RNA–Protein interactions for RNA: ENST00000483778.5

ATG4B-221, Transcript of autophagy related 4B cysteine peptidase, humanhuman

TSL 3

Gene ATG4B, Length 1,103 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4B-221ENST00000483778 PFKMP08237 780 aa20.88■□□□□ 0.93
ATG4B-221ENST00000483778 POLR2MP0CAP2 368 aa20.88■□□□□ 0.93
ATG4B-221ENST00000483778 RFC2P35250 354 aa20.88■□□□□ 0.93
ATG4B-221ENST00000483778 MRPS9P82933 396 aaKnown RBP20.88■□□□□ 0.93
ATG4B-221ENST00000483778 BFSP2Q13515 415 aa20.88■□□□□ 0.93
ATG4B-221ENST00000483778 MFSD10Q14728 455 aa20.88■□□□□ 0.93
ATG4B-221ENST00000483778 KIAA0753Q2KHM9 967 aa20.88■□□□□ 0.93
ATG4B-221ENST00000483778 SPRED2Q7Z698 418 aa20.88■□□□□ 0.93
ATG4B-221ENST00000483778 LSG1Q9H089 658 aaKnown RBP20.88■□□□□ 0.93
ATG4B-221ENST00000483778 CERS4Q9HA82 394 aa20.88■□□□□ 0.93
ATG4B-221ENST00000483778 MAP3K20Q9NYL2 800 aaKnown RBP20.88■□□□□ 0.93
ATG4B-221ENST00000483778 GTF2IRD1Q9UHL9 959 aa20.88■□□□□ 0.93
ATG4B-221ENST00000483778 EPOPA6NHQ4 379 aa20.87■□□□□ 0.93
ATG4B-221ENST00000483778 GGPS1O95749 300 aa20.87■□□□□ 0.93
ATG4B-221ENST00000483778 HOXD8P13378 290 aaPredicted RBP20.87■□□□□ 0.93
ATG4B-221ENST00000483778 TRIM71Q2Q1W2 868 aaKnown RBP20.87■□□□□ 0.93
ATG4B-221ENST00000483778 PPP2R2DQ66LE6 453 aa20.87■□□□□ 0.93
ATG4B-221ENST00000483778 CATIPQ7Z7H3 387 aa20.87■□□□□ 0.93
ATG4B-221ENST00000483778 CMTR1Q8N1G2 835 aaKnown RBP20.87■□□□□ 0.93
ATG4B-221ENST00000483778 NBNO60934 754 aa20.86■□□□□ 0.93
ATG4B-221ENST00000483778 F2P00734 622 aa20.86■□□□□ 0.93
ATG4B-221ENST00000483778 CA3P07451 260 aa20.86■□□□□ 0.93
ATG4B-221ENST00000483778 CKBP12277 381 aa20.86■□□□□ 0.93
ATG4B-221ENST00000483778 UBA1P22314 1058 aaKnown RBP20.86■□□□□ 0.93
ATG4B-221ENST00000483778 CCND2P30279 289 aa20.86■□□□□ 0.93
ATG4B-221ENST00000483778 SEMA3FQ13275 785 aa20.86■□□□□ 0.93
ATG4B-221ENST00000483778 TRAF7Q6Q0C0 670 aa20.86■□□□□ 0.93
ATG4B-221ENST00000483778 ZNF654Q8IZM8 581 aa20.86■□□□□ 0.93
ATG4B-221ENST00000483778 SAMD3Q8N6K7 520 aa20.86■□□□□ 0.93
ATG4B-221ENST00000483778 C7orf31Q8N865 590 aa20.86■□□□□ 0.93
ATG4B-221ENST00000483778 SPATA33Q96N06 139 aa20.86■□□□□ 0.93
ATG4B-221ENST00000483778 C16orf70Q9BSU1 422 aa20.86■□□□□ 0.93
ATG4B-221ENST00000483778 RTEL1Q9NZ71 1219 aa20.86■□□□□ 0.93
ATG4B-221ENST00000483778 KAT6AQ92794 2004 aa20.86■□□□□ 0.93
ATG4B-221ENST00000483778 PRC1O43663 620 aa20.85■□□□□ 0.93
ATG4B-221ENST00000483778 PPFIA4O75335 1185 aa20.85■□□□□ 0.93
ATG4B-221ENST00000483778 PLEKHA8P1O95397 391 aa20.85■□□□□ 0.93
ATG4B-221ENST00000483778 ACTN1P12814 892 aa20.85■□□□□ 0.93
ATG4B-221ENST00000483778 SELPP16109 830 aa20.85■□□□□ 0.93
ATG4B-221ENST00000483778 RXRAP19793 462 aa20.85■□□□□ 0.93
ATG4B-221ENST00000483778 SART3Q15020 963 aaKnown RBP20.85■□□□□ 0.93
ATG4B-221ENST00000483778 USP17L6PQ6QN14 398 aa20.85■□□□□ 0.93
ATG4B-221ENST00000483778 RAB11FIP4Q86YS3 637 aa20.85■□□□□ 0.93
ATG4B-221ENST00000483778 SRBD1Q8N5C6 995 aaKnown RBP20.85■□□□□ 0.93
ATG4B-221ENST00000483778 SLC27A2O14975 620 aa20.84■□□□□ 0.93
ATG4B-221ENST00000483778 MBTPS1Q14703 1052 aa20.84■□□□□ 0.93
ATG4B-221ENST00000483778 ZNF618Q5T7W0 954 aa20.84■□□□□ 0.93
ATG4B-221ENST00000483778 KRT40Q6A162 431 aa20.84■□□□□ 0.93
ATG4B-221ENST00000483778 LRRC8DQ7L1W4 858 aa20.84■□□□□ 0.93
ATG4B-221ENST00000483778 HERC6Q8IVU3 1022 aa20.84■□□□□ 0.93
ATG4B-221ENST00000483778 CAGE1Q8TC20 777 aa20.84■□□□□ 0.93
ATG4B-221ENST00000483778 AFAP1L1Q8TED9 768 aa20.84■□□□□ 0.93
ATG4B-221ENST00000483778 ESYT1Q9BSJ8 1104 aa20.84■□□□□ 0.93
ATG4B-221ENST00000483778 LRRC2Q9BYS8 371 aa20.84■□□□□ 0.93
ATG4B-221ENST00000483778 OSBPL7Q9BZF2 842 aa20.84■□□□□ 0.93
ATG4B-221ENST00000483778 hCG_1642624A0A1W2PR95 340 aa20.83■□□□□ 0.93
ATG4B-221ENST00000483778 DEFB103AP81534 67 aa20.83■□□□□ 0.93
ATG4B-221ENST00000483778 TAP1Q03518 808 aa20.83■□□□□ 0.93
ATG4B-221ENST00000483778 RBL2Q08999 1139 aa20.83■□□□□ 0.93
ATG4B-221ENST00000483778 SPZ1Q9BXG8 430 aa20.83■□□□□ 0.93
ATG4B-221ENST00000483778 FRMPD4Q14CM0 1322 aa20.82■□□□□ 0.92
ATG4B-221ENST00000483778 LCHNA4D1U4 455 aa20.82■□□□□ 0.92
ATG4B-221ENST00000483778 SPATA31C2B4DYI2 1134 aa20.82■□□□□ 0.92
ATG4B-221ENST00000483778 SH2B2O14492 632 aaPredicted RBP20.82■□□□□ 0.92
ATG4B-221ENST00000483778 MEIS2O14770 477 aa20.82■□□□□ 0.92
ATG4B-221ENST00000483778 CXCL10P02778 98 aa20.82■□□□□ 0.92
ATG4B-221ENST00000483778 TGFB3P10600 412 aa20.82■□□□□ 0.92
ATG4B-221ENST00000483778 WDR5P61964 334 aaKnown RBP20.82■□□□□ 0.92
ATG4B-221ENST00000483778 PTK7Q13308 1070 aa20.82■□□□□ 0.92
ATG4B-221ENST00000483778 NECTIN1Q15223 517 aa20.82■□□□□ 0.92
ATG4B-221ENST00000483778 KCNV1Q6PIU1 500 aa20.82■□□□□ 0.92
ATG4B-221ENST00000483778 PHOSPHO2Q8TCD6 241 aa20.82■□□□□ 0.92
ATG4B-221ENST00000483778 SLC9A7Q96T83 725 aa20.82■□□□□ 0.92
ATG4B-221ENST00000483778 MAP3K14Q99558 947 aa20.82■□□□□ 0.92
ATG4B-221ENST00000483778 MLXIPQ9HAP2 919 aa20.82■□□□□ 0.92
ATG4B-221ENST00000483778 MICAL3Q7RTP6 2002 aa20.82■□□□□ 0.92
ATG4B-221ENST00000483778 NCOR1O75376 2440 aa20.82■□□□□ 0.92
ATG4B-221ENST00000483778 TRAF1Q13077 416 aa20.81■□□□□ 0.92
ATG4B-221ENST00000483778 CREB3L3Q68CJ9 461 aa20.81■□□□□ 0.92
ATG4B-221ENST00000483778 CYFIP1Q7L576 1253 aa20.81■□□□□ 0.92
ATG4B-221ENST00000483778 MICALL1Q8N3F8 863 aa20.81■□□□□ 0.92
ATG4B-221ENST00000483778 CCDC155Q8N6L0 562 aa20.81■□□□□ 0.92
ATG4B-221ENST00000483778 INPP4AQ96PE3 977 aaPredicted RBP20.81■□□□□ 0.92
ATG4B-221ENST00000483778 KATNAL1Q9BW62 490 aa20.81■□□□□ 0.92
ATG4B-221ENST00000483778 DDAH1O94760 285 aa20.8■□□□□ 0.92
ATG4B-221ENST00000483778 ICAM3P32942 547 aa20.8■□□□□ 0.92
ATG4B-221ENST00000483778 MCM5P33992 734 aa20.8■□□□□ 0.92
ATG4B-221ENST00000483778 TJAP1Q5JTD0 557 aa20.8■□□□□ 0.92
ATG4B-221ENST00000483778 CASC1Q6TDU7 716 aa20.8■□□□□ 0.92
ATG4B-221ENST00000483778 CCDC82Q8N4S0 544 aa20.8■□□□□ 0.92
ATG4B-221ENST00000483778 CTCFLQ8NI51 663 aaPredicted RBP20.8■□□□□ 0.92
ATG4B-221ENST00000483778 RRP36Q96EU6 259 aaKnown RBP20.8■□□□□ 0.92
ATG4B-221ENST00000483778 H3BRB1 525 aa20.79■□□□□ 0.92
ATG4B-221ENST00000483778 LGALS2P05162 132 aa20.79■□□□□ 0.92
ATG4B-221ENST00000483778 CNKSR3Q6P9H4 555 aa20.79■□□□□ 0.92
ATG4B-221ENST00000483778 NFXL1Q6ZNB6 911 aa20.79■□□□□ 0.92
ATG4B-221ENST00000483778 SERINC5Q86VE9 423 aa20.79■□□□□ 0.92
ATG4B-221ENST00000483778 TRIM50Q86XT4 487 aa20.79■□□□□ 0.92
ATG4B-221ENST00000483778 ARNTL2Q8WYA1 636 aa20.79■□□□□ 0.92
ATG4B-221ENST00000483778 GPR20Q99678 358 aa20.79■□□□□ 0.92
Retrieved 100 of 20,778 RNA–protein pairs in 13.3 ms