RNA–Protein interactions for RNA: ENST00000488848.1

USP11-209, Transcript of ubiquitin specific peptidase 11, humanhuman

TSL 2

Gene USP11, Length 904 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP11-209ENST00000488848 MGAMO43451 1857 aa12.08□□□□□ -0.48
USP11-209ENST00000488848 LOXHD1Q8IVV2 1947 aa12.08□□□□□ -0.48
USP11-209ENST00000488848 VWA3AA6NCI4 1184 aa12.08□□□□□ -0.48
USP11-209ENST00000488848 SOWAHBA6NEL2 793 aa12.08□□□□□ -0.48
USP11-209ENST00000488848 SLC15A5A6NIM6 579 aa12.08□□□□□ -0.48
USP11-209ENST00000488848 CTAGE5O15320 804 aa12.08□□□□□ -0.48
USP11-209ENST00000488848 NR1I2O75469 434 aa12.08□□□□□ -0.48
USP11-209ENST00000488848 EIF3JO75822 258 aaKnown RBP12.08□□□□□ -0.48
USP11-209ENST00000488848 RGS20O76081 388 aa12.08□□□□□ -0.48
USP11-209ENST00000488848 LETM1O95202 739 aaPredicted RBP12.08□□□□□ -0.48
USP11-209ENST00000488848 NDUFA8P51970 172 aa12.08□□□□□ -0.48
USP11-209ENST00000488848 MKRN3Q13064 507 aaKnown RBP12.08□□□□□ -0.48
USP11-209ENST00000488848 TMEM266Q2M3C6 531 aa12.08□□□□□ -0.48
USP11-209ENST00000488848 ZNF792Q3KQV3 632 aa12.08□□□□□ -0.48
USP11-209ENST00000488848 PRR16Q569H4 304 aa12.08□□□□□ -0.48
USP11-209ENST00000488848 ARHGEF16Q5VV41 709 aa12.08□□□□□ -0.48
USP11-209ENST00000488848 ANKRD13CQ8N6S4 541 aa12.08□□□□□ -0.48
USP11-209ENST00000488848 RDM1Q8NG50 284 aa12.08□□□□□ -0.48
USP11-209ENST00000488848 SYMPKQ92797 1274 aaKnown RBP12.08□□□□□ -0.48
USP11-209ENST00000488848 MMP19Q99542 508 aa12.08□□□□□ -0.48
USP11-209ENST00000488848 MPHOSPH6Q99547 160 aaKnown RBP12.08□□□□□ -0.48
USP11-209ENST00000488848 SENP7Q9BQF6 1050 aa12.08□□□□□ -0.48
USP11-209ENST00000488848 MMTAG2Q9BU76 263 aaKnown RBP12.08□□□□□ -0.48
USP11-209ENST00000488848 WDR11Q9BZH6 1224 aa12.08□□□□□ -0.48
USP11-209ENST00000488848 CUEDC2Q9H467 287 aa12.08□□□□□ -0.48
USP11-209ENST00000488848 KCNH7Q9NS40 1196 aa12.08□□□□□ -0.48
USP11-209ENST00000488848 DACT1Q9NYF0 836 aa12.08□□□□□ -0.48
USP11-209ENST00000488848 TMEM63CQ9P1W3 806 aa12.08□□□□□ -0.48
USP11-209ENST00000488848 PCNTO95613 3336 aa12.07□□□□□ -0.48
USP11-209ENST00000488848 DHX15O43143 795 aaKnown RBP12.07□□□□□ -0.48
USP11-209ENST00000488848 MYL1P05976 194 aa12.07□□□□□ -0.48
USP11-209ENST00000488848 TGFB3P10600 412 aa12.07□□□□□ -0.48
USP11-209ENST00000488848 EIF2AK2P19525 551 aaKnown RBP12.07□□□□□ -0.48
USP11-209ENST00000488848 SYKP43405 635 aa12.07□□□□□ -0.48
USP11-209ENST00000488848 ZNF445P59923 1031 aa12.07□□□□□ -0.48
USP11-209ENST00000488848 SEMA3FQ13275 785 aa12.07□□□□□ -0.48
USP11-209ENST00000488848 STXBP2Q15833 593 aa12.07□□□□□ -0.48
USP11-209ENST00000488848 GNPTABQ3T906 1256 aa12.07□□□□□ -0.48
USP11-209ENST00000488848 MORN1Q5T089 497 aa12.07□□□□□ -0.48
USP11-209ENST00000488848 CYP4F22Q6NT55 531 aa12.07□□□□□ -0.48
USP11-209ENST00000488848 GPR142Q7Z601 462 aa12.07□□□□□ -0.48
USP11-209ENST00000488848 SH3RF1Q7Z6J0 888 aa12.07□□□□□ -0.48
USP11-209ENST00000488848 PLEKHH3Q7Z736 793 aa12.07□□□□□ -0.48
USP11-209ENST00000488848 PLA2G4DQ86XP0 818 aa12.07□□□□□ -0.48
USP11-209ENST00000488848 DOCK3Q8IZD9 2030 aa12.07□□□□□ -0.48
USP11-209ENST00000488848 CYP2W1Q8TAV3 490 aa12.07□□□□□ -0.48
USP11-209ENST00000488848 R3HDMLQ9H3Y0 253 aa12.07□□□□□ -0.48
USP11-209ENST00000488848 TTC12Q9H892 705 aaPredicted RBP12.07□□□□□ -0.48
USP11-209ENST00000488848 EFCC1Q9HA90 598 aa12.07□□□□□ -0.48
USP11-209ENST00000488848 AGO4Q9HCK5 861 aaKnown RBP12.07□□□□□ -0.48
USP11-209ENST00000488848 TBC1D22BQ9NU19 505 aa12.07□□□□□ -0.48
USP11-209ENST00000488848 PCDHA12Q9UN75 941 aa12.07□□□□□ -0.48
USP11-209ENST00000488848 SYNGAP1Q96PV0 1343 aa12.07□□□□□ -0.48
USP11-209ENST00000488848 KDM3AQ9Y4C1 1321 aa12.07□□□□□ -0.48
USP11-209ENST00000488848 A0A1B0GVL5 298 aa12.06□□□□□ -0.48
USP11-209ENST00000488848 RBM47A0AV96 593 aaKnown RBP12.06□□□□□ -0.48
USP11-209ENST00000488848 ASB14A6NK59 587 aa12.06□□□□□ -0.48
USP11-209ENST00000488848 SPATA31C2B4DYI2 1134 aa12.06□□□□□ -0.48
USP11-209ENST00000488848 IPO5O00410 1097 aaKnown RBP12.06□□□□□ -0.48
USP11-209ENST00000488848 ACTN4O43707 911 aaKnown RBP12.06□□□□□ -0.48
USP11-209ENST00000488848 PEX10O60683 326 aa12.06□□□□□ -0.48
USP11-209ENST00000488848 KINO60870 393 aaKnown RBP12.06□□□□□ -0.48
USP11-209ENST00000488848 ZNF202O95125 648 aa12.06□□□□□ -0.48
USP11-209ENST00000488848 SLFN14P0C7P3 912 aa12.06□□□□□ -0.48
USP11-209ENST00000488848 KCNA2P16389 499 aa12.06□□□□□ -0.48
USP11-209ENST00000488848 TXLNAP40222 546 aa12.06□□□□□ -0.48
USP11-209ENST00000488848 CNTN2Q02246 1040 aa12.06□□□□□ -0.48
USP11-209ENST00000488848 CRHR2Q13324 411 aa12.06□□□□□ -0.48
USP11-209ENST00000488848 MTMR1Q13613 665 aa12.06□□□□□ -0.48
USP11-209ENST00000488848 TMEM119Q4V9L6 283 aa12.06□□□□□ -0.48
USP11-209ENST00000488848 KANK3Q6NY19 840 aa12.06□□□□□ -0.48
USP11-209ENST00000488848 CNNM4Q6P4Q7 775 aa12.06□□□□□ -0.48
USP11-209ENST00000488848 KCNV1Q6PIU1 500 aa12.06□□□□□ -0.48
USP11-209ENST00000488848 USP49Q70CQ1 688 aa12.06□□□□□ -0.48
USP11-209ENST00000488848 OTOP1Q7RTM1 612 aa12.06□□□□□ -0.48
USP11-209ENST00000488848 NLRX1Q86UT6 975 aa12.06□□□□□ -0.48
USP11-209ENST00000488848 SPATA20Q8TB22 786 aa12.06□□□□□ -0.48
USP11-209ENST00000488848 NEK9Q8TD19 979 aa12.06□□□□□ -0.48
USP11-209ENST00000488848 SOCS4Q8WXH5 440 aa12.06□□□□□ -0.48
USP11-209ENST00000488848 ZIC5Q96T25 663 aa12.06□□□□□ -0.48
USP11-209ENST00000488848 POLR3CQ9BUI4 534 aaPredicted RBP12.06□□□□□ -0.48
USP11-209ENST00000488848 DISC1Q9NRI5 854 aa12.06□□□□□ -0.48
USP11-209ENST00000488848 SAGE1Q9NXZ1 904 aa12.06□□□□□ -0.48
USP11-209ENST00000488848 STK17AQ9UEE5 414 aa12.06□□□□□ -0.48
USP11-209ENST00000488848 MCM3APO60318 1980 aa12.05□□□□□ -0.48
USP11-209ENST00000488848 A0A087X0B3 334 aa12.05□□□□□ -0.48
USP11-209ENST00000488848 LYPLA2O95372 231 aa12.05□□□□□ -0.48
USP11-209ENST00000488848 RPA1P27694 616 aa12.05□□□□□ -0.48
USP11-209ENST00000488848 ADORA2AP29274 412 aa12.05□□□□□ -0.48
USP11-209ENST00000488848 ZNF76P36508 570 aa12.05□□□□□ -0.48
USP11-209ENST00000488848 UBA7P41226 1012 aa12.05□□□□□ -0.48
USP11-209ENST00000488848 MDM2Q00987 491 aaPredicted RBP12.05□□□□□ -0.48
USP11-209ENST00000488848 ITGB3BPQ13352 177 aaPredicted RBP12.05□□□□□ -0.48
USP11-209ENST00000488848 NAALADL2Q58DX5 795 aa12.05□□□□□ -0.48
USP11-209ENST00000488848 NT5DC1Q5TFE4 455 aa12.05□□□□□ -0.48
USP11-209ENST00000488848 HAUS3Q68CZ6 603 aa12.05□□□□□ -0.48
USP11-209ENST00000488848 CAVIN1Q6NZI2 390 aaKnown RBP12.05□□□□□ -0.48
USP11-209ENST00000488848 PDXDC2PQ6P474 469 aa12.05□□□□□ -0.48
USP11-209ENST00000488848 KRBA2Q6ZNG9 492 aa12.05□□□□□ -0.48
USP11-209ENST00000488848 IQUBQ8NA54 791 aa12.05□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 9.9 ms