RNA–Protein interactions for RNA: ENST00000484574.1

POLR1B-213, Transcript of RNA polymerase I subunit B, humanhuman

TSL 2

Gene POLR1B, Length 551 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
POLR1B-213ENST00000484574 ITGB8P26012 769 aa13.77□□□□□ -0.21
POLR1B-213ENST00000484574 SMAD3P84022 425 aaKnown RBP13.77□□□□□ -0.21
POLR1B-213ENST00000484574 AP3B2Q13367 1082 aa13.77□□□□□ -0.21
POLR1B-213ENST00000484574 PFKFB3Q16875 520 aaPredicted RBP13.77□□□□□ -0.21
POLR1B-213ENST00000484574 NBPF20Q3BBV1 942 aa13.77□□□□□ -0.21
POLR1B-213ENST00000484574 PSRC1Q6PGN9 363 aaPredicted RBP13.77□□□□□ -0.21
POLR1B-213ENST00000484574 METTL7BQ6UX53 244 aa13.77□□□□□ -0.21
POLR1B-213ENST00000484574 HEATR3Q7Z4Q2 680 aa13.77□□□□□ -0.21
POLR1B-213ENST00000484574 RPUSD2Q8IZ73 545 aaKnown RBP13.77□□□□□ -0.21
POLR1B-213ENST00000484574 CMTR1Q8N1G2 835 aaKnown RBP13.77□□□□□ -0.21
POLR1B-213ENST00000484574 CCDC82Q8N4S0 544 aa13.77□□□□□ -0.21
POLR1B-213ENST00000484574 IL31RAQ8NI17 732 aa13.77□□□□□ -0.21
POLR1B-213ENST00000484574 PIBF1Q8WXW3 757 aa13.77□□□□□ -0.21
POLR1B-213ENST00000484574 TCEANC2Q96MN5 208 aa13.77□□□□□ -0.21
POLR1B-213ENST00000484574 RNF26Q9BY78 433 aaPredicted RBP13.77□□□□□ -0.21
POLR1B-213ENST00000484574 HIPK3Q9H422 1215 aa13.77□□□□□ -0.21
POLR1B-213ENST00000484574 RANBP2P49792 3224 aaKnown RBP13.77□□□□□ -0.21
POLR1B-213ENST00000484574 HAS3O00219 553 aa13.76□□□□□ -0.21
POLR1B-213ENST00000484574 GGPS1O95749 300 aa13.76□□□□□ -0.21
POLR1B-213ENST00000484574 F2P00734 622 aa13.76□□□□□ -0.21
POLR1B-213ENST00000484574 IFNAR1P17181 557 aa13.76□□□□□ -0.21
POLR1B-213ENST00000484574 UBA1P22314 1058 aaKnown RBP13.76□□□□□ -0.21
POLR1B-213ENST00000484574 CDC27P30260 824 aa13.76□□□□□ -0.21
POLR1B-213ENST00000484574 RFC2P35250 354 aa13.76□□□□□ -0.21
POLR1B-213ENST00000484574 NAPAP54920 295 aa13.76□□□□□ -0.21
POLR1B-213ENST00000484574 PSMC6P62333 389 aa13.76□□□□□ -0.21
POLR1B-213ENST00000484574 APOBRQ0VD83 1088 aa13.76□□□□□ -0.21
POLR1B-213ENST00000484574 WWC2Q6AWC2 1192 aa13.76□□□□□ -0.21
POLR1B-213ENST00000484574 CCDC155Q8N6L0 562 aa13.76□□□□□ -0.21
POLR1B-213ENST00000484574 SPATA33Q96N06 139 aa13.76□□□□□ -0.21
POLR1B-213ENST00000484574 NOC4LQ9BVI4 516 aaKnown RBP13.76□□□□□ -0.21
POLR1B-213ENST00000484574 MTIF3Q9H2K0 278 aaKnown RBP13.76□□□□□ -0.21
POLR1B-213ENST00000484574 MLXIPQ9HAP2 919 aa13.76□□□□□ -0.21
POLR1B-213ENST00000484574 SH3GLB2Q9NR46 395 aa13.76□□□□□ -0.21
POLR1B-213ENST00000484574 MYH7BA7E2Y1 1941 aa13.76□□□□□ -0.21
POLR1B-213ENST00000484574 TMEM265A0A087WTH1 108 aa13.75□□□□□ -0.21
POLR1B-213ENST00000484574 STXBP3O00186 592 aa13.75□□□□□ -0.21
POLR1B-213ENST00000484574 SCG2P13521 617 aa13.75□□□□□ -0.21
POLR1B-213ENST00000484574 PTGS1P23219 599 aa13.75□□□□□ -0.21
POLR1B-213ENST00000484574 GNA11P29992 359 aa13.75□□□□□ -0.21
POLR1B-213ENST00000484574 PDIA3P30101 505 aaKnown RBP13.75□□□□□ -0.21
POLR1B-213ENST00000484574 ADD1P35611 737 aaKnown RBP13.75□□□□□ -0.21
POLR1B-213ENST00000484574 ADCY7P51828 1080 aa13.75□□□□□ -0.21
POLR1B-213ENST00000484574 AKAP17AQ02040 695 aaKnown RBP13.75□□□□□ -0.21
POLR1B-213ENST00000484574 SP2Q02086 613 aa13.75□□□□□ -0.21
POLR1B-213ENST00000484574 RBL2Q08999 1139 aa13.75□□□□□ -0.21
POLR1B-213ENST00000484574 BFSP2Q13515 415 aa13.75□□□□□ -0.21
POLR1B-213ENST00000484574 SHHQ15465 462 aa13.75□□□□□ -0.21
POLR1B-213ENST00000484574 NTRK3Q16288 839 aa13.75□□□□□ -0.21
POLR1B-213ENST00000484574 CAGE1Q8TC20 777 aa13.75□□□□□ -0.21
POLR1B-213ENST00000484574 BICD2Q8TD16 824 aa13.75□□□□□ -0.21
POLR1B-213ENST00000484574 KAT2BQ92831 832 aa13.75□□□□□ -0.21
POLR1B-213ENST00000484574 ZMYND12Q9H0C1 365 aa13.75□□□□□ -0.21
POLR1B-213ENST00000484574 TRPV6Q9H1D0 765 aa13.75□□□□□ -0.21
POLR1B-213ENST00000484574 IL23AQ9NPF7 189 aa13.75□□□□□ -0.21
POLR1B-213ENST00000484574 PCDHA6Q9UN73 950 aa13.75□□□□□ -0.21
POLR1B-213ENST00000484574 PCDHA8Q9Y5H6 950 aa13.75□□□□□ -0.21
POLR1B-213ENST00000484574 UBIAD1Q9Y5Z9 338 aa13.75□□□□□ -0.21
POLR1B-213ENST00000484574 SMCO2A6NFE2 343 aa13.74□□□□□ -0.21
POLR1B-213ENST00000484574 NOP56O00567 594 aaKnown RBP13.74□□□□□ -0.21
POLR1B-213ENST00000484574 SOX1O00570 391 aaPredicted RBP13.74□□□□□ -0.21
POLR1B-213ENST00000484574 CPA1P15085 419 aa13.74□□□□□ -0.21
POLR1B-213ENST00000484574 CLK2P49760 499 aaKnown RBP13.74□□□□□ -0.21
POLR1B-213ENST00000484574 TOB2Q14106 344 aaPredicted RBP13.74□□□□□ -0.21
POLR1B-213ENST00000484574 ANKRD1Q15327 319 aa13.74□□□□□ -0.21
POLR1B-213ENST00000484574 HSDL1Q3SXM5 330 aa13.74□□□□□ -0.21
POLR1B-213ENST00000484574 RASIP1Q5U651 963 aa13.74□□□□□ -0.21
POLR1B-213ENST00000484574 CPLX2Q6PUV4 134 aaKnown RBP13.74□□□□□ -0.21
POLR1B-213ENST00000484574 NIPA1Q7RTP0 329 aa13.74□□□□□ -0.21
POLR1B-213ENST00000484574 RAB11FIP4Q86YS3 637 aa13.74□□□□□ -0.21
POLR1B-213ENST00000484574 C7orf31Q8N865 590 aa13.74□□□□□ -0.21
POLR1B-213ENST00000484574 CCDC148Q8NFR7 591 aa13.74□□□□□ -0.21
POLR1B-213ENST00000484574 GPKOWQ92917 476 aaPredicted RBP eCLIP13.74□□□□□ -0.21
POLR1B-213ENST00000484574 C6orf50Q9HD87 102 aa13.74□□□□□ -0.21
POLR1B-213ENST00000484574 GTF2IRD1Q9UHL9 959 aa13.74□□□□□ -0.21
POLR1B-213ENST00000484574 HSFX4A0A1B0GTS1 333 aaPredicted RBP13.73□□□□□ -0.21
POLR1B-213ENST00000484574 HSFX3A0A1B0GWH4 333 aaPredicted RBP13.73□□□□□ -0.21
POLR1B-213ENST00000484574 PSEN2P49810 448 aa13.73□□□□□ -0.21
POLR1B-213ENST00000484574 MFSD10Q14728 455 aa13.73□□□□□ -0.21
POLR1B-213ENST00000484574 TRIM22Q8IYM9 498 aa13.73□□□□□ -0.21
POLR1B-213ENST00000484574 RETREG2Q8NC44 543 aa13.73□□□□□ -0.21
POLR1B-213ENST00000484574 IL27Q8NEV9 243 aa13.73□□□□□ -0.21
POLR1B-213ENST00000484574 AFAP1L1Q8TED9 768 aa13.73□□□□□ -0.21
POLR1B-213ENST00000484574 RNPC3Q96LT9 517 aaKnown RBP13.73□□□□□ -0.21
POLR1B-213ENST00000484574 C16orf70Q9BSU1 422 aa13.73□□□□□ -0.21
POLR1B-213ENST00000484574 JADE2Q9NQC1 790 aa13.73□□□□□ -0.21
POLR1B-213ENST00000484574 NAP1L2Q9ULW6 460 aaPredicted RBP13.73□□□□□ -0.21
POLR1B-213ENST00000484574 NOD1Q9Y239 953 aa13.73□□□□□ -0.21
POLR1B-213ENST00000484574 hCG_1642624A0A1W2PR95 340 aa13.72□□□□□ -0.21
POLR1B-213ENST00000484574 H3BRB1 525 aa13.72□□□□□ -0.21
POLR1B-213ENST00000484574 CYP3A4P08684 503 aa13.72□□□□□ -0.21
POLR1B-213ENST00000484574 GNAT1P11488 350 aa13.72□□□□□ -0.21
POLR1B-213ENST00000484574 CSF2RAP15509 400 aa13.72□□□□□ -0.21
POLR1B-213ENST00000484574 ITGB5P18084 799 aa13.72□□□□□ -0.21
POLR1B-213ENST00000484574 HOXC8P31273 242 aa13.72□□□□□ -0.21
POLR1B-213ENST00000484574 CYP2C18P33260 490 aa13.72□□□□□ -0.21
POLR1B-213ENST00000484574 SREBF1P36956 1147 aa13.72□□□□□ -0.21
POLR1B-213ENST00000484574 SEMA3FQ13275 785 aa13.72□□□□□ -0.21
POLR1B-213ENST00000484574 PTK7Q13308 1070 aa13.72□□□□□ -0.21
POLR1B-213ENST00000484574 MTMR1Q13613 665 aa13.72□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 14.3 ms