RNA–Protein interactions for RNA: ENST00000490140.1

FDPS-215, Transcript of farnesyl diphosphate synthase, humanhuman

TSL 2

Gene FDPS, Length 680 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FDPS-215ENST00000490140 MYCLP12524 364 aaPredicted RBP13.67□□□□□ -0.22
FDPS-215ENST00000490140 HOXD8P13378 290 aaPredicted RBP13.67□□□□□ -0.22
FDPS-215ENST00000490140 PLA2G5P39877 138 aa13.67□□□□□ -0.22
FDPS-215ENST00000490140 B4GALNT3Q6L9W6 998 aa13.67□□□□□ -0.22
FDPS-215ENST00000490140 PPP1R13LQ8WUF5 828 aa13.67□□□□□ -0.22
FDPS-215ENST00000490140 FAM122AQ96E09 287 aa13.67□□□□□ -0.22
FDPS-215ENST00000490140 SAMD11Q96NU1 681 aa13.67□□□□□ -0.22
FDPS-215ENST00000490140 ZSWIM5Q9P217 1185 aa13.67□□□□□ -0.22
FDPS-215ENST00000490140 INSL6Q9Y581 213 aa13.67□□□□□ -0.22
FDPS-215ENST00000490140 PCDHA1Q9Y5I3 950 aa13.67□□□□□ -0.22
FDPS-215ENST00000490140 SIP14410 1827 aa13.67□□□□□ -0.22
FDPS-215ENST00000490140 EPOPA6NHQ4 379 aa13.66□□□□□ -0.22
FDPS-215ENST00000490140 GCOM1H8Y6P7 765 aaPredicted RBP13.66□□□□□ -0.22
FDPS-215ENST00000490140 HAS3O00219 553 aa13.66□□□□□ -0.22
FDPS-215ENST00000490140 LGR5O75473 907 aa13.66□□□□□ -0.22
FDPS-215ENST00000490140 GGPS1O95749 300 aa13.66□□□□□ -0.22
FDPS-215ENST00000490140 POLR2MP0CAP2 368 aa13.66□□□□□ -0.22
FDPS-215ENST00000490140 GNAT1P11488 350 aa13.66□□□□□ -0.22
FDPS-215ENST00000490140 DEFB103AP81534 67 aa13.66□□□□□ -0.22
FDPS-215ENST00000490140 NUCB1Q02818 461 aa13.66□□□□□ -0.22
FDPS-215ENST00000490140 PTPROQ16827 1216 aa13.66□□□□□ -0.22
FDPS-215ENST00000490140 CELF3Q5SZQ8 465 aaKnown RBP13.66□□□□□ -0.22
FDPS-215ENST00000490140 MYSM1Q5VVJ2 828 aa13.66□□□□□ -0.22
FDPS-215ENST00000490140 STOX1Q6ZVD7 989 aa13.66□□□□□ -0.22
FDPS-215ENST00000490140 PLEKHM2Q8IWE5 1019 aa13.66□□□□□ -0.22
FDPS-215ENST00000490140 GDPD5Q8WTR4 605 aa13.66□□□□□ -0.22
FDPS-215ENST00000490140 TBC1D5Q92609 795 aa13.66□□□□□ -0.22
FDPS-215ENST00000490140 DHX38Q92620 1227 aaKnown RBP13.66□□□□□ -0.22
FDPS-215ENST00000490140 NECAB3Q96P71 396 aaPredicted RBP13.66□□□□□ -0.22
FDPS-215ENST00000490140 CTAGE1Q96RT6 745 aa13.66□□□□□ -0.22
FDPS-215ENST00000490140 PDCD2LQ9BRP1 358 aa13.66□□□□□ -0.22
FDPS-215ENST00000490140 MLXIPQ9HAP2 919 aa13.66□□□□□ -0.22
FDPS-215ENST00000490140 ARIH1Q9Y4X5 557 aaPredicted RBP13.66□□□□□ -0.22
FDPS-215ENST00000490140 MYH7BA7E2Y1 1941 aa13.66□□□□□ -0.22
FDPS-215ENST00000490140 PTPRSQ13332 1948 aa13.65□□□□□ -0.22
FDPS-215ENST00000490140 C17orf102A2RUQ5 167 aa13.65□□□□□ -0.22
FDPS-215ENST00000490140 RSPH10B2B2RC85 870 aa13.65□□□□□ -0.22
FDPS-215ENST00000490140 NBNO60934 754 aa13.65□□□□□ -0.22
FDPS-215ENST00000490140 RSPH10BP0C881 870 aa13.65□□□□□ -0.22
FDPS-215ENST00000490140 ERVK-21P61565 698 aa13.65□□□□□ -0.22
FDPS-215ENST00000490140 PGM5Q15124 567 aa13.65□□□□□ -0.22
FDPS-215ENST00000490140 ZNF618Q5T7W0 954 aa13.65□□□□□ -0.22
FDPS-215ENST00000490140 RALYLQ86SE5 291 aaKnown RBP13.65□□□□□ -0.22
FDPS-215ENST00000490140 SERINC5Q86VE9 423 aa13.65□□□□□ -0.22
FDPS-215ENST00000490140 RUFY2Q8WXA3 655 aa13.65□□□□□ -0.22
FDPS-215ENST00000490140 USP26Q9BXU7 913 aa13.65□□□□□ -0.22
FDPS-215ENST00000490140 ZNF215Q9UL58 517 aaPredicted RBP13.65□□□□□ -0.22
FDPS-215ENST00000490140 MTUS1Q9ULD2 1270 aa13.65□□□□□ -0.22
FDPS-215ENST00000490140 U3KPZ7 1027 aaPredicted RBP13.65□□□□□ -0.22
FDPS-215ENST00000490140 LCHNA4D1U4 455 aa13.64□□□□□ -0.23
FDPS-215ENST00000490140 LINC01553A4QN01 128 aa13.64□□□□□ -0.23
FDPS-215ENST00000490140 LPXNO60711 386 aa13.64□□□□□ -0.23
FDPS-215ENST00000490140 UBA1P22314 1058 aaKnown RBP13.64□□□□□ -0.23
FDPS-215ENST00000490140 THPOP40225 353 aa13.64□□□□□ -0.23
FDPS-215ENST00000490140 NEDD9Q14511 834 aa13.64□□□□□ -0.23
FDPS-215ENST00000490140 TIGD5Q53EQ6 642 aa13.64□□□□□ -0.23
FDPS-215ENST00000490140 TMEM31Q5JXX7 168 aa13.64□□□□□ -0.23
FDPS-215ENST00000490140 VSIG10LQ86VR7 867 aa13.64□□□□□ -0.23
FDPS-215ENST00000490140 HOMER1Q86YM7 354 aa13.64□□□□□ -0.23
FDPS-215ENST00000490140 FBXO22Q8NEZ5 403 aa13.64□□□□□ -0.23
FDPS-215ENST00000490140 SEPT8Q92599 483 aa13.64□□□□□ -0.23
FDPS-215ENST00000490140 APBB2Q92870 758 aa13.64□□□□□ -0.23
FDPS-215ENST00000490140 ATP6V0A1Q93050 837 aa13.64□□□□□ -0.23
FDPS-215ENST00000490140 MTMR8Q96EF0 704 aa13.64□□□□□ -0.23
FDPS-215ENST00000490140 FAM50BQ9Y247 325 aa13.64□□□□□ -0.23
FDPS-215ENST00000490140 MICAL3Q7RTP6 2002 aa13.64□□□□□ -0.23
FDPS-215ENST00000490140 H3BRB1 525 aa13.63□□□□□ -0.23
FDPS-215ENST00000490140 ARHGEF15O94989 841 aa13.63□□□□□ -0.23
FDPS-215ENST00000490140 HOXA13P31271 388 aaPredicted RBP13.63□□□□□ -0.23
FDPS-215ENST00000490140 TRIM71Q2Q1W2 868 aaKnown RBP13.63□□□□□ -0.23
FDPS-215ENST00000490140 PUS10Q3MIT2 529 aaKnown RBP13.63□□□□□ -0.23
FDPS-215ENST00000490140 HSDL1Q3SXM5 330 aa13.63□□□□□ -0.23
FDPS-215ENST00000490140 KRT40Q6A162 431 aa13.63□□□□□ -0.23
FDPS-215ENST00000490140 MYOCDQ8IZQ8 938 aa13.63□□□□□ -0.23
FDPS-215ENST00000490140 YME1L1Q96TA2 773 aa13.63□□□□□ -0.23
FDPS-215ENST00000490140 TUT1Q9H6E5 874 aaKnown RBP13.63□□□□□ -0.23
FDPS-215ENST00000490140 UBE2ZQ9H832 354 aaPredicted RBP13.63□□□□□ -0.23
FDPS-215ENST00000490140 SUGCTQ9HAC7 445 aa13.63□□□□□ -0.23
FDPS-215ENST00000490140 MAD2L2Q9UI95 211 aa13.63□□□□□ -0.23
FDPS-215ENST00000490140 COL4A6Q14031 1691 aa13.63□□□□□ -0.23
FDPS-215ENST00000490140 PNMA6FA0A0J9YX94 578 aa13.62□□□□□ -0.23
FDPS-215ENST00000490140 PALM3A6NDB9 673 aaPredicted RBP13.62□□□□□ -0.23
FDPS-215ENST00000490140 OPLAHO14841 1288 aa13.62□□□□□ -0.23
FDPS-215ENST00000490140 IFIT3O14879 490 aaKnown RBP13.62□□□□□ -0.23
FDPS-215ENST00000490140 FIBPO43427 364 aa13.62□□□□□ -0.23
FDPS-215ENST00000490140 GRM4Q14833 912 aa13.62□□□□□ -0.23
FDPS-215ENST00000490140 GPNMBQ14956 572 aa13.62□□□□□ -0.23
FDPS-215ENST00000490140 SEC23AQ15436 765 aa13.62□□□□□ -0.23
FDPS-215ENST00000490140 FAM117BQ6P1L5 589 aa13.62□□□□□ -0.23
FDPS-215ENST00000490140 XRRA1Q6P2D8 792 aa13.62□□□□□ -0.23
FDPS-215ENST00000490140 METTL7BQ6UX53 244 aa13.62□□□□□ -0.23
FDPS-215ENST00000490140 CATIPQ7Z7H3 387 aa13.62□□□□□ -0.23
FDPS-215ENST00000490140 STAG2Q8N3U4 1231 aa13.62□□□□□ -0.23
FDPS-215ENST00000490140 GIMAP8Q8ND71 665 aaPredicted RBP13.62□□□□□ -0.23
FDPS-215ENST00000490140 CUL5Q93034 780 aa13.62□□□□□ -0.23
FDPS-215ENST00000490140 RGS20O76081 388 aa13.61□□□□□ -0.23
FDPS-215ENST00000490140 LGALS2P05162 132 aa13.61□□□□□ -0.23
FDPS-215ENST00000490140 RPLP2P05387 115 aaKnown RBP13.61□□□□□ -0.23
FDPS-215ENST00000490140 SMIM10L2AP0DMW4 78 aa13.61□□□□□ -0.23
FDPS-215ENST00000490140 SMIM10L2BP0DMW5 78 aa13.61□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 42.5 ms