RNA–Protein interactions for RNA: ENST00000488905.1

HDAC6-231, Transcript of histone deacetylase 6, humanhuman

TSL 4

Gene HDAC6, Length 492 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-231ENST00000488905 IFIT3O14879 490 aaKnown RBP21.37■■□□□ 1.01
HDAC6-231ENST00000488905 CKBP12277 381 aa21.37■■□□□ 1.01
HDAC6-231ENST00000488905 WDR5P61964 334 aaKnown RBP21.37■■□□□ 1.01
HDAC6-231ENST00000488905 PTH1RQ03431 593 aa21.37■■□□□ 1.01
HDAC6-231ENST00000488905 TAP1Q03518 808 aa21.37■■□□□ 1.01
HDAC6-231ENST00000488905 TRAF1Q13077 416 aa21.37■■□□□ 1.01
HDAC6-231ENST00000488905 KCNV1Q6PIU1 500 aa21.37■■□□□ 1.01
HDAC6-231ENST00000488905 RALYLQ86SE5 291 aaKnown RBP21.37■■□□□ 1.01
HDAC6-231ENST00000488905 ADAMTS19Q8TE59 1207 aa21.37■■□□□ 1.01
HDAC6-231ENST00000488905 RUFY2Q8WXA3 655 aa21.37■■□□□ 1.01
HDAC6-231ENST00000488905 PIGSQ96S52 555 aa21.37■■□□□ 1.01
HDAC6-231ENST00000488905 RIOX1Q9H6W3 641 aa21.37■■□□□ 1.01
HDAC6-231ENST00000488905 RFXAPO00287 272 aa21.36■■□□□ 1.01
HDAC6-231ENST00000488905 GTPBP6O43824 516 aaPredicted RBP21.36■■□□□ 1.01
HDAC6-231ENST00000488905 TLL1O43897 1013 aa21.36■■□□□ 1.01
HDAC6-231ENST00000488905 GGPS1O95749 300 aa21.36■■□□□ 1.01
HDAC6-231ENST00000488905 CXCL10P02778 98 aa21.36■■□□□ 1.01
HDAC6-231ENST00000488905 POU3F3P20264 500 aaPredicted RBP21.36■■□□□ 1.01
HDAC6-231ENST00000488905 UBA1P22314 1058 aaKnown RBP21.36■■□□□ 1.01
HDAC6-231ENST00000488905 CHMLP26374 656 aa21.36■■□□□ 1.01
HDAC6-231ENST00000488905 PTK7Q13308 1070 aa21.36■■□□□ 1.01
HDAC6-231ENST00000488905 CELF3Q5SZQ8 465 aaKnown RBP21.36■■□□□ 1.01
HDAC6-231ENST00000488905 MYSM1Q5VVJ2 828 aa21.36■■□□□ 1.01
HDAC6-231ENST00000488905 CNKSR3Q6P9H4 555 aa21.36■■□□□ 1.01
HDAC6-231ENST00000488905 VSIG10LQ86VR7 867 aa21.36■■□□□ 1.01
HDAC6-231ENST00000488905 IL27Q8NEV9 243 aa21.36■■□□□ 1.01
HDAC6-231ENST00000488905 SPATA33Q96N06 139 aa21.36■■□□□ 1.01
HDAC6-231ENST00000488905 SENP2Q9HC62 589 aa21.36■■□□□ 1.01
HDAC6-231ENST00000488905 MTCH2Q9Y6C9 303 aa21.36■■□□□ 1.01
HDAC6-231ENST00000488905 TAF6LQ9Y6J9 622 aa21.36■■□□□ 1.01
HDAC6-231ENST00000488905 KAT6AQ92794 2004 aa21.35■■□□□ 1.01
HDAC6-231ENST00000488905 GCOM1H8Y6P7 765 aaPredicted RBP21.35■■□□□ 1.01
HDAC6-231ENST00000488905 CYTH3O43739 400 aa21.35■■□□□ 1.01
HDAC6-231ENST00000488905 SORBS3O60504 671 aa21.35■■□□□ 1.01
HDAC6-231ENST00000488905 NBNO60934 754 aa21.35■■□□□ 1.01
HDAC6-231ENST00000488905 POLR2MP0CAP2 368 aa21.35■■□□□ 1.01
HDAC6-231ENST00000488905 CCND2P30279 289 aa21.35■■□□□ 1.01
HDAC6-231ENST00000488905 WTAPQ15007 396 aa21.35■■□□□ 1.01
HDAC6-231ENST00000488905 SART3Q15020 963 aaKnown RBP21.35■■□□□ 1.01
HDAC6-231ENST00000488905 HSDL1Q3SXM5 330 aa21.35■■□□□ 1.01
HDAC6-231ENST00000488905 ARNTL2Q8WYA1 636 aa21.35■■□□□ 1.01
HDAC6-231ENST00000488905 E7EWF7 191 aa21.34■■□□□ 1.01
HDAC6-231ENST00000488905 DEFB103AP81534 67 aa21.34■■□□□ 1.01
HDAC6-231ENST00000488905 TROAPQ12815 778 aa21.34■■□□□ 1.01
HDAC6-231ENST00000488905 TRIM71Q2Q1W2 868 aaKnown RBP21.34■■□□□ 1.01
HDAC6-231ENST00000488905 FCHSD1Q86WN1 690 aa21.34■■□□□ 1.01
HDAC6-231ENST00000488905 NCOA7Q8NI08 942 aa21.34■■□□□ 1.01
HDAC6-231ENST00000488905 WNT8BQ93098 351 aa21.34■■□□□ 1.01
HDAC6-231ENST00000488905 UHRF1Q96T88 793 aaPredicted RBP21.34■■□□□ 1.01
HDAC6-231ENST00000488905 FRMPD4Q14CM0 1322 aa21.33■■□□□ 1.01
HDAC6-231ENST00000488905 PNMA6FA0A0J9YX94 578 aa21.33■■□□□ 1.01
HDAC6-231ENST00000488905 PPFIA4O75335 1185 aa21.33■■□□□ 1.01
HDAC6-231ENST00000488905 TGFB3P10600 412 aa21.33■■□□□ 1.01
HDAC6-231ENST00000488905 SP2Q02086 613 aa21.33■■□□□ 1.01
HDAC6-231ENST00000488905 SKIV2LQ15477 1246 aaKnown RBP21.33■■□□□ 1.01
HDAC6-231ENST00000488905 TCTN1Q2MV58 587 aa21.33■■□□□ 1.01
HDAC6-231ENST00000488905 TRAF7Q6Q0C0 670 aa21.33■■□□□ 1.01
HDAC6-231ENST00000488905 TMCO2Q7Z6W1 182 aaPredicted RBP21.33■■□□□ 1.01
HDAC6-231ENST00000488905 GPKOWQ92917 476 aaPredicted RBP eCLIP21.33■■□□□ 1.01
HDAC6-231ENST00000488905 LCHNA4D1U4 455 aa21.32■■□□□ 1
HDAC6-231ENST00000488905 SGSM2O43147 1006 aa21.32■■□□□ 1
HDAC6-231ENST00000488905 ZNF200P98182 395 aaPredicted RBP21.32■■□□□ 1
HDAC6-231ENST00000488905 HIC1Q14526 733 aa21.32■■□□□ 1
HDAC6-231ENST00000488905 ZNF618Q5T7W0 954 aa21.32■■□□□ 1
HDAC6-231ENST00000488905 SPRED2Q7Z698 418 aa21.32■■□□□ 1
HDAC6-231ENST00000488905 CATIPQ7Z7H3 387 aa21.32■■□□□ 1
HDAC6-231ENST00000488905 ZFP91Q96JP5 570 aaPredicted RBP21.32■■□□□ 1
HDAC6-231ENST00000488905 C16orf70Q9BSU1 422 aa21.32■■□□□ 1
HDAC6-231ENST00000488905 ABHD14A-ACY1A0A1B0GW23 586 aa21.31■■□□□ 1
HDAC6-231ENST00000488905 EFCAB14O75071 495 aa21.31■■□□□ 1
HDAC6-231ENST00000488905 ANTXR2P58335 489 aa21.31■■□□□ 1
HDAC6-231ENST00000488905 TFF2Q03403 129 aa21.31■■□□□ 1
HDAC6-231ENST00000488905 MBTPS1Q14703 1052 aa21.31■■□□□ 1
HDAC6-231ENST00000488905 KRT40Q6A162 431 aa21.31■■□□□ 1
HDAC6-231ENST00000488905 ZBED2Q9BTP6 218 aa21.31■■□□□ 1
HDAC6-231ENST00000488905 MLXIPQ9HAP2 919 aa21.31■■□□□ 1
HDAC6-231ENST00000488905 SUPT16HQ9Y5B9 1047 aaKnown RBP21.31■■□□□ 1
HDAC6-231ENST00000488905 NLRC5Q86WI3 1866 aa21.3■■□□□ 1
HDAC6-231ENST00000488905 GJB5O95377 273 aa21.3■■□□□ 1
HDAC6-231ENST00000488905 GRB10Q13322 594 aa21.3■■□□□ 1
HDAC6-231ENST00000488905 AAK1Q2M2I8 961 aa21.3■■□□□ 1
HDAC6-231ENST00000488905 GNPTABQ3T906 1256 aa21.3■■□□□ 1
HDAC6-231ENST00000488905 SERINC5Q86VE9 423 aa21.3■■□□□ 1
HDAC6-231ENST00000488905 MB21D2Q8IYB1 491 aaPredicted RBP21.3■■□□□ 1
HDAC6-231ENST00000488905 INPP4AQ96PE3 977 aaPredicted RBP21.3■■□□□ 1
HDAC6-231ENST00000488905 EMSYQ7Z589 1322 aa21.29■■□□□ 1
HDAC6-231ENST00000488905 STAM2O75886 525 aa21.29■■□□□ 1
HDAC6-231ENST00000488905 LGALS2P05162 132 aa21.29■■□□□ 1
HDAC6-231ENST00000488905 HOXC8P31273 242 aa21.29■■□□□ 1
HDAC6-231ENST00000488905 MRPS9P82933 396 aaKnown RBP21.29■■□□□ 1
HDAC6-231ENST00000488905 IKBKEQ14164 716 aa21.29■■□□□ 1
HDAC6-231ENST00000488905 IGDCC4Q8TDY8 1250 aa21.29■■□□□ 1
HDAC6-231ENST00000488905 GDPD5Q8WTR4 605 aa21.29■■□□□ 1
HDAC6-231ENST00000488905 PIBF1Q8WXW3 757 aa21.29■■□□□ 1
HDAC6-231ENST00000488905 C17orf102A2RUQ5 167 aa21.28■■□□□ 1
HDAC6-231ENST00000488905 H3BRB1 525 aa21.28■■□□□ 1
HDAC6-231ENST00000488905 RBAK-RBAKDNI3L0D1 243 aa21.28■■□□□ 1
HDAC6-231ENST00000488905 NOP56O00567 594 aaKnown RBP21.28■■□□□ 1
HDAC6-231ENST00000488905 LPXNO60711 386 aa21.28■■□□□ 1
HDAC6-231ENST00000488905 LGR5O75473 907 aa21.28■■□□□ 1
Retrieved 100 of 20,778 RNA–protein pairs in 24.5 ms