RNA–Protein interactions for RNA: ENST00000488860.1

TRAIP-209, Transcript of TRAF interacting protein, humanhuman

TSL 3

Gene TRAIP, Length 326 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAIP-209ENST00000488860 MRVI1Q9Y6F6 885 aa13.96□□□□□ -0.17
TRAIP-209ENST00000488860 CYP3A7-CYP3A51PA0A087WV96 503 aa13.95□□□□□ -0.18
TRAIP-209ENST00000488860 RGS20O76081 388 aa13.95□□□□□ -0.18
TRAIP-209ENST00000488860 HMGCRP04035 888 aa13.95□□□□□ -0.18
TRAIP-209ENST00000488860 OR52Z1P0C646 297 aa13.95□□□□□ -0.18
TRAIP-209ENST00000488860 CYP3A7P24462 503 aa13.95□□□□□ -0.18
TRAIP-209ENST00000488860 TRIM32Q13049 653 aa13.95□□□□□ -0.18
TRAIP-209ENST00000488860 PTGDRQ13258 359 aa13.95□□□□□ -0.18
TRAIP-209ENST00000488860 SEMA3FQ13275 785 aa13.95□□□□□ -0.18
TRAIP-209ENST00000488860 ORC2Q13416 577 aaPredicted RBP13.95□□□□□ -0.18
TRAIP-209ENST00000488860 ACVR2BQ13705 512 aa13.95□□□□□ -0.18
TRAIP-209ENST00000488860 NIPA1Q7RTP0 329 aa13.95□□□□□ -0.18
TRAIP-209ENST00000488860 GJA10Q969M2 543 aa13.95□□□□□ -0.18
TRAIP-209ENST00000488860 LENG9Q96B70 501 aa13.95□□□□□ -0.18
TRAIP-209ENST00000488860 MBOAT7Q96N66 472 aa13.95□□□□□ -0.18
TRAIP-209ENST00000488860 ZNF577Q9BSK1 485 aa13.95□□□□□ -0.18
TRAIP-209ENST00000488860 TMEM60Q9H2L4 133 aa13.95□□□□□ -0.18
TRAIP-209ENST00000488860 ABHD16BQ9H3Z7 469 aa13.95□□□□□ -0.18
TRAIP-209ENST00000488860 PDGFCQ9NRA1 345 aa13.95□□□□□ -0.18
TRAIP-209ENST00000488860 CFAP45Q9UL16 551 aa13.95□□□□□ -0.18
TRAIP-209ENST00000488860 PTPN22Q9Y2R2 807 aa13.95□□□□□ -0.18
TRAIP-209ENST00000488860 DDX39AO00148 427 aaKnown RBP13.94□□□□□ -0.18
TRAIP-209ENST00000488860 MEIS1O00470 390 aa13.94□□□□□ -0.18
TRAIP-209ENST00000488860 MSH4O15457 936 aa13.94□□□□□ -0.18
TRAIP-209ENST00000488860 BAG4O95429 457 aaKnown RBP13.94□□□□□ -0.18
TRAIP-209ENST00000488860 BMP15O95972 392 aa13.94□□□□□ -0.18
TRAIP-209ENST00000488860 INHAP05111 366 aa13.94□□□□□ -0.18
TRAIP-209ENST00000488860 PRKAR2AP13861 404 aaKnown RBP13.94□□□□□ -0.18
TRAIP-209ENST00000488860 GRK4P32298 578 aa13.94□□□□□ -0.18
TRAIP-209ENST00000488860 ADCYAP1R1P41586 468 aa13.94□□□□□ -0.18
TRAIP-209ENST00000488860 SH3TC2Q8TF17 1288 aa13.94□□□□□ -0.18
TRAIP-209ENST00000488860 CDHR1Q96JP9 859 aa13.94□□□□□ -0.18
TRAIP-209ENST00000488860 KATNBL1Q9H079 304 aa13.94□□□□□ -0.18
TRAIP-209ENST00000488860 GDPD2Q9HCC8 539 aa13.94□□□□□ -0.18
TRAIP-209ENST00000488860 AGO4Q9HCK5 861 aaKnown RBP13.94□□□□□ -0.18
TRAIP-209ENST00000488860 KCNH7Q9NS40 1196 aa13.94□□□□□ -0.18
TRAIP-209ENST00000488860 POLR3EQ9NVU0 708 aa13.94□□□□□ -0.18
TRAIP-209ENST00000488860 MYH9P35579 1960 aaKnown RBP13.94□□□□□ -0.18
TRAIP-209ENST00000488860 ARIH2O95376 493 aa13.93□□□□□ -0.18
TRAIP-209ENST00000488860 YEATS4O95619 227 aa13.93□□□□□ -0.18
TRAIP-209ENST00000488860 CYBAP13498 195 aa13.93□□□□□ -0.18
TRAIP-209ENST00000488860 UBA1P22314 1058 aaKnown RBP13.93□□□□□ -0.18
TRAIP-209ENST00000488860 MARCKSP29966 332 aaPredicted RBP13.93□□□□□ -0.18
TRAIP-209ENST00000488860 CNGA1P29973 690 aa13.93□□□□□ -0.18
TRAIP-209ENST00000488860 TXKP42681 527 aa13.93□□□□□ -0.18
TRAIP-209ENST00000488860 NASPP49321 788 aaPredicted RBP13.93□□□□□ -0.18
TRAIP-209ENST00000488860 ATP2C1P98194 919 aaPredicted RBP13.93□□□□□ -0.18
TRAIP-209ENST00000488860 TTLL4Q14679 1199 aa13.93□□□□□ -0.18
TRAIP-209ENST00000488860 LY6KQ17RY6 165 aa13.93□□□□□ -0.18
TRAIP-209ENST00000488860 CCDC144BQ3MJ40 725 aa13.93□□□□□ -0.18
TRAIP-209ENST00000488860 TPRNQ4KMQ1 711 aa13.93□□□□□ -0.18
TRAIP-209ENST00000488860 LRCH2Q5VUJ6 765 aa13.93□□□□□ -0.18
TRAIP-209ENST00000488860 ATL3Q6DD88 541 aa13.93□□□□□ -0.18
TRAIP-209ENST00000488860 TAPT1Q6NXT6 567 aa13.93□□□□□ -0.18
TRAIP-209ENST00000488860 ETNPPLQ8TBG4 499 aa13.93□□□□□ -0.18
TRAIP-209ENST00000488860 PXYLP1Q8TE99 480 aa13.93□□□□□ -0.18
TRAIP-209ENST00000488860 SCFD2Q8WU76 684 aa13.93□□□□□ -0.18
TRAIP-209ENST00000488860 SPATA32Q96LK8 384 aa13.93□□□□□ -0.18
TRAIP-209ENST00000488860 SDF4Q9BRK5 362 aa13.93□□□□□ -0.18
TRAIP-209ENST00000488860 TCEAL9Q9UHQ7 104 aa13.93□□□□□ -0.18
TRAIP-209ENST00000488860 HTTP42858 3142 aa13.93□□□□□ -0.18
TRAIP-209ENST00000488860 C11orf97A0A1B0GVM6 126 aaPredicted RBP13.92□□□□□ -0.18
TRAIP-209ENST00000488860 SPATA31C2B4DYI2 1134 aa13.92□□□□□ -0.18
TRAIP-209ENST00000488860 IPO5O00410 1097 aaKnown RBP13.92□□□□□ -0.18
TRAIP-209ENST00000488860 SPTLC2O15270 562 aa13.92□□□□□ -0.18
TRAIP-209ENST00000488860 CHMP2AO43633 222 aa13.92□□□□□ -0.18
TRAIP-209ENST00000488860 GAS7O60861 476 aa13.92□□□□□ -0.18
TRAIP-209ENST00000488860 ZNF865P0CJ78 1059 aaPredicted RBP13.92□□□□□ -0.18
TRAIP-209ENST00000488860 TXNP10599 105 aaKnown RBP13.92□□□□□ -0.18
TRAIP-209ENST00000488860 ICAM3P32942 547 aa13.92□□□□□ -0.18
TRAIP-209ENST00000488860 SP4Q02446 784 aa13.92□□□□□ -0.18
TRAIP-209ENST00000488860 CACNB2Q08289 660 aaPredicted RBP13.92□□□□□ -0.18
TRAIP-209ENST00000488860 PTPAQ15257 358 aa13.92□□□□□ -0.18
TRAIP-209ENST00000488860 TMEM266Q2M3C6 531 aa13.92□□□□□ -0.18
TRAIP-209ENST00000488860 SLC9C1Q4G0N8 1177 aa13.92□□□□□ -0.18
TRAIP-209ENST00000488860 GJC2Q5T442 439 aaPredicted RBP13.92□□□□□ -0.18
TRAIP-209ENST00000488860 KCNV1Q6PIU1 500 aa13.92□□□□□ -0.18
TRAIP-209ENST00000488860 SLFN12Q8IYM2 578 aa13.92□□□□□ -0.18
TRAIP-209ENST00000488860 LINC00301Q8NCQ3 95 aa13.92□□□□□ -0.18
TRAIP-209ENST00000488860 TRPV1Q8NER1 839 aa13.92□□□□□ -0.18
TRAIP-209ENST00000488860 COPS5Q92905 334 aa13.92□□□□□ -0.18
TRAIP-209ENST00000488860 LENG1Q96BZ8 264 aaPredicted RBP13.92□□□□□ -0.18
TRAIP-209ENST00000488860 TEKT3Q9BXF9 490 aa13.92□□□□□ -0.18
TRAIP-209ENST00000488860 KCNMB3Q9NPA1 279 aa13.92□□□□□ -0.18
TRAIP-209ENST00000488860 VWA3AA6NCI4 1184 aa13.91□□□□□ -0.18
TRAIP-209ENST00000488860 LAD1O00515 517 aa13.91□□□□□ -0.18
TRAIP-209ENST00000488860 TBX3O15119 743 aa13.91□□□□□ -0.18
TRAIP-209ENST00000488860 ATP9AO75110 1047 aa13.91□□□□□ -0.18
TRAIP-209ENST00000488860 GGPS1O95749 300 aa13.91□□□□□ -0.18
TRAIP-209ENST00000488860 MYCP01106 439 aaPredicted RBP13.91□□□□□ -0.18
TRAIP-209ENST00000488860 IGHA2P01877 340 aa13.91□□□□□ -0.18
TRAIP-209ENST00000488860 AKR1A1P14550 325 aa13.91□□□□□ -0.18
TRAIP-209ENST00000488860 KCNA2P16389 499 aa13.91□□□□□ -0.18
TRAIP-209ENST00000488860 PTGS1P23219 599 aa13.91□□□□□ -0.18
TRAIP-209ENST00000488860 CCND3P30281 292 aaPredicted RBP13.91□□□□□ -0.18
TRAIP-209ENST00000488860 TNFAIP2Q03169 654 aa13.91□□□□□ -0.18
TRAIP-209ENST00000488860 ITGB3BPQ13352 177 aaPredicted RBP13.91□□□□□ -0.18
TRAIP-209ENST00000488860 SLC39A14Q15043 492 aa13.91□□□□□ -0.18
TRAIP-209ENST00000488860 TMEM63BQ5T3F8 832 aa13.91□□□□□ -0.18
TRAIP-209ENST00000488860 NCAPH2Q6IBW4 605 aa13.91□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 19.1 ms