RNA–Protein interactions for RNA: ENST00000487899.1

RAB11FIP3-210, Transcript of RAB11 family interacting protein 3, humanhuman

TSL 3

Gene RAB11FIP3, Length 669 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB11FIP3-210ENST00000487899 SORBS3O60504 671 aa12.96□□□□□ -0.33
RAB11FIP3-210ENST00000487899 CDC45O75419 566 aa12.96□□□□□ -0.33
RAB11FIP3-210ENST00000487899 GGPS1O95749 300 aa12.96□□□□□ -0.33
RAB11FIP3-210ENST00000487899 PFKMP08237 780 aa12.96□□□□□ -0.33
RAB11FIP3-210ENST00000487899 SMARCA1P28370 1054 aa12.96□□□□□ -0.33
RAB11FIP3-210ENST00000487899 RBL2Q08999 1139 aa12.96□□□□□ -0.33
RAB11FIP3-210ENST00000487899 HIC1Q14526 733 aa12.96□□□□□ -0.33
RAB11FIP3-210ENST00000487899 GRIN2CQ14957 1233 aa12.96□□□□□ -0.33
RAB11FIP3-210ENST00000487899 DGKDQ16760 1214 aa12.96□□□□□ -0.33
RAB11FIP3-210ENST00000487899 CELF3Q5SZQ8 465 aaKnown RBP12.96□□□□□ -0.33
RAB11FIP3-210ENST00000487899 APOA5Q6Q788 366 aa12.96□□□□□ -0.33
RAB11FIP3-210ENST00000487899 TMTC3Q6ZXV5 915 aa12.96□□□□□ -0.33
RAB11FIP3-210ENST00000487899 MICU3Q86XE3 530 aa12.96□□□□□ -0.33
RAB11FIP3-210ENST00000487899 RASEFQ8IZ41 740 aa12.96□□□□□ -0.33
RAB11FIP3-210ENST00000487899 RRP36Q96EU6 259 aaKnown RBP12.96□□□□□ -0.33
RAB11FIP3-210ENST00000487899 COL25A1Q9BXS0 654 aaPredicted RBP12.96□□□□□ -0.33
RAB11FIP3-210ENST00000487899 BCAS3Q9H6U6 928 aa12.96□□□□□ -0.33
RAB11FIP3-210ENST00000487899 YBX2Q9Y2T7 364 aaKnown RBP12.96□□□□□ -0.33
RAB11FIP3-210ENST00000487899 KIAA1671Q9BY89 1806 aa12.96□□□□□ -0.33
RAB11FIP3-210ENST00000487899 CCDC69A6NI79 296 aa12.95□□□□□ -0.34
RAB11FIP3-210ENST00000487899 FGBP02675 491 aa12.95□□□□□ -0.34
RAB11FIP3-210ENST00000487899 IQCF3P0C7M6 154 aa12.95□□□□□ -0.34
RAB11FIP3-210ENST00000487899 FOSL2P15408 326 aa12.95□□□□□ -0.34
RAB11FIP3-210ENST00000487899 CASTP20810 708 aaKnown RBP12.95□□□□□ -0.34
RAB11FIP3-210ENST00000487899 PSEN2P49810 448 aa12.95□□□□□ -0.34
RAB11FIP3-210ENST00000487899 CHMP4BP1P59074 171 aa12.95□□□□□ -0.34
RAB11FIP3-210ENST00000487899 LAMC2Q13753 1193 aa12.95□□□□□ -0.34
RAB11FIP3-210ENST00000487899 MFSD10Q14728 455 aa12.95□□□□□ -0.34
RAB11FIP3-210ENST00000487899 PTGISQ16647 500 aa12.95□□□□□ -0.34
RAB11FIP3-210ENST00000487899 ADCK5Q3MIX3 580 aa12.95□□□□□ -0.34
RAB11FIP3-210ENST00000487899 USP17L6PQ6QN14 398 aa12.95□□□□□ -0.34
RAB11FIP3-210ENST00000487899 NFXL1Q6ZNB6 911 aa12.95□□□□□ -0.34
RAB11FIP3-210ENST00000487899 DHX37Q8IY37 1157 aaKnown RBP12.95□□□□□ -0.34
RAB11FIP3-210ENST00000487899 MAFAQ8NHW3 353 aaPredicted RBP12.95□□□□□ -0.34
RAB11FIP3-210ENST00000487899 WNT8BQ93098 351 aa12.95□□□□□ -0.34
RAB11FIP3-210ENST00000487899 TCEANC2Q96MN5 208 aa12.95□□□□□ -0.34
RAB11FIP3-210ENST00000487899 ZNF576Q9H609 170 aa12.95□□□□□ -0.34
RAB11FIP3-210ENST00000487899 HDAC6Q9UBN7 1215 aa12.95□□□□□ -0.34
RAB11FIP3-210ENST00000487899 SEC63Q9UGP8 760 aaKnown RBP12.95□□□□□ -0.34
RAB11FIP3-210ENST00000487899 hCG_1642624A0A1W2PR95 340 aa12.94□□□□□ -0.34
RAB11FIP3-210ENST00000487899 CALM1P0DP23 149 aa12.94□□□□□ -0.34
RAB11FIP3-210ENST00000487899 CALM2P0DP24 149 aa12.94□□□□□ -0.34
RAB11FIP3-210ENST00000487899 CALM3P0DP25 149 aa12.94□□□□□ -0.34
RAB11FIP3-210ENST00000487899 HOXC8P31273 242 aa12.94□□□□□ -0.34
RAB11FIP3-210ENST00000487899 ICAM3P32942 547 aa12.94□□□□□ -0.34
RAB11FIP3-210ENST00000487899 RFC2P35250 354 aa12.94□□□□□ -0.34
RAB11FIP3-210ENST00000487899 GPNMBQ14956 572 aa12.94□□□□□ -0.34
RAB11FIP3-210ENST00000487899 KIAA0753Q2KHM9 967 aa12.94□□□□□ -0.34
RAB11FIP3-210ENST00000487899 TRIM71Q2Q1W2 868 aaKnown RBP12.94□□□□□ -0.34
RAB11FIP3-210ENST00000487899 KCNV1Q6PIU1 500 aa12.94□□□□□ -0.34
RAB11FIP3-210ENST00000487899 TRAF7Q6Q0C0 670 aa12.94□□□□□ -0.34
RAB11FIP3-210ENST00000487899 DEFB128Q7Z7B8 93 aa12.94□□□□□ -0.34
RAB11FIP3-210ENST00000487899 USP38Q8NB14 1042 aa12.94□□□□□ -0.34
RAB11FIP3-210ENST00000487899 SPATA33Q96N06 139 aa12.94□□□□□ -0.34
RAB11FIP3-210ENST00000487899 LZTS2Q9BRK4 669 aa12.94□□□□□ -0.34
RAB11FIP3-210ENST00000487899 C16orf70Q9BSU1 422 aa12.94□□□□□ -0.34
RAB11FIP3-210ENST00000487899 KATNAL1Q9BW62 490 aa12.94□□□□□ -0.34
RAB11FIP3-210ENST00000487899 MTIF3Q9H2K0 278 aaKnown RBP12.94□□□□□ -0.34
RAB11FIP3-210ENST00000487899 TELO2Q9Y4R8 837 aa12.94□□□□□ -0.34
RAB11FIP3-210ENST00000487899 SLC12A7Q9Y666 1083 aa12.94□□□□□ -0.34
RAB11FIP3-210ENST00000487899 MYH9P35579 1960 aaKnown RBP12.94□□□□□ -0.34
RAB11FIP3-210ENST00000487899 NID2Q14112 1375 aa12.94□□□□□ -0.34
RAB11FIP3-210ENST00000487899 COL4A6Q14031 1691 aa12.93□□□□□ -0.34
RAB11FIP3-210ENST00000487899 STAM2O75886 525 aa12.93□□□□□ -0.34
RAB11FIP3-210ENST00000487899 LGALS2P05162 132 aa12.93□□□□□ -0.34
RAB11FIP3-210ENST00000487899 TGFB3P10600 412 aa12.93□□□□□ -0.34
RAB11FIP3-210ENST00000487899 GNAQP50148 359 aa12.93□□□□□ -0.34
RAB11FIP3-210ENST00000487899 RABGGTBP53611 331 aa12.93□□□□□ -0.34
RAB11FIP3-210ENST00000487899 EXOSC10Q01780 885 aaKnown RBP12.93□□□□□ -0.34
RAB11FIP3-210ENST00000487899 FUT2Q10981 343 aa12.93□□□□□ -0.34
RAB11FIP3-210ENST00000487899 BFSP2Q13515 415 aa12.93□□□□□ -0.34
RAB11FIP3-210ENST00000487899 RAB30Q15771 203 aa12.93□□□□□ -0.34
RAB11FIP3-210ENST00000487899 TSGA10IPQ3SY00 556 aa12.93□□□□□ -0.34
RAB11FIP3-210ENST00000487899 RNF20Q5VTR2 975 aa12.93□□□□□ -0.34
RAB11FIP3-210ENST00000487899 PCNX4Q63HM2 1172 aa12.93□□□□□ -0.34
RAB11FIP3-210ENST00000487899 TYW1BQ6NUM6 668 aa12.93□□□□□ -0.34
RAB11FIP3-210ENST00000487899 PHF6Q8IWS0 365 aaKnown RBP eCLIP12.93□□□□□ -0.34
RAB11FIP3-210ENST00000487899 RPUSD2Q8IZ73 545 aaKnown RBP12.93□□□□□ -0.34
RAB11FIP3-210ENST00000487899 TMTC2Q8N394 836 aa12.93□□□□□ -0.34
RAB11FIP3-210ENST00000487899 FANCBQ8NB91 859 aa12.93□□□□□ -0.34
RAB11FIP3-210ENST00000487899 CAGE1Q8TC20 777 aa12.93□□□□□ -0.34
RAB11FIP3-210ENST00000487899 AFAP1L1Q8TED9 768 aa12.93□□□□□ -0.34
RAB11FIP3-210ENST00000487899 NKX2-4Q9H2Z4 354 aa12.93□□□□□ -0.34
RAB11FIP3-210ENST00000487899 BRPF3Q9ULD4 1205 aa12.93□□□□□ -0.34
RAB11FIP3-210ENST00000487899 NOD1Q9Y239 953 aa12.93□□□□□ -0.34
RAB11FIP3-210ENST00000487899 SLC4A7Q9Y6M7 1214 aa12.93□□□□□ -0.34
RAB11FIP3-210ENST00000487899 ZBBXA8MT70 800 aa12.92□□□□□ -0.34
RAB11FIP3-210ENST00000487899 SPATA31C2B4DYI2 1134 aa12.92□□□□□ -0.34
RAB11FIP3-210ENST00000487899 FIBPO43427 364 aa12.92□□□□□ -0.34
RAB11FIP3-210ENST00000487899 MYOGP15173 224 aa12.92□□□□□ -0.34
RAB11FIP3-210ENST00000487899 UBE2SQ16763 222 aa12.92□□□□□ -0.34
RAB11FIP3-210ENST00000487899 TCTN1Q2MV58 587 aa12.92□□□□□ -0.34
RAB11FIP3-210ENST00000487899 GNPTABQ3T906 1256 aa12.92□□□□□ -0.34
RAB11FIP3-210ENST00000487899 WWC2Q6AWC2 1192 aa12.92□□□□□ -0.34
RAB11FIP3-210ENST00000487899 METTL7BQ6UX53 244 aa12.92□□□□□ -0.34
RAB11FIP3-210ENST00000487899 LRRC8DQ7L1W4 858 aa12.92□□□□□ -0.34
RAB11FIP3-210ENST00000487899 TRIM50Q86XT4 487 aa12.92□□□□□ -0.34
RAB11FIP3-210ENST00000487899 CCDC155Q8N6L0 562 aa12.92□□□□□ -0.34
RAB11FIP3-210ENST00000487899 SMARCC2Q8TAQ2 1214 aa12.92□□□□□ -0.34
RAB11FIP3-210ENST00000487899 NEK1Q96PY6 1258 aa12.92□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 22.6 ms