST00000491581 ATP9AO75110 1047 aa10.31□□□□□ -0.76
HDAC3-211ENST00000491581 POLR2MP0CAP2 368 aa10.31□□□□□ -0.76
HDAC3-211ENST00000491581 CKBP12277 381 aa10.31□□□□□ -0.76
HDAC3-211ENST00000491581 GHRHRQ02643 423 aa10.31□□□□□ -0.76
HDAC3-211ENST00000491581 PWP2Q15269 919 aaKnown RBP10.31□□□□□ -0.76
HDAC3-211ENST00000491581 TRIM71Q2Q1W2 868 aaKnown RBP10.31□□□□□ -0.76
HDAC3-211ENST00000491581 CELF3Q5SZQ8 465 aaKnown RBP10.31□□□□□ -0.76
HDAC3-211ENST00000491581 ZNF618Q5T7W0 954 aa10.31□□□□□ -0.76
HDAC3-211ENST00000491581 PPP2R2DQ66LE6 453 aa10.31□□□□□ -0.76
HDAC3-211ENST00000491581 TYW1BQ6NUM6 668 aa10.31□□□□□ -0.76
HDAC3-211ENST00000491581 NFXL1Q6ZNB6 911 aa10.31□□□□□ -0.76
HDAC3-211ENST00000491581 CATIPQ7Z7H3 387 aa10.31□□□□□ -0.76
HDAC3-211ENST00000491581 SPATA33Q96N06 139 aa10.31□□□□□ -0.76
HDAC3-211ENST00000491581 GTF2IRD1Q9UHL9 959 aa10.31□□□□□ -0.76
HDAC3-211ENST00000491581 BRPF3Q9ULD4 1205 aa10.31□□□□□ -0.76
HDAC3-211ENST00000491581 NOD1Q9Y239 953 aa10.31□□□□□ -0.76
HDAC3-211ENST00000491581 ATG2AQ2TAZ0 1938 aa10.31□□□□□ -0.76
HDAC3-211ENST00000491581 MICAL3Q7RTP6 2002 aa10.3□□□□□ -0.76
HDAC3-211ENST00000491581 F2P00734 622 aa10.3□□□□□ -0.76
HDAC3-211ENST00000491581 CTSHP09668 335 aa10.3□□□□□ -0.76
HDAC3-211ENST00000491581 SUPT20HL2P0C7V6 817 aa10.3□□□□□ -0.76
HDAC3-211ENST00000491581 CASTP20810 708 aaKnown RBP10.3□□□□□ -0.76
HDAC3-211ENST00000491581 CCND2P30279 289 aa10.3□□□□□ -0.76
HDAC3-211ENST00000491581 TFF2Q03403 129 aa10.3□□□□□ -0.76
HDAC3-211ENST00000491581 DGKDQ16760 1214 aa10.3□□□□□ -0.76
HDAC3-211ENST00000491581 UTP14CQ5TAP6 766 aaKnown RBP10.3□□□□□ -0.76
HDAC3-211ENST00000491581 LIN28BQ6ZN17 250 aaKnown RBP eCLIP10.3□□□□□ -0.76
HDAC3-211ENST00000491581 LRRC8DQ7L1W4 858 aa10.3□□□□□ -0.76
HDAC3-211ENST00000491581 CYFIP1Q7L576 1253 aa10.3□□□□□ -0.76
HDAC3-211ENST00000491581 MICU3Q86XE3 530 aa10.3□□□□□ -0.76
HDAC3-211ENST00000491581 C7orf31Q8N865 590 aa10.3□□□□□ -0.76
HDAC3-211ENST00000491581 PPTC7Q8NI37 304 aa10.3□□□□□ -0.76
HDAC3-211ENST00000491581 NECAB3Q96P71 396 aaPredicted RBP10.3□□□□□ -0.76
HDAC3-211ENST00000491581 MPHOSPH6Q99547 160 aaKnown RBP10.3□□□□□ -0.76
HDAC3-211ENST00000491581 SLC28A3Q9HAS3 691 aa10.3□□□□□ -0.76
HDAC3-211ENST00000491581 MSRAQ9UJ68 235 aa10.3□□□□□ -0.76
HDAC3-211ENST00000491581 PNMA2Q9UL42 364 aa10.3□□□□□ -0.76
HDAC3-211ENST00000491581 MTUS1Q9ULD2 1270 aa10.3□□□□□ -0.76
HDAC3-211ENST00000491581 LOXHD1Q8IVV2 1947 aa10.3□□□□□ -0.76
HDAC3-211ENST00000491581 TREHO43280 583 aa10.29□□□□□ -0.76
HDAC3-211ENST00000491581 LGALS2P05162 132 aa10.29□□□□□ -0.76
HDAC3-211ENST00000491581 WDR5P61964 334 aaKnown RBP10.29□□□□□ -0.76
HDAC3-211ENST00000491581 TAP1Q03518 808 aa10.29□□□□□ -0.76
HDAC3-211ENST00000491581 LAMC2Q13753 1193 aa10.29□□□□□ -0.76
HDAC3-211ENST00000491581 BRDTQ58F21 947 aaPredicted RBP10.29□□□□□ -0.76
HDAC3-211ENST00000491581 HERC6Q8IVU3 1022 aa10.29□□□□□ -0.76
HDAC3-211ENST00000491581 RPUSD2Q8IZ73 545 aaKnown RBP10.29□□□□□ -0.76
HDAC3-211ENST00000491581 RETREG2Q8NC44 543 aa10.29□□□□□ -0.76
HDAC3-211ENST00000491581 ARNTL2Q8WYA1 636 aa10.29□□□□□ -0.76
HDAC3-211ENST00000491581 SETD4Q9NVD3 440 aa10.29□□□□□ -0.76
HDAC3-211ENST00000491581 TMEM260Q9NX78 707 aa10.29□□□□□ -0.76
HDAC3-211ENST00000491581 A0A0C4DFX4 3053 aa10.29□□□□□ -0.76
HDAC3-211ENST00000491581 FRMPD4Q14CM0 1322 aa10.29□□□□□ -0.76
HDAC3-211ENST00000491581 TMEM265A0A087WTH1 108 aa10.28□□□□□ -0.76
HDAC3-211ENST00000491581 CCDC69A6NI79 296 aa10.28□□□□□ -0.76
HDAC3-211ENST00000491581 B4DLN1 442 aa10.28□□□□□ -0.76
HDAC3-211ENST00000491581 SPATA31C2B4DYI2 1134 aa10.28□□□□□ -0.76
HDAC3-211ENST00000491581 KPNA6O60684 536 aa10.28□□□□□ -0.76
HDAC3-211ENST00000491581 SMIM10L2AP0DMW4 78 aa10.28□□□□□ -0.76
HDAC3-211ENST00000491581 SMIM10L2BP0DMW5 78 aa10.28□□□□□ -0.76
HDAC3-211ENST00000491581 HOXD8P13378 290 aaPredicted RBP10.28□□□□□ -0.76
HDAC3-211ENST00000491581 SELPP16109 830 aa10.28□□□□□ -0.76
HDAC3-211ENST00000491581 MARK3P27448 753 aa10.28□□□□□ -0.76
HDAC3-211ENST00000491581 MCM5P33992 734 aa10.28□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 18.4 ms