RNA–Protein interactions for RNA: ENST00000489485.5

CLDN11-209, Transcript of claudin 11, humanhuman

TSL 2

Gene CLDN11, Length 1,854 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN11-209ENST00000489485 SF3A1Q15459 793 aaKnown RBP16.15■□□□□ 0.18
CLDN11-209ENST00000489485 SLC9C1Q4G0N8 1177 aa16.15■□□□□ 0.18
CLDN11-209ENST00000489485 MOXD1Q6UVY6 613 aa16.15■□□□□ 0.18
CLDN11-209ENST00000489485 CLEC17AQ6ZS10 378 aa16.15■□□□□ 0.18
CLDN11-209ENST00000489485 SH3TC2Q8TF17 1288 aa16.15■□□□□ 0.18
CLDN11-209ENST00000489485 UIMC1Q96RL1 719 aa16.15■□□□□ 0.18
CLDN11-209ENST00000489485 JADE2Q9NQC1 790 aa16.15■□□□□ 0.18
CLDN11-209ENST00000489485 PRDM10Q9NQV6 1147 aa16.15■□□□□ 0.18
CLDN11-209ENST00000489485 PDGFCQ9NRA1 345 aa16.15■□□□□ 0.18
CLDN11-209ENST00000489485 KCNH7Q9NS40 1196 aa16.15■□□□□ 0.18
CLDN11-209ENST00000489485 MRVI1Q9Y6F6 885 aa16.15■□□□□ 0.18
CLDN11-209ENST00000489485 PRKAR2AP13861 404 aaKnown RBP16.14■□□□□ 0.17
CLDN11-209ENST00000489485 CNGA1P29973 690 aa16.14■□□□□ 0.17
CLDN11-209ENST00000489485 SETQ01105 290 aaPredicted RBP16.14■□□□□ 0.17
CLDN11-209ENST00000489485 ANO1Q5XXA6 986 aa16.14■□□□□ 0.17
CLDN11-209ENST00000489485 GPRASP2Q96D09 838 aa16.14■□□□□ 0.17
CLDN11-209ENST00000489485 KATNBL1Q9H079 304 aa16.14■□□□□ 0.17
CLDN11-209ENST00000489485 PKD2L1Q9P0L9 805 aa16.14■□□□□ 0.17
CLDN11-209ENST00000489485 MARCH6O60337 910 aa16.14■□□□□ 0.17
CLDN11-209ENST00000489485 NEMFO60524 1076 aa16.14■□□□□ 0.17
CLDN11-209ENST00000489485 INHAP05111 366 aa16.14■□□□□ 0.17
CLDN11-209ENST00000489485 ARP10275 920 aa16.14■□□□□ 0.17
CLDN11-209ENST00000489485 PKN2Q16513 984 aaKnown RBP16.14■□□□□ 0.17
CLDN11-209ENST00000489485 CCDC144BQ3MJ40 725 aa16.14■□□□□ 0.17
CLDN11-209ENST00000489485 Q4G0T1 1027 aa16.14■□□□□ 0.17
CLDN11-209ENST00000489485 ATL3Q6DD88 541 aa16.14■□□□□ 0.17
CLDN11-209ENST00000489485 TAPT1Q6NXT6 567 aa16.14■□□□□ 0.17
CLDN11-209ENST00000489485 FBXO46Q6PJ61 603 aaPredicted RBP16.14■□□□□ 0.17
CLDN11-209ENST00000489485 POTEDQ86YR6 584 aa16.14■□□□□ 0.17
CLDN11-209ENST00000489485 SCFD2Q8WU76 684 aa16.14■□□□□ 0.17
CLDN11-209ENST00000489485 CDHR1Q96JP9 859 aa16.14■□□□□ 0.17
CLDN11-209ENST00000489485 POLR3EQ9NVU0 708 aa16.14■□□□□ 0.17
CLDN11-209ENST00000489485 MAFGO15525 162 aa16.13■□□□□ 0.17
CLDN11-209ENST00000489485 ZNF865P0CJ78 1059 aaPredicted RBP16.13■□□□□ 0.17
CLDN11-209ENST00000489485 TXNP10599 105 aaKnown RBP16.13■□□□□ 0.17
CLDN11-209ENST00000489485 ADCYAP1R1P41586 468 aa16.13■□□□□ 0.17
CLDN11-209ENST00000489485 TTLL4Q14679 1199 aa16.13■□□□□ 0.17
CLDN11-209ENST00000489485 NIPA1Q7RTP0 329 aa16.13■□□□□ 0.17
CLDN11-209ENST00000489485 LENG9Q96B70 501 aa16.13■□□□□ 0.17
CLDN11-209ENST00000489485 SCAND2PQ9GZW5 306 aaPredicted RBP16.13■□□□□ 0.17
CLDN11-209ENST00000489485 EIF4ENIF1Q9NRA8 985 aaKnown RBP16.13■□□□□ 0.17
CLDN11-209ENST00000489485 BRCA2P51587 3418 aa16.13■□□□□ 0.17
CLDN11-209ENST00000489485 DOCK5Q9H7D0 1870 aa16.12■□□□□ 0.17
CLDN11-209ENST00000489485 CYBAP13498 195 aa16.12■□□□□ 0.17
CLDN11-209ENST00000489485 LY6KQ17RY6 165 aa16.12■□□□□ 0.17
CLDN11-209ENST00000489485 KCNV1Q6PIU1 500 aa16.12■□□□□ 0.17
CLDN11-209ENST00000489485 SPATA32Q96LK8 384 aa16.12■□□□□ 0.17
CLDN11-209ENST00000489485 MBOAT7Q96N66 472 aa16.12■□□□□ 0.17
CLDN11-209ENST00000489485 ZNF577Q9BSK1 485 aa16.12■□□□□ 0.17
CLDN11-209ENST00000489485 NRBP1Q9UHY1 535 aa16.12■□□□□ 0.17
CLDN11-209ENST00000489485 SPATA31C2B4DYI2 1134 aa16.12■□□□□ 0.17
CLDN11-209ENST00000489485 IPO5O00410 1097 aaKnown RBP16.12■□□□□ 0.17
CLDN11-209ENST00000489485 MSH4O15457 936 aa16.12■□□□□ 0.17
CLDN11-209ENST00000489485 MYCP01106 439 aaPredicted RBP16.12■□□□□ 0.17
CLDN11-209ENST00000489485 TGFB3P10600 412 aa16.12■□□□□ 0.17
CLDN11-209ENST00000489485 NASPP49321 788 aaPredicted RBP16.12■□□□□ 0.17
CLDN11-209ENST00000489485 PTGDRQ13258 359 aa16.12■□□□□ 0.17
CLDN11-209ENST00000489485 SEMA3FQ13275 785 aa16.12■□□□□ 0.17
CLDN11-209ENST00000489485 ORC2Q13416 577 aaPredicted RBP16.12■□□□□ 0.17
CLDN11-209ENST00000489485 STK38Q15208 465 aa16.12■□□□□ 0.17
CLDN11-209ENST00000489485 CALCRLQ16602 461 aa16.12■□□□□ 0.17
CLDN11-209ENST00000489485 LINC00301Q8NCQ3 95 aa16.12■□□□□ 0.17
CLDN11-209ENST00000489485 TRPV1Q8NER1 839 aa16.12■□□□□ 0.17
CLDN11-209ENST00000489485 GJA10Q969M2 543 aa16.12■□□□□ 0.17
CLDN11-209ENST00000489485 C11orf97A0A1B0GVM6 126 aaPredicted RBP16.11■□□□□ 0.17
CLDN11-209ENST00000489485 SORBS3O60504 671 aa16.11■□□□□ 0.17
CLDN11-209ENST00000489485 ATP9AO75110 1047 aa16.11■□□□□ 0.17
CLDN11-209ENST00000489485 ARIH2O95376 493 aa16.11■□□□□ 0.17
CLDN11-209ENST00000489485 CCND3P30281 292 aaPredicted RBP16.11■□□□□ 0.17
CLDN11-209ENST00000489485 ICAM3P32942 547 aa16.11■□□□□ 0.17
CLDN11-209ENST00000489485 SP2Q02086 613 aa16.11■□□□□ 0.17
CLDN11-209ENST00000489485 TNFAIP2Q03169 654 aa16.11■□□□□ 0.17
CLDN11-209ENST00000489485 TPRNQ4KMQ1 711 aa16.11■□□□□ 0.17
CLDN11-209ENST00000489485 TMEM63BQ5T3F8 832 aa16.11■□□□□ 0.17
CLDN11-209ENST00000489485 MAP3K21Q5TCX8 1036 aa16.11■□□□□ 0.17
CLDN11-209ENST00000489485 IQSEC1Q6DN90 963 aa16.11■□□□□ 0.17
CLDN11-209ENST00000489485 LEO1Q8WVC0 666 aaPredicted RBP16.11■□□□□ 0.17
CLDN11-209ENST00000489485 AGO4Q9HCK5 861 aaKnown RBP16.11■□□□□ 0.17
CLDN11-209ENST00000489485 DDX41Q9UJV9 622 aaKnown RBP16.11■□□□□ 0.17
CLDN11-209ENST00000489485 FAM184BQ9ULE4 1060 aa16.11■□□□□ 0.17
CLDN11-209ENST00000489485 CEP131Q9UPN4 1083 aa16.11■□□□□ 0.17
CLDN11-209ENST00000489485 AKR1A1P14550 325 aa16.1■□□□□ 0.17
CLDN11-209ENST00000489485 MARCKSP29966 332 aaPredicted RBP16.1■□□□□ 0.17
CLDN11-209ENST00000489485 SLC39A14Q15043 492 aa16.1■□□□□ 0.17
CLDN11-209ENST00000489485 PTPAQ15257 358 aa16.1■□□□□ 0.17
CLDN11-209ENST00000489485 CCDC62Q6P9F0 684 aa16.1■□□□□ 0.17
CLDN11-209ENST00000489485 TMEM60Q9H2L4 133 aa16.1■□□□□ 0.17
CLDN11-209ENST00000489485 HMX1Q9NP08 348 aaPredicted RBP16.1■□□□□ 0.17
CLDN11-209ENST00000489485 RCOR1Q9UKL0 485 aa16.1■□□□□ 0.17
CLDN11-209ENST00000489485 RBM47A0AV96 593 aaKnown RBP16.1■□□□□ 0.17
CLDN11-209ENST00000489485 DDX39AO00148 427 aaKnown RBP16.1■□□□□ 0.17
CLDN11-209ENST00000489485 PRPF40AO75400 957 aaKnown RBP16.1■□□□□ 0.17
CLDN11-209ENST00000489485 YEATS4O95619 227 aa16.1■□□□□ 0.17
CLDN11-209ENST00000489485 SMPD1P17405 629 aa16.1■□□□□ 0.17
CLDN11-209ENST00000489485 UBA1P22314 1058 aaKnown RBP16.1■□□□□ 0.17
CLDN11-209ENST00000489485 TXKP42681 527 aa16.1■□□□□ 0.17
CLDN11-209ENST00000489485 GJC2Q5T442 439 aaPredicted RBP16.1■□□□□ 0.17
CLDN11-209ENST00000489485 ETNPPLQ8TBG4 499 aa16.1■□□□□ 0.17
CLDN11-209ENST00000489485 KCNMB3Q9NPA1 279 aa16.1■□□□□ 0.17
CLDN11-209ENST00000489485 GOLGA6L22H0YM25 854 aa16.09■□□□□ 0.17
Retrieved 100 of 20,778 RNA–protein pairs in 16.9 ms