RNA–Protein interactions for RNA: ENST00000488013.1

HDLBP-242, Transcript of high density lipoprotein binding protein, humanhuman

TSL 2

Gene HDLBP, Length 651 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDLBP-242ENST00000488013 CNPY2Q9Y2B0 182 aa12.49□□□□□ -0.41
HDLBP-242ENST00000488013 RLFQ13129 1914 aa12.49□□□□□ -0.41
HDLBP-242ENST00000488013 A0A1W2PQ27 194 aa12.48□□□□□ -0.41
HDLBP-242ENST00000488013 A0A1W2PQ64 194 aa12.48□□□□□ -0.41
HDLBP-242ENST00000488013 A0A1W2PQD8 194 aa12.48□□□□□ -0.41
HDLBP-242ENST00000488013 FAM86B1E9PN63 330 aa12.48□□□□□ -0.41
HDLBP-242ENST00000488013 CUTAO60888 179 aa12.48□□□□□ -0.41
HDLBP-242ENST00000488013 COBLO75128 1261 aa12.48□□□□□ -0.41
HDLBP-242ENST00000488013 TDP2O95551 362 aa12.48□□□□□ -0.41
HDLBP-242ENST00000488013 FAM86B2P0C5J1 330 aa12.48□□□□□ -0.41
HDLBP-242ENST00000488013 ITGB5P18084 799 aa12.48□□□□□ -0.41
HDLBP-242ENST00000488013 MCM4P33991 863 aa12.48□□□□□ -0.41
HDLBP-242ENST00000488013 TXLNAP40222 546 aa12.48□□□□□ -0.41
HDLBP-242ENST00000488013 UBE2HP62256 183 aa12.48□□□□□ -0.41
HDLBP-242ENST00000488013 MRPS9P82933 396 aaKnown RBP12.48□□□□□ -0.41
HDLBP-242ENST00000488013 IFNLR1Q8IU57 520 aaPredicted RBP12.48□□□□□ -0.41
HDLBP-242ENST00000488013 KCTD17Q8N5Z5 321 aa12.48□□□□□ -0.41
HDLBP-242ENST00000488013 DNAJC5GQ8N7S2 189 aa12.48□□□□□ -0.41
HDLBP-242ENST00000488013 MAML3Q96JK9 1138 aa12.48□□□□□ -0.41
HDLBP-242ENST00000488013 TINF2Q9BSI4 451 aa12.48□□□□□ -0.41
HDLBP-242ENST00000488013 ZNF577Q9BSK1 485 aa12.48□□□□□ -0.41
HDLBP-242ENST00000488013 WDR11Q9BZH6 1224 aa12.48□□□□□ -0.41
HDLBP-242ENST00000488013 ABHD16BQ9H3Z7 469 aa12.48□□□□□ -0.41
HDLBP-242ENST00000488013 KCNH7Q9NS40 1196 aa12.48□□□□□ -0.41
HDLBP-242ENST00000488013 GJD2Q9UKL4 321 aa12.48□□□□□ -0.41
HDLBP-242ENST00000488013 PCDHA12Q9UN75 941 aa12.48□□□□□ -0.41
HDLBP-242ENST00000488013 IGLV3-22A0A075B6J6 115 aa12.47□□□□□ -0.41
HDLBP-242ENST00000488013 C19orf67A6NJJ6 358 aa12.47□□□□□ -0.41
HDLBP-242ENST00000488013 SPATA31C2B4DYI2 1134 aa12.47□□□□□ -0.41
HDLBP-242ENST00000488013 IPO5O00410 1097 aaKnown RBP12.47□□□□□ -0.41
HDLBP-242ENST00000488013 MBD3O95983 291 aa12.47□□□□□ -0.41
HDLBP-242ENST00000488013 NEDD9Q14511 834 aa12.47□□□□□ -0.41
HDLBP-242ENST00000488013 MFSD14CQ5VZR4 134 aa12.47□□□□□ -0.41
HDLBP-242ENST00000488013 ARMCX2Q7L311 632 aa12.47□□□□□ -0.41
HDLBP-242ENST00000488013 C4orf32Q8N8J7 132 aa12.47□□□□□ -0.41
HDLBP-242ENST00000488013 SCFD2Q8WU76 684 aa12.47□□□□□ -0.41
HDLBP-242ENST00000488013 LENG9Q96B70 501 aa12.47□□□□□ -0.41
HDLBP-242ENST00000488013 CCDC34Q96HJ3 373 aa12.47□□□□□ -0.41
HDLBP-242ENST00000488013 TRIM47Q96LD4 638 aa12.47□□□□□ -0.41
HDLBP-242ENST00000488013 SDF4Q9BRK5 362 aa12.47□□□□□ -0.41
HDLBP-242ENST00000488013 FAM13BQ9NYF5 915 aa12.47□□□□□ -0.41
HDLBP-242ENST00000488013 MSH4O15457 936 aa12.46□□□□□ -0.41
HDLBP-242ENST00000488013 SLC37A4O43826 429 aa12.46□□□□□ -0.41
HDLBP-242ENST00000488013 EDIL3O43854 480 aa12.46□□□□□ -0.41
HDLBP-242ENST00000488013 GAS7O60861 476 aa12.46□□□□□ -0.41
HDLBP-242ENST00000488013 PRPF40AO75400 957 aaKnown RBP12.46□□□□□ -0.41
HDLBP-242ENST00000488013 CD44P16070 742 aaKnown RBP12.46□□□□□ -0.41
HDLBP-242ENST00000488013 CMA1P23946 247 aa12.46□□□□□ -0.41
HDLBP-242ENST00000488013 MARCKSP29966 332 aaPredicted RBP12.46□□□□□ -0.41
HDLBP-242ENST00000488013 UBXN2AP68543 259 aa12.46□□□□□ -0.41
HDLBP-242ENST00000488013 NBR1Q14596 966 aa12.46□□□□□ -0.41
HDLBP-242ENST00000488013 TTLL4Q14679 1199 aa12.46□□□□□ -0.41
HDLBP-242ENST00000488013 SKOR2Q2VWA4 1001 aaPredicted RBP12.46□□□□□ -0.41
HDLBP-242ENST00000488013 RDM1Q8NG50 284 aa12.46□□□□□ -0.41
HDLBP-242ENST00000488013 IL31RAQ8NI17 732 aa12.46□□□□□ -0.41
HDLBP-242ENST00000488013 ERMNQ8TAM6 284 aa12.46□□□□□ -0.41
HDLBP-242ENST00000488013 ETNPPLQ8TBG4 499 aa12.46□□□□□ -0.41
HDLBP-242ENST00000488013 SLC5A5Q92911 643 aa12.46□□□□□ -0.41
HDLBP-242ENST00000488013 FGD4Q96M96 766 aa12.46□□□□□ -0.41
HDLBP-242ENST00000488013 PURBQ96QR8 312 aaKnown RBP12.46□□□□□ -0.41
HDLBP-242ENST00000488013 TEKT3Q9BXF9 490 aa12.46□□□□□ -0.41
HDLBP-242ENST00000488013 FTOQ9C0B1 505 aaKnown RBP eCLIP12.46□□□□□ -0.41
HDLBP-242ENST00000488013 R3HDMLQ9H3Y0 253 aa12.46□□□□□ -0.41
HDLBP-242ENST00000488013 TTC12Q9H892 705 aaPredicted RBP12.46□□□□□ -0.41
HDLBP-242ENST00000488013 AGO4Q9HCK5 861 aaKnown RBP12.46□□□□□ -0.41
HDLBP-242ENST00000488013 CDKN2AIPQ9NXV6 580 aaPredicted RBP12.46□□□□□ -0.41
HDLBP-242ENST00000488013 SRRDQ9UH36 339 aa12.46□□□□□ -0.41
HDLBP-242ENST00000488013 FBXO2Q9UK22 296 aaPredicted RBP12.46□□□□□ -0.41
HDLBP-242ENST00000488013 PCDHA7Q9UN72 937 aa12.46□□□□□ -0.41
HDLBP-242ENST00000488013 NFASCO94856 1347 aa12.45□□□□□ -0.42
HDLBP-242ENST00000488013 NKRFO15226 690 aaKnown RBP eCLIP12.45□□□□□ -0.42
HDLBP-242ENST00000488013 SFNP31947 248 aa12.45□□□□□ -0.42
HDLBP-242ENST00000488013 UBA7P41226 1012 aa12.45□□□□□ -0.42
HDLBP-242ENST00000488013 TXKP42681 527 aa12.45□□□□□ -0.42
HDLBP-242ENST00000488013 FLT3LGP49771 235 aa12.45□□□□□ -0.42
HDLBP-242ENST00000488013 KRT76Q01546 638 aa12.45□□□□□ -0.42
HDLBP-242ENST00000488013 LRCH2Q5VUJ6 765 aa12.45□□□□□ -0.42
HDLBP-242ENST00000488013 HAUS3Q68CZ6 603 aa12.45□□□□□ -0.42
HDLBP-242ENST00000488013 CYP2W1Q8TAV3 490 aa12.45□□□□□ -0.42
HDLBP-242ENST00000488013 PXYLP1Q8TE99 480 aa12.45□□□□□ -0.42
HDLBP-242ENST00000488013 ZNF296Q8WUU4 475 aaPredicted RBP12.45□□□□□ -0.42
HDLBP-242ENST00000488013 TMEM60Q9H2L4 133 aa12.45□□□□□ -0.42
HDLBP-242ENST00000488013 MRVI1Q9Y6F6 885 aa12.45□□□□□ -0.42
HDLBP-242ENST00000488013 THSD7BQ9C0I4 1608 aa12.44□□□□□ -0.42
HDLBP-242ENST00000488013 ASTN1O14525 1302 aa12.44□□□□□ -0.42
HDLBP-242ENST00000488013 RBM47A0AV96 593 aaKnown RBP12.44□□□□□ -0.42
HDLBP-242ENST00000488013 VWA3AA6NCI4 1184 aa12.44□□□□□ -0.42
HDLBP-242ENST00000488013 WNT7AO00755 349 aa12.44□□□□□ -0.42
HDLBP-242ENST00000488013 CYP2B6P20813 491 aa12.44□□□□□ -0.42
HDLBP-242ENST00000488013 MUTP22033 750 aa12.44□□□□□ -0.42
HDLBP-242ENST00000488013 JAK3P52333 1124 aa12.44□□□□□ -0.42
HDLBP-242ENST00000488013 PPP2R5CQ13362 524 aa12.44□□□□□ -0.42
HDLBP-242ENST00000488013 AXDND1Q5T1B0 1012 aaPredicted RBP12.44□□□□□ -0.42
HDLBP-242ENST00000488013 KRT79Q5XKE5 535 aa12.44□□□□□ -0.42
HDLBP-242ENST00000488013 IQSEC1Q6DN90 963 aa12.44□□□□□ -0.42
HDLBP-242ENST00000488013 ZNF746Q6NUN9 644 aaPredicted RBP12.44□□□□□ -0.42
HDLBP-242ENST00000488013 CCDC73Q6ZRK6 1079 aa12.44□□□□□ -0.42
HDLBP-242ENST00000488013 SEPT14Q6ZU15 432 aa12.44□□□□□ -0.42
HDLBP-242ENST00000488013 SMAP1Q8IYB5 467 aaPredicted RBP12.44□□□□□ -0.42
HDLBP-242ENST00000488013 IGSF22Q8N9C0 903 aa12.44□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 24.9 ms