RNA–Protein interactions for RNA: ENST00000487305.5

TMEM39B-208, Transcript of transmembrane protein 39B, humanhuman

TSL 2

Gene TMEM39B, Length 2,087 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM39B-208ENST00000487305 TMC4Q7Z404 712 aa13.69□□□□□ -0.22
TMEM39B-208ENST00000487305 ZC3H3Q8IXZ2 948 aaKnown RBP13.69□□□□□ -0.22
TMEM39B-208ENST00000487305 EFCAB13Q8IY85 973 aa13.69□□□□□ -0.22
TMEM39B-208ENST00000487305 DDX12PQ92771 950 aa13.69□□□□□ -0.22
TMEM39B-208ENST00000487305 CUL5Q93034 780 aa13.69□□□□□ -0.22
TMEM39B-208ENST00000487305 CEP95Q96GE4 821 aa13.69□□□□□ -0.22
TMEM39B-208ENST00000487305 BIN2Q9UBW5 565 aaPredicted RBP13.69□□□□□ -0.22
TMEM39B-208ENST00000487305 CAPN6Q9Y6Q1 641 aa13.69□□□□□ -0.22
TMEM39B-208ENST00000487305 PITPNM2Q9BZ72 1349 aa13.69□□□□□ -0.22
TMEM39B-208ENST00000487305 ATAD5Q96QE3 1844 aa13.69□□□□□ -0.22
TMEM39B-208ENST00000487305 SRRM3A6NNA2 597 aaPredicted RBP13.68□□□□□ -0.22
TMEM39B-208ENST00000487305 AGPSO00116 658 aa13.68□□□□□ -0.22
TMEM39B-208ENST00000487305 CORO7P57737 925 aa13.68□□□□□ -0.22
TMEM39B-208ENST00000487305 C2orf54Q08AI8 447 aa13.68□□□□□ -0.22
TMEM39B-208ENST00000487305 NAB2Q15742 525 aa13.68□□□□□ -0.22
TMEM39B-208ENST00000487305 EMC10Q5UCC4 262 aa13.68□□□□□ -0.22
TMEM39B-208ENST00000487305 MOXD1Q6UVY6 613 aa13.68□□□□□ -0.22
TMEM39B-208ENST00000487305 CERKQ8TCT0 537 aa13.68□□□□□ -0.22
TMEM39B-208ENST00000487305 CD209Q9NNX6 404 aa13.68□□□□□ -0.22
TMEM39B-208ENST00000487305 MTMR4Q9NYA4 1195 aa13.68□□□□□ -0.22
TMEM39B-208ENST00000487305 AIPL1Q9NZN9 384 aa13.68□□□□□ -0.22
TMEM39B-208ENST00000487305 ATP6V0A2Q9Y487 856 aa13.68□□□□□ -0.22
TMEM39B-208ENST00000487305 DUSP10Q9Y6W6 482 aa13.68□□□□□ -0.22
TMEM39B-208ENST00000487305 ZNF185O15231 689 aa13.68□□□□□ -0.22
TMEM39B-208ENST00000487305 KCNQ2O43526 872 aa13.68□□□□□ -0.22
TMEM39B-208ENST00000487305 MOCS3O95396 460 aa13.68□□□□□ -0.22
TMEM39B-208ENST00000487305 ADRA2BP18089 450 aa13.68□□□□□ -0.22
TMEM39B-208ENST00000487305 SKOR1P84550 965 aa13.68□□□□□ -0.22
TMEM39B-208ENST00000487305 DIXDC1Q155Q3 683 aa13.68□□□□□ -0.22
TMEM39B-208ENST00000487305 CCDC40Q4G0X9 1142 aa13.68□□□□□ -0.22
TMEM39B-208ENST00000487305 FAM26FQ5R3K3 315 aa13.68□□□□□ -0.22
TMEM39B-208ENST00000487305 SND1Q7KZF4 910 aaKnown RBP eCLIP13.68□□□□□ -0.22
TMEM39B-208ENST00000487305 SLC44A5Q8NCS7 719 aa13.68□□□□□ -0.22
TMEM39B-208ENST00000487305 WHAMMQ8TF30 809 aa13.68□□□□□ -0.22
TMEM39B-208ENST00000487305 MXD3Q9BW11 206 aa13.68□□□□□ -0.22
TMEM39B-208ENST00000487305 PCDHGC5Q9Y5F6 944 aa13.68□□□□□ -0.22
TMEM39B-208ENST00000487305 NHSQ6T4R5 1651 aa13.68□□□□□ -0.22
TMEM39B-208ENST00000487305 ATXN2Q99700 1313 aaKnown RBP13.68□□□□□ -0.22
TMEM39B-208ENST00000487305 SHTN1A0MZ66 631 aa13.67□□□□□ -0.22
TMEM39B-208ENST00000487305 CLK2P49760 499 aaKnown RBP13.67□□□□□ -0.22
TMEM39B-208ENST00000487305 USP11P51784 963 aa13.67□□□□□ -0.22
TMEM39B-208ENST00000487305 RHBDL3P58872 404 aa13.67□□□□□ -0.22
TMEM39B-208ENST00000487305 SLC18A3Q16572 532 aa13.67□□□□□ -0.22
TMEM39B-208ENST00000487305 HGSNATQ68CP4 663 aa13.67□□□□□ -0.22
TMEM39B-208ENST00000487305 KRT26Q7Z3Y9 468 aa13.67□□□□□ -0.22
TMEM39B-208ENST00000487305 FMNL3Q8IVF7 1028 aa13.67□□□□□ -0.22
TMEM39B-208ENST00000487305 CD302Q8IX05 232 aa13.67□□□□□ -0.22
TMEM39B-208ENST00000487305 LRRC1Q9BTT6 524 aa13.67□□□□□ -0.22
TMEM39B-208ENST00000487305 TLR10Q9BXR5 811 aa13.67□□□□□ -0.22
TMEM39B-208ENST00000487305 TANGO6Q9C0B7 1094 aa13.67□□□□□ -0.22
TMEM39B-208ENST00000487305 PANK4Q9NVE7 773 aa13.67□□□□□ -0.22
TMEM39B-208ENST00000487305 PODXL2Q9NZ53 605 aa13.67□□□□□ -0.22
TMEM39B-208ENST00000487305 SAP30BPQ9UHR5 308 aaKnown RBP13.67□□□□□ -0.22
TMEM39B-208ENST00000487305 FOCADQ5VW36 1801 aa13.67□□□□□ -0.22
TMEM39B-208ENST00000487305 IGKV6D-41A0A0C4DH26 115 aa13.67□□□□□ -0.22
TMEM39B-208ENST00000487305 GNPATO15228 680 aa13.67□□□□□ -0.22
TMEM39B-208ENST00000487305 ZEB2O60315 1214 aa13.67□□□□□ -0.22
TMEM39B-208ENST00000487305 BBOX1O75936 387 aa13.67□□□□□ -0.22
TMEM39B-208ENST00000487305 TTLL1O95922 423 aa13.67□□□□□ -0.22
TMEM39B-208ENST00000487305 COASYQ13057 564 aa13.67□□□□□ -0.22
TMEM39B-208ENST00000487305 FAM83BQ5T0W9 1011 aa13.67□□□□□ -0.22
TMEM39B-208ENST00000487305 KLHDC7AQ5VTJ3 777 aa13.67□□□□□ -0.22
TMEM39B-208ENST00000487305 SLFN12Q8IYM2 578 aa13.67□□□□□ -0.22
TMEM39B-208ENST00000487305 DNAJC19Q96DA6 116 aa13.67□□□□□ -0.22
TMEM39B-208ENST00000487305 CAPS2Q9BXY5 557 aa13.67□□□□□ -0.22
TMEM39B-208ENST00000487305 GDF3Q9NR23 364 aa13.67□□□□□ -0.22
TMEM39B-208ENST00000487305 DDX25Q9UHL0 483 aaKnown RBP13.67□□□□□ -0.22
TMEM39B-208ENST00000487305 GGA1Q9UJY5 639 aa13.67□□□□□ -0.22
TMEM39B-208ENST00000487305 UTP18Q9Y5J1 556 aaKnown RBP eCLIP13.67□□□□□ -0.22
TMEM39B-208ENST00000487305 USP17L5A8MUK1 530 aa13.66□□□□□ -0.22
TMEM39B-208ENST00000487305 TRAF5O00463 557 aa13.66□□□□□ -0.22
TMEM39B-208ENST00000487305 EBAG9O00559 213 aa13.66□□□□□ -0.22
TMEM39B-208ENST00000487305 MARCH6O60337 910 aa13.66□□□□□ -0.22
TMEM39B-208ENST00000487305 PLEKP08567 350 aaPredicted RBP13.66□□□□□ -0.22
TMEM39B-208ENST00000487305 TNNC1P63316 161 aa13.66□□□□□ -0.22
TMEM39B-208ENST00000487305 TDRD12Q587J7 1177 aaKnown RBP13.66□□□□□ -0.22
TMEM39B-208ENST00000487305 HAUS3Q68CZ6 603 aa13.66□□□□□ -0.22
TMEM39B-208ENST00000487305 TRIM59Q8IWR1 403 aa13.66□□□□□ -0.22
TMEM39B-208ENST00000487305 CNBD1Q8NA66 436 aa13.66□□□□□ -0.22
TMEM39B-208ENST00000487305 MLXIPQ9HAP2 919 aa13.66□□□□□ -0.22
TMEM39B-208ENST00000487305 PLCB1Q9NQ66 1216 aa13.66□□□□□ -0.22
TMEM39B-208ENST00000487305 RSPH14Q9UHP6 348 aa13.66□□□□□ -0.22
TMEM39B-208ENST00000487305 FBXL5Q9UKA1 691 aa13.66□□□□□ -0.22
TMEM39B-208ENST00000487305 PCDHA12Q9UN75 941 aa13.66□□□□□ -0.22
TMEM39B-208ENST00000487305 TFR2Q9UP52 801 aa13.66□□□□□ -0.22
TMEM39B-208ENST00000487305 MYH10P35580 1976 aa13.65□□□□□ -0.22
TMEM39B-208ENST00000487305 A0A087WUV0 522 aaPredicted RBP13.65□□□□□ -0.22
TMEM39B-208ENST00000487305 TBX3O15119 743 aa13.65□□□□□ -0.22
TMEM39B-208ENST00000487305 CETN3O15182 167 aa13.65□□□□□ -0.22
TMEM39B-208ENST00000487305 CPP00450 1065 aa13.65□□□□□ -0.22
TMEM39B-208ENST00000487305 IRAK1P51617 712 aa13.65□□□□□ -0.22
TMEM39B-208ENST00000487305 GABPAQ06546 454 aa13.65□□□□□ -0.22
TMEM39B-208ENST00000487305 ZNF543Q08ER8 600 aa13.65□□□□□ -0.22
TMEM39B-208ENST00000487305 CRY2Q49AN0 593 aa13.65□□□□□ -0.22
TMEM39B-208ENST00000487305 B4GALNT4Q76KP1 1039 aa13.65□□□□□ -0.22
TMEM39B-208ENST00000487305 DYMQ7RTS9 669 aa13.65□□□□□ -0.22
TMEM39B-208ENST00000487305 RPGRQ92834 1020 aaKnown RBP13.65□□□□□ -0.22
TMEM39B-208ENST00000487305 PBKQ96KB5 322 aa13.65□□□□□ -0.22
TMEM39B-208ENST00000487305 VAT1LQ9HCJ6 419 aa13.65□□□□□ -0.22
TMEM39B-208ENST00000487305 RNF216Q9NWF9 866 aaPredicted RBP13.65□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 20.5 ms