RNA–Protein interactions for RNA: ENST00000484252.5

LIMS2-215, Transcript of LIM zinc finger domain containing 2, humanhuman

TSL 2

Gene LIMS2, Length 2,099 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMS2-215ENST00000484252 CREG2Q8IUH2 290 aa21.8■■□□□ 1.08
LIMS2-215ENST00000484252 CCDC155Q8N6L0 562 aa21.8■■□□□ 1.08
LIMS2-215ENST00000484252 SYN2Q92777 582 aaPredicted RBP21.8■■□□□ 1.08
LIMS2-215ENST00000484252 CEP63Q96MT8 703 aa21.8■■□□□ 1.08
LIMS2-215ENST00000484252 GLT8D2Q9H1C3 349 aa21.8■■□□□ 1.08
LIMS2-215ENST00000484252 COL4A3BPQ9Y5P4 624 aa21.8■■□□□ 1.08
LIMS2-215ENST00000484252 RPS6KA5O75582 802 aa21.79■■□□□ 1.08
LIMS2-215ENST00000484252 GNA14O95837 355 aa21.79■■□□□ 1.08
LIMS2-215ENST00000484252 MAGEA1P43355 309 aa21.79■■□□□ 1.08
LIMS2-215ENST00000484252 COASYQ13057 564 aa21.79■■□□□ 1.08
LIMS2-215ENST00000484252 PICALMQ13492 652 aa21.79■■□□□ 1.08
LIMS2-215ENST00000484252 CACNA2D4Q7Z3S7 1137 aa21.79■■□□□ 1.08
LIMS2-215ENST00000484252 DNAJC19Q96DA6 116 aa21.79■■□□□ 1.08
LIMS2-215ENST00000484252 SERPINB13Q9UIV8 391 aa21.79■■□□□ 1.08
LIMS2-215ENST00000484252 HYOU1Q9Y4L1 999 aa21.79■■□□□ 1.08
LIMS2-215ENST00000484252 CAPN6Q9Y6Q1 641 aa21.79■■□□□ 1.08
LIMS2-215ENST00000484252 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP21.79■■□□□ 1.08
LIMS2-215ENST00000484252 C6orf229H3BNL8 230 aa21.79■■□□□ 1.08
LIMS2-215ENST00000484252 MARCH6O60337 910 aa21.79■■□□□ 1.08
LIMS2-215ENST00000484252 IVLP07476 585 aa21.79■■□□□ 1.08
LIMS2-215ENST00000484252 RNF10Q8N5U6 811 aaKnown RBP21.79■■□□□ 1.08
LIMS2-215ENST00000484252 HAS1Q92839 578 aa21.79■■□□□ 1.08
LIMS2-215ENST00000484252 FEZ2Q9UHY8 353 aaPredicted RBP21.79■■□□□ 1.08
LIMS2-215ENST00000484252 GTF2IP78347 998 aa21.78■■□□□ 1.08
LIMS2-215ENST00000484252 UBE2SQ16763 222 aa21.78■■□□□ 1.08
LIMS2-215ENST00000484252 ASTE1Q2TB18 679 aaPredicted RBP21.78■■□□□ 1.08
LIMS2-215ENST00000484252 FAM26FQ5R3K3 315 aa21.78■■□□□ 1.08
LIMS2-215ENST00000484252 GOLGA6L1Q8N7Z2 621 aa21.78■■□□□ 1.08
LIMS2-215ENST00000484252 MTMR8Q96EF0 704 aa21.78■■□□□ 1.08
LIMS2-215ENST00000484252 COA1Q9GZY4 146 aa21.78■■□□□ 1.08
LIMS2-215ENST00000484252 MLXIPQ9HAP2 919 aa21.78■■□□□ 1.08
LIMS2-215ENST00000484252 PANK4Q9NVE7 773 aa21.78■■□□□ 1.08
LIMS2-215ENST00000484252 CEP72Q9P209 647 aa21.78■■□□□ 1.08
LIMS2-215ENST00000484252 PCDHA12Q9UN75 941 aa21.78■■□□□ 1.08
LIMS2-215ENST00000484252 UBAP1LF5GYI3 381 aa21.78■■□□□ 1.08
LIMS2-215ENST00000484252 ZBTB5O15062 677 aa21.78■■□□□ 1.08
LIMS2-215ENST00000484252 PPP1R11O60927 126 aaPredicted RBP21.78■■□□□ 1.08
LIMS2-215ENST00000484252 MOCS3O95396 460 aa21.78■■□□□ 1.08
LIMS2-215ENST00000484252 GYS1P13807 737 aa21.78■■□□□ 1.08
LIMS2-215ENST00000484252 C2orf54Q08AI8 447 aa21.78■■□□□ 1.08
LIMS2-215ENST00000484252 CCDC65Q8IXS2 484 aa21.78■■□□□ 1.08
LIMS2-215ENST00000484252 TANGO6Q9C0B7 1094 aa21.78■■□□□ 1.08
LIMS2-215ENST00000484252 TSKSQ9UJT2 592 aa21.78■■□□□ 1.08
LIMS2-215ENST00000484252 RBAK-RBAKDNI3L0D1 243 aa21.77■■□□□ 1.08
LIMS2-215ENST00000484252 EIF6P56537 245 aaKnown RBP21.77■■□□□ 1.08
LIMS2-215ENST00000484252 RAD51AP2Q09MP3 1159 aa21.77■■□□□ 1.08
LIMS2-215ENST00000484252 LRRC41Q15345 812 aa21.77■■□□□ 1.08
LIMS2-215ENST00000484252 CCDC40Q4G0X9 1142 aa21.77■■□□□ 1.08
LIMS2-215ENST00000484252 SMCR8Q8TEV9 937 aaPredicted RBP21.77■■□□□ 1.08
LIMS2-215ENST00000484252 OSBPL9Q96SU4 736 aa21.77■■□□□ 1.08
LIMS2-215ENST00000484252 CRACR2AQ9BSW2 395 aa21.77■■□□□ 1.08
LIMS2-215ENST00000484252 PSTPIP2Q9H939 334 aa21.77■■□□□ 1.08
LIMS2-215ENST00000484252 LUC7LQ9NQ29 371 aaKnown RBP21.77■■□□□ 1.08
LIMS2-215ENST00000484252 RNF40O75150 1001 aa21.76■■□□□ 1.07
LIMS2-215ENST00000484252 SYF2O95926 243 aaKnown RBP21.76■■□□□ 1.07
LIMS2-215ENST00000484252 ECM1Q16610 540 aa21.76■■□□□ 1.07
LIMS2-215ENST00000484252 SELENOOQ9BVL4 669 aa21.76■■□□□ 1.07
LIMS2-215ENST00000484252 EFCC1Q9HA90 598 aa21.76■■□□□ 1.07
LIMS2-215ENST00000484252 FAM184BQ9ULE4 1060 aa21.76■■□□□ 1.07
LIMS2-215ENST00000484252 ATF5Q9Y2D1 282 aaPredicted RBP21.76■■□□□ 1.07
LIMS2-215ENST00000484252 LRRC37AA6NMS7 1700 aa21.76■■□□□ 1.07
LIMS2-215ENST00000484252 LTBP1Q14766 1721 aa21.76■■□□□ 1.07
LIMS2-215ENST00000484252 QSER1Q2KHR3 1735 aa21.76■■□□□ 1.07
LIMS2-215ENST00000484252 TRAF5O00463 557 aa21.76■■□□□ 1.07
LIMS2-215ENST00000484252 MARSP56192 900 aaKnown RBP21.76■■□□□ 1.07
LIMS2-215ENST00000484252 KCNMA1Q12791 1236 aa21.76■■□□□ 1.07
LIMS2-215ENST00000484252 SLC9C1Q4G0N8 1177 aa21.76■■□□□ 1.07
LIMS2-215ENST00000484252 NOX5Q96PH1 765 aa21.76■■□□□ 1.07
LIMS2-215ENST00000484252 ZC3H4Q9UPT8 1303 aaKnown RBP21.75■■□□□ 1.07
LIMS2-215ENST00000484252 SERPING1P05155 500 aa21.75■■□□□ 1.07
LIMS2-215ENST00000484252 SHMT1P34896 483 aa21.75■■□□□ 1.07
LIMS2-215ENST00000484252 SP8Q8IXZ3 490 aa21.75■■□□□ 1.07
LIMS2-215ENST00000484252 SPATA4Q8NEY3 305 aa21.75■■□□□ 1.07
LIMS2-215ENST00000484252 AENQ8WTP8 325 aaKnown RBP21.75■■□□□ 1.07
LIMS2-215ENST00000484252 FAM204AQ9H8W3 233 aa21.75■■□□□ 1.07
LIMS2-215ENST00000484252 DDX4Q9NQI0 724 aaKnown RBP21.75■■□□□ 1.07
LIMS2-215ENST00000484252 PRPF6O94906 941 aaKnown RBP21.75■■□□□ 1.07
LIMS2-215ENST00000484252 PAFAH1B1P43034 410 aa21.75■■□□□ 1.07
LIMS2-215ENST00000484252 SFMBT2Q5VUG0 894 aa21.75■■□□□ 1.07
LIMS2-215ENST00000484252 HGSNATQ68CP4 663 aa21.75■■□□□ 1.07
LIMS2-215ENST00000484252 GLIS3Q8NEA6 775 aa21.75■■□□□ 1.07
LIMS2-215ENST00000484252 AFAP1L1Q8TED9 768 aa21.75■■□□□ 1.07
LIMS2-215ENST00000484252 TRIM34Q9BYJ4 488 aa21.75■■□□□ 1.07
LIMS2-215ENST00000484252 RNF14Q9UBS8 474 aa21.75■■□□□ 1.07
LIMS2-215ENST00000484252 KLRG2A4D1S0 409 aaPredicted RBP21.74■■□□□ 1.07
LIMS2-215ENST00000484252 PHACTR2O75167 634 aa21.74■■□□□ 1.07
LIMS2-215ENST00000484252 HLA-DOAP06340 250 aa21.74■■□□□ 1.07
LIMS2-215ENST00000484252 USP11P51784 963 aa21.74■■□□□ 1.07
LIMS2-215ENST00000484252 CCDC181Q5TID7 509 aa21.74■■□□□ 1.07
LIMS2-215ENST00000484252 TTBK2Q6IQ55 1244 aa21.74■■□□□ 1.07
LIMS2-215ENST00000484252 USP40Q9NVE5 1235 aa21.74■■□□□ 1.07
LIMS2-215ENST00000484252 USP17L10C9JJH3 530 aa21.73■■□□□ 1.07
LIMS2-215ENST00000484252 ZMYND10O75800 440 aa21.73■■□□□ 1.07
LIMS2-215ENST00000484252 PPP4R3CPQ6ZMV5 832 aa21.73■■□□□ 1.07
LIMS2-215ENST00000484252 CLEC10AQ8IUN9 316 aa21.73■■□□□ 1.07
LIMS2-215ENST00000484252 CCDC17Q96LX7 622 aa21.73■■□□□ 1.07
LIMS2-215ENST00000484252 DRC1Q96MC2 740 aa21.73■■□□□ 1.07
LIMS2-215ENST00000484252 PCDHA2Q9Y5H9 948 aa21.73■■□□□ 1.07
LIMS2-215ENST00000484252 PLA2G4BP0C869 781 aa21.73■■□□□ 1.07
LIMS2-215ENST00000484252 GFPT1Q06210 699 aaPredicted RBP21.73■■□□□ 1.07
Retrieved 100 of 20,778 RNA–protein pairs in 25.8 ms