RNA–Protein interactions for RNA: ENST00000484309.5

MSH5-216, Transcript of mutS homolog 5, humanhuman

TSL 5

Gene MSH5, Length 857 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH5-216ENST00000484309 KPNA6O60684 536 aa14.1□□□□□ -0.15
MSH5-216ENST00000484309 CYP2C9P11712 490 aa14.1□□□□□ -0.15
MSH5-216ENST00000484309 ADCY7P51828 1080 aa14.1□□□□□ -0.15
MSH5-216ENST00000484309 LAMC2Q13753 1193 aa14.1□□□□□ -0.15
MSH5-216ENST00000484309 DGKDQ16760 1214 aa14.1□□□□□ -0.15
MSH5-216ENST00000484309 HSDL1Q3SXM5 330 aa14.1□□□□□ -0.15
MSH5-216ENST00000484309 GNPTABQ3T906 1256 aa14.1□□□□□ -0.15
MSH5-216ENST00000484309 CELF3Q5SZQ8 465 aaKnown RBP14.1□□□□□ -0.15
MSH5-216ENST00000484309 MYSM1Q5VVJ2 828 aa14.1□□□□□ -0.15
MSH5-216ENST00000484309 PCNX4Q63HM2 1172 aa14.1□□□□□ -0.15
MSH5-216ENST00000484309 MFSD5Q6N075 450 aa14.1□□□□□ -0.15
MSH5-216ENST00000484309 KCNV1Q6PIU1 500 aa14.1□□□□□ -0.15
MSH5-216ENST00000484309 KAT2BQ92831 832 aa14.1□□□□□ -0.15
MSH5-216ENST00000484309 SPATA33Q96N06 139 aa14.1□□□□□ -0.15
MSH5-216ENST00000484309 INPP4AQ96PE3 977 aaPredicted RBP14.1□□□□□ -0.15
MSH5-216ENST00000484309 HIPK3Q9H422 1215 aa14.1□□□□□ -0.15
MSH5-216ENST00000484309 MLXIPQ9HAP2 919 aa14.1□□□□□ -0.15
MSH5-216ENST00000484309 TMEM260Q9NX78 707 aa14.1□□□□□ -0.15
MSH5-216ENST00000484309 PKD2L1Q9P0L9 805 aa14.1□□□□□ -0.15
MSH5-216ENST00000484309 PCDHA6Q9UN73 950 aa14.1□□□□□ -0.15
MSH5-216ENST00000484309 PCDHA8Q9Y5H6 950 aa14.1□□□□□ -0.15
MSH5-216ENST00000484309 TET1Q8NFU7 2136 aa14.09□□□□□ -0.15
MSH5-216ENST00000484309 SZT2Q5T011 3432 aa14.09□□□□□ -0.15
MSH5-216ENST00000484309 CCDC196A0A1B0GTZ2 297 aa14.09□□□□□ -0.15
MSH5-216ENST00000484309 SMCO2A6NFE2 343 aa14.09□□□□□ -0.15
MSH5-216ENST00000484309 ACRP10323 421 aa14.09□□□□□ -0.15
MSH5-216ENST00000484309 CSF2RAP15509 400 aa14.09□□□□□ -0.15
MSH5-216ENST00000484309 PDIA3P30101 505 aaKnown RBP14.09□□□□□ -0.15
MSH5-216ENST00000484309 CCL23P55773 120 aa14.09□□□□□ -0.15
MSH5-216ENST00000484309 SP4Q02446 784 aa14.09□□□□□ -0.15
MSH5-216ENST00000484309 STK3Q13188 491 aa14.09□□□□□ -0.15
MSH5-216ENST00000484309 LRIT3Q3SXY7 679 aa14.09□□□□□ -0.15
MSH5-216ENST00000484309 PPP1R18Q6NYC8 613 aa14.09□□□□□ -0.15
MSH5-216ENST00000484309 FBXL16Q8N461 479 aa14.09□□□□□ -0.15
MSH5-216ENST00000484309 PPTC7Q8NI37 304 aa14.09□□□□□ -0.15
MSH5-216ENST00000484309 EMID1Q96A84 441 aaPredicted RBP14.09□□□□□ -0.15
MSH5-216ENST00000484309 NOC4LQ9BVI4 516 aaKnown RBP14.09□□□□□ -0.15
MSH5-216ENST00000484309 RIC8AQ9NPQ8 531 aa14.09□□□□□ -0.15
MSH5-216ENST00000484309 BARHL2Q9NY43 387 aa14.09□□□□□ -0.15
MSH5-216ENST00000484309 TELO2Q9Y4R8 837 aa14.09□□□□□ -0.15
MSH5-216ENST00000484309 LAMA3Q16787 3333 aa14.09□□□□□ -0.15
MSH5-216ENST00000484309 WDR81Q562E7 1941 aa14.09□□□□□ -0.15
MSH5-216ENST00000484309 SPATA31C2B4DYI2 1134 aa14.08□□□□□ -0.16
MSH5-216ENST00000484309 FIBPO43427 364 aa14.08□□□□□ -0.16
MSH5-216ENST00000484309 STAM2O75886 525 aa14.08□□□□□ -0.16
MSH5-216ENST00000484309 SCG2P13521 617 aa14.08□□□□□ -0.16
MSH5-216ENST00000484309 ICAM3P32942 547 aa14.08□□□□□ -0.16
MSH5-216ENST00000484309 PSEN2P49810 448 aa14.08□□□□□ -0.16
MSH5-216ENST00000484309 PFKFB3Q16875 520 aaPredicted RBP14.08□□□□□ -0.16
MSH5-216ENST00000484309 NFRKBQ6P4R8 1299 aa14.08□□□□□ -0.16
MSH5-216ENST00000484309 Q7L0L9 218 aa14.08□□□□□ -0.16
MSH5-216ENST00000484309 CYFIP1Q7L576 1253 aa14.08□□□□□ -0.16
MSH5-216ENST00000484309 NLRX1Q86UT6 975 aa14.08□□□□□ -0.16
MSH5-216ENST00000484309 TMEM199Q8N511 208 aa14.08□□□□□ -0.16
MSH5-216ENST00000484309 SCLYQ96I15 445 aa14.08□□□□□ -0.16
MSH5-216ENST00000484309 RNPC3Q96LT9 517 aaKnown RBP14.08□□□□□ -0.16
MSH5-216ENST00000484309 BUD13Q9BRD0 619 aaKnown RBP eCLIP14.08□□□□□ -0.168e-8■■□□□ 13.8
MSH5-216ENST00000484309 SLC26A6Q9BXS9 759 aa14.08□□□□□ -0.16
MSH5-216ENST00000484309 SEZ6LQ9BYH1 1024 aa14.08□□□□□ -0.16
MSH5-216ENST00000484309 ANO3Q9BYT9 981 aa14.08□□□□□ -0.16
MSH5-216ENST00000484309 TM6SF1Q9BZW5 370 aa14.08□□□□□ -0.16
MSH5-216ENST00000484309 WNT8AQ9H1J5 351 aa14.08□□□□□ -0.16
MSH5-216ENST00000484309 PDRG1Q9NUG6 133 aa14.08□□□□□ -0.16
MSH5-216ENST00000484309 RBAK-RBAKDNI3L0D1 243 aa14.07□□□□□ -0.16
MSH5-216ENST00000484309 hCG_1984214I3L0E3 225 aa14.07□□□□□ -0.16
MSH5-216ENST00000484309 ADAMTS3O15072 1205 aa14.07□□□□□ -0.16
MSH5-216ENST00000484309 PRPF3O43395 683 aaKnown RBP14.07□□□□□ -0.16
MSH5-216ENST00000484309 SEC24BO95487 1268 aa14.07□□□□□ -0.16
MSH5-216ENST00000484309 TGFB3P10600 412 aa14.07□□□□□ -0.16
MSH5-216ENST00000484309 PPIGQ13427 754 aaKnown RBP eCLIP14.07□□□□□ -0.162e-6■■■■□ 22.9
MSH5-216ENST00000484309 MFSD10Q14728 455 aa14.07□□□□□ -0.16
MSH5-216ENST00000484309 NTRK3Q16288 839 aa14.07□□□□□ -0.16
MSH5-216ENST00000484309 PKN1Q16512 942 aa14.07□□□□□ -0.16
MSH5-216ENST00000484309 KIAA0753Q2KHM9 967 aa14.07□□□□□ -0.16
MSH5-216ENST00000484309 JAKMIP3Q5VZ66 844 aa14.07□□□□□ -0.16
MSH5-216ENST00000484309 GDF6Q6KF10 455 aaPredicted RBP14.07□□□□□ -0.16
MSH5-216ENST00000484309 C16orf59Q7L2K0 433 aa14.07□□□□□ -0.16
MSH5-216ENST00000484309 PIAS4Q8N2W9 510 aaPredicted RBP14.07□□□□□ -0.16
MSH5-216ENST00000484309 ZNF713Q8N859 430 aaPredicted RBP14.07□□□□□ -0.16
MSH5-216ENST00000484309 HDAC6Q9UBN7 1215 aa14.07□□□□□ -0.16
MSH5-216ENST00000484309 NOD1Q9Y239 953 aa14.07□□□□□ -0.16
MSH5-216ENST00000484309 PTPRSQ13332 1948 aa14.06□□□□□ -0.16
MSH5-216ENST00000484309 NOP56O00567 594 aaKnown RBP14.06□□□□□ -0.16
MSH5-216ENST00000484309 DTNBO60941 627 aa14.06□□□□□ -0.16
MSH5-216ENST00000484309 ATP9AO75110 1047 aa14.06□□□□□ -0.16
MSH5-216ENST00000484309 F2P00734 622 aa14.06□□□□□ -0.16
MSH5-216ENST00000484309 SUPT20HL2P0C7V6 817 aa14.06□□□□□ -0.16
MSH5-216ENST00000484309 ITGB5P18084 799 aa14.06□□□□□ -0.16
MSH5-216ENST00000484309 EVCP57679 992 aa14.06□□□□□ -0.16
MSH5-216ENST00000484309 AKAP17AQ02040 695 aaKnown RBP14.06□□□□□ -0.16
MSH5-216ENST00000484309 NEDD9Q14511 834 aa14.06□□□□□ -0.16
MSH5-216ENST00000484309 PTGISQ16647 500 aa14.06□□□□□ -0.16
MSH5-216ENST00000484309 XRRA1Q6P2D8 792 aa14.06□□□□□ -0.16
MSH5-216ENST00000484309 EHMT1Q9H9B1 1298 aa14.06□□□□□ -0.16
MSH5-216ENST00000484309 UBIAD1Q9Y5Z9 338 aa14.06□□□□□ -0.16
MSH5-216ENST00000484309 MYH9P35579 1960 aaKnown RBP14.05□□□□□ -0.16
MSH5-216ENST00000484309 LGALS2P05162 132 aa14.05□□□□□ -0.16
MSH5-216ENST00000484309 HOXD8P13378 290 aaPredicted RBP14.05□□□□□ -0.16
MSH5-216ENST00000484309 IFNAR1P17181 557 aa14.05□□□□□ -0.16
MSH5-216ENST00000484309 ZNF200P98182 395 aaPredicted RBP14.05□□□□□ -0.16
Retrieved 100 of 20,778 RNA–protein pairs in 16.1 ms