RNA–Protein interactions for RNA: ENST00000484378.1

HLA-C-207, Transcript of major histocompatibility complex, class I, C, humanhuman

Gene HLA-C, Length 862 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-C-207ENST00000484378 CALM1P0DP23 149 aa32.77■■■□□ 2.84
HLA-C-207ENST00000484378 CALM2P0DP24 149 aa32.77■■■□□ 2.84
HLA-C-207ENST00000484378 CALM3P0DP25 149 aa32.77■■■□□ 2.84
HLA-C-207ENST00000484378 TGFB3P10600 412 aa32.77■■■□□ 2.84
HLA-C-207ENST00000484378 ACTN1P12814 892 aa32.77■■■□□ 2.84
HLA-C-207ENST00000484378 RXRAP19793 462 aa32.77■■■□□ 2.84
HLA-C-207ENST00000484378 LIFRP42702 1097 aa32.77■■■□□ 2.84
HLA-C-207ENST00000484378 MFSD10Q14728 455 aa32.77■■■□□ 2.84
HLA-C-207ENST00000484378 CAGE1Q8TC20 777 aa32.77■■■□□ 2.84
HLA-C-207ENST00000484378 CUL5Q93034 780 aa32.77■■■□□ 2.84
HLA-C-207ENST00000484378 GTF2IRD1Q9UHL9 959 aa32.77■■■□□ 2.84
HLA-C-207ENST00000484378 KIAA0753Q2KHM9 967 aa32.76■■■□□ 2.83
HLA-C-207ENST00000484378 HSDL1Q3SXM5 330 aa32.76■■■□□ 2.83
HLA-C-207ENST00000484378 GNPTABQ3T906 1256 aa32.76■■■□□ 2.83
HLA-C-207ENST00000484378 RNF20Q5VTR2 975 aa32.76■■■□□ 2.83
HLA-C-207ENST00000484378 SRBD1Q8N5C6 995 aaKnown RBP32.76■■■□□ 2.83
HLA-C-207ENST00000484378 SMARCC2Q8TAQ2 1214 aa32.76■■■□□ 2.83
HLA-C-207ENST00000484378 GPKOWQ92917 476 aaPredicted RBP eCLIP32.76■■■□□ 2.83
HLA-C-207ENST00000484378 LRRC2Q9BYS8 371 aa32.76■■■□□ 2.83
HLA-C-207ENST00000484378 FTOQ9C0B1 505 aaKnown RBP eCLIP32.76■■■□□ 2.83
HLA-C-207ENST00000484378 NKX2-4Q9H2Z4 354 aa32.76■■■□□ 2.83
HLA-C-207ENST00000484378 HDAC6Q9UBN7 1215 aa32.76■■■□□ 2.83
HLA-C-207ENST00000484378 SLC12A7Q9Y666 1083 aa32.76■■■□□ 2.83
HLA-C-207ENST00000484378 HOXD8P13378 290 aaPredicted RBP32.75■■■□□ 2.83
HLA-C-207ENST00000484378 ATP2A2P16615 1042 aaKnown RBP32.75■■■□□ 2.83
HLA-C-207ENST00000484378 SP2Q02086 613 aa32.75■■■□□ 2.83
HLA-C-207ENST00000484378 AFAP1L1Q8TED9 768 aa32.75■■■□□ 2.83
HLA-C-207ENST00000484378 CTAGE1Q96RT6 745 aa32.75■■■□□ 2.83
HLA-C-207ENST00000484378 MLXIPQ9HAP2 919 aa32.75■■■□□ 2.83
HLA-C-207ENST00000484378 SLC28A3Q9HAS3 691 aa32.75■■■□□ 2.83
HLA-C-207ENST00000484378 YBX2Q9Y2T7 364 aaKnown RBP32.75■■■□□ 2.83
HLA-C-207ENST00000484378 PPFIA4O75335 1185 aa32.74■■■□□ 2.83
HLA-C-207ENST00000484378 STAM2O75886 525 aa32.74■■■□□ 2.83
HLA-C-207ENST00000484378 RABGGTBP53611 331 aa32.74■■■□□ 2.83
HLA-C-207ENST00000484378 RAB11FIP4Q86YS3 637 aa32.74■■■□□ 2.83
HLA-C-207ENST00000484378 CMTR1Q8N1G2 835 aaKnown RBP32.74■■■□□ 2.83
HLA-C-207ENST00000484378 GAS2L1Q99501 681 aaPredicted RBP32.74■■■□□ 2.83
HLA-C-207ENST00000484378 HAS3O00219 553 aa32.73■■■□□ 2.83
HLA-C-207ENST00000484378 MRPS9P82933 396 aaKnown RBP32.73■■■□□ 2.83
HLA-C-207ENST00000484378 USP17L6PQ6QN14 398 aa32.73■■■□□ 2.83
HLA-C-207ENST00000484378 PRDM12Q9H4Q4 367 aa32.73■■■□□ 2.83
HLA-C-207ENST00000484378 CHD7Q9P2D1 2997 aa32.72■■■□□ 2.83
HLA-C-207ENST00000484378 DHX38Q92620 1227 aaKnown RBP32.72■■■□□ 2.83
HLA-C-207ENST00000484378 INPP4AQ96PE3 977 aaPredicted RBP32.72■■■□□ 2.83
HLA-C-207ENST00000484378 TRIP12Q14669 1992 aaPredicted RBP32.71■■■□□ 2.83
HLA-C-207ENST00000484378 PIK3CDO00329 1044 aa32.71■■■□□ 2.83
HLA-C-207ENST00000484378 SELPP16109 830 aa32.71■■■□□ 2.83
HLA-C-207ENST00000484378 LRRC8DQ7L1W4 858 aa32.71■■■□□ 2.83
HLA-C-207ENST00000484378 MICU3Q86XE3 530 aa32.71■■■□□ 2.83
HLA-C-207ENST00000484378 PCDHA11Q9Y5I1 949 aa32.71■■■□□ 2.83
HLA-C-207ENST00000484378 RTEL1Q9NZ71 1219 aa32.7■■■□□ 2.83
HLA-C-207ENST00000484378 NOP56O00567 594 aaKnown RBP32.69■■■□□ 2.82
HLA-C-207ENST00000484378 MEIS2O14770 477 aa32.69■■■□□ 2.82
HLA-C-207ENST00000484378 FIBPO43427 364 aa32.69■■■□□ 2.82
HLA-C-207ENST00000484378 CDC45O75419 566 aa32.69■■■□□ 2.82
HLA-C-207ENST00000484378 ICAM3P32942 547 aa32.69■■■□□ 2.82
HLA-C-207ENST00000484378 RBL2Q08999 1139 aa32.69■■■□□ 2.82
HLA-C-207ENST00000484378 PPP2R2DQ66LE6 453 aa32.69■■■□□ 2.82
HLA-C-207ENST00000484378 SYNE3Q6ZMZ3 975 aa32.69■■■□□ 2.82
HLA-C-207ENST00000484378 TMTC3Q6ZXV5 915 aa32.69■■■□□ 2.82
HLA-C-207ENST00000484378 SGMS1Q86VZ5 419 aa32.69■■■□□ 2.82
HLA-C-207ENST00000484378 CCDC82Q8N4S0 544 aa32.69■■■□□ 2.82
HLA-C-207ENST00000484378 FANCBQ8NB91 859 aa32.69■■■□□ 2.82
HLA-C-207ENST00000484378 NEK1Q96PY6 1258 aa32.69■■■□□ 2.82
HLA-C-207ENST00000484378 SLC9A7Q96T83 725 aa32.69■■■□□ 2.82
HLA-C-207ENST00000484378 hCG_1642624A0A1W2PR95 340 aa32.68■■■□□ 2.82
HLA-C-207ENST00000484378 MYOGP15173 224 aa32.68■■■□□ 2.82
HLA-C-207ENST00000484378 PTK7Q13308 1070 aa32.68■■■□□ 2.82
HLA-C-207ENST00000484378 NEDD9Q14511 834 aa32.68■■■□□ 2.82
HLA-C-207ENST00000484378 PCNX4Q63HM2 1172 aa32.68■■■□□ 2.82
HLA-C-207ENST00000484378 C16orf70Q9BSU1 422 aa32.68■■■□□ 2.82
HLA-C-207ENST00000484378 SPATA31C2B4DYI2 1134 aa32.67■■■□□ 2.82
HLA-C-207ENST00000484378 CKBP12277 381 aa32.67■■■□□ 2.82
HLA-C-207ENST00000484378 SEMA3FQ13275 785 aa32.67■■■□□ 2.82
HLA-C-207ENST00000484378 XRRA1Q6P2D8 792 aa32.67■■■□□ 2.82
HLA-C-207ENST00000484378 METTL7BQ6UX53 244 aa32.67■■■□□ 2.82
HLA-C-207ENST00000484378 TET1Q8NFU7 2136 aa32.67■■■□□ 2.82
HLA-C-207ENST00000484378 BCAS3Q9H6U6 928 aa32.67■■■□□ 2.82
HLA-C-207ENST00000484378 PSTPIP2Q9H939 334 aa32.67■■■□□ 2.82
HLA-C-207ENST00000484378 MYO9BQ13459 2157 aa32.66■■■□□ 2.82
HLA-C-207ENST00000484378 BAIAP3O94812 1187 aa32.66■■■□□ 2.82
HLA-C-207ENST00000484378 PARNO95453 639 aaKnown RBP32.66■■■□□ 2.82
HLA-C-207ENST00000484378 CYFIP1Q7L576 1253 aa32.66■■■□□ 2.82
HLA-C-207ENST00000484378 VCANP13611 3396 aa32.66■■■□□ 2.82
HLA-C-207ENST00000484378 LGALS2P05162 132 aa32.65■■■□□ 2.82
HLA-C-207ENST00000484378 ZNF200P98182 395 aaPredicted RBP32.65■■■□□ 2.82
HLA-C-207ENST00000484378 APOA5Q6Q788 366 aa32.65■■■□□ 2.82
HLA-C-207ENST00000484378 USP38Q8NB14 1042 aa32.65■■■□□ 2.82
HLA-C-207ENST00000484378 PHOSPHO2Q8TCD6 241 aa32.65■■■□□ 2.82
HLA-C-207ENST00000484378 H3BRB1 525 aa32.64■■■□□ 2.82
HLA-C-207ENST00000484378 HEATR3Q7Z4Q2 680 aa32.64■■■□□ 2.82
HLA-C-207ENST00000484378 NLRX1Q86UT6 975 aa32.64■■■□□ 2.82
HLA-C-207ENST00000484378 TCEANC2Q96MN5 208 aa32.64■■■□□ 2.82
HLA-C-207ENST00000484378 TUT1Q9H6E5 874 aaKnown RBP32.64■■■□□ 2.82
HLA-C-207ENST00000484378 DOCK5Q9H7D0 1870 aa32.64■■■□□ 2.82
HLA-C-207ENST00000484378 KCNJ6P48051 423 aa32.63■■■□□ 2.81
HLA-C-207ENST00000484378 TRIM71Q2Q1W2 868 aaKnown RBP32.63■■■□□ 2.81
HLA-C-207ENST00000484378 DHX32Q7L7V1 743 aaKnown RBP32.63■■■□□ 2.81
HLA-C-207ENST00000484378 WNT8BQ93098 351 aa32.63■■■□□ 2.81
HLA-C-207ENST00000484378 COL25A1Q9BXS0 654 aaPredicted RBP32.63■■■□□ 2.81
Retrieved 100 of 20,778 RNA–protein pairs in 25.8 ms