RNA–Protein interactions for RNA: ENST00000483656.5

HDAC6-226, Transcript of histone deacetylase 6, humanhuman

TSL 5

Gene HDAC6, Length 585 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-226ENST00000483656 VSIG10LQ86VR7 867 aa11.38□□□□□ -0.59
HDAC6-226ENST00000483656 NCAPG2Q86XI2 1143 aa11.38□□□□□ -0.59
HDAC6-226ENST00000483656 IQUBQ8NA54 791 aa11.38□□□□□ -0.59
HDAC6-226ENST00000483656 WDR11Q9BZH6 1224 aa11.38□□□□□ -0.59
HDAC6-226ENST00000483656 JADE2Q9NQC1 790 aa11.38□□□□□ -0.59
HDAC6-226ENST00000483656 FBXO40Q9UH90 709 aa11.38□□□□□ -0.59
HDAC6-226ENST00000483656 PNMA3Q9UL41 463 aa11.38□□□□□ -0.59
HDAC6-226ENST00000483656 PCDHA5Q9Y5H7 936 aa11.38□□□□□ -0.59
HDAC6-226ENST00000483656 TLL2Q9Y6L7 1015 aa11.38□□□□□ -0.59
HDAC6-226ENST00000483656 SOWAHBA6NEL2 793 aa11.37□□□□□ -0.59
HDAC6-226ENST00000483656 FAM155AB1AL88 458 aaPredicted RBP11.37□□□□□ -0.59
HDAC6-226ENST00000483656 EML1O00423 815 aa11.37□□□□□ -0.59
HDAC6-226ENST00000483656 DHX15O43143 795 aaKnown RBP11.37□□□□□ -0.59
HDAC6-226ENST00000483656 NR3C2P08235 984 aa11.37□□□□□ -0.59
HDAC6-226ENST00000483656 SLC10A3P09131 477 aa11.37□□□□□ -0.59
HDAC6-226ENST00000483656 MYCLP12524 364 aaPredicted RBP11.37□□□□□ -0.59
HDAC6-226ENST00000483656 STAT6P42226 847 aa11.37□□□□□ -0.59
HDAC6-226ENST00000483656 AFMP43652 599 aa11.37□□□□□ -0.59
HDAC6-226ENST00000483656 ERVK-9P63128 1117 aa11.37□□□□□ -0.59
HDAC6-226ENST00000483656 ERVK-24P63145 666 aa11.37□□□□□ -0.59
HDAC6-226ENST00000483656 FSTL1Q12841 308 aa11.37□□□□□ -0.59
HDAC6-226ENST00000483656 TMEM119Q4V9L6 283 aa11.37□□□□□ -0.59
HDAC6-226ENST00000483656 HYIQ5T013 277 aa11.37□□□□□ -0.59
HDAC6-226ENST00000483656 NT5DC1Q5TFE4 455 aa11.37□□□□□ -0.59
HDAC6-226ENST00000483656 KANK3Q6NY19 840 aa11.37□□□□□ -0.59
HDAC6-226ENST00000483656 XRRA1Q6P2D8 792 aa11.37□□□□□ -0.59
HDAC6-226ENST00000483656 SASS6Q6UVJ0 657 aa11.37□□□□□ -0.59
HDAC6-226ENST00000483656 OTOP1Q7RTM1 612 aa11.37□□□□□ -0.59
HDAC6-226ENST00000483656 KCNK18Q7Z418 384 aa11.37□□□□□ -0.59
HDAC6-226ENST00000483656 FAM133AQ8N9E0 248 aa11.37□□□□□ -0.59
HDAC6-226ENST00000483656 SMC1BQ8NDV3 1235 aa11.37□□□□□ -0.59
HDAC6-226ENST00000483656 SHCBP1Q8NEM2 672 aa11.37□□□□□ -0.59
HDAC6-226ENST00000483656 SPATA20Q8TB22 786 aa11.37□□□□□ -0.59
HDAC6-226ENST00000483656 NSUN6Q8TEA1 469 aaKnown RBP11.37□□□□□ -0.59
HDAC6-226ENST00000483656 SNX29Q8TEQ0 813 aa11.37□□□□□ -0.59
HDAC6-226ENST00000483656 GTF3C2Q8WUA4 911 aaPredicted RBP11.37□□□□□ -0.59
HDAC6-226ENST00000483656 STAMQ92783 540 aa11.37□□□□□ -0.59
HDAC6-226ENST00000483656 FGD4Q96M96 766 aa11.37□□□□□ -0.59
HDAC6-226ENST00000483656 PYM1Q9BRP8 204 aaKnown RBP11.37□□□□□ -0.59
HDAC6-226ENST00000483656 RAB34Q9BZG1 259 aa11.37□□□□□ -0.59
HDAC6-226ENST00000483656 PORCNQ9H237 461 aa11.37□□□□□ -0.59
HDAC6-226ENST00000483656 GRPEL1Q9HAV7 217 aa11.37□□□□□ -0.59
HDAC6-226ENST00000483656 AGO4Q9HCK5 861 aaKnown RBP11.37□□□□□ -0.59
HDAC6-226ENST00000483656 BLOC1S4Q9NUP1 217 aa11.37□□□□□ -0.59
HDAC6-226ENST00000483656 MORF4L1Q9UBU8 362 aa11.37□□□□□ -0.59
HDAC6-226ENST00000483656 CCDC39Q9UFE4 941 aa11.37□□□□□ -0.59
HDAC6-226ENST00000483656 IGF2BP3O00425 579 aaKnown RBP eCLIP11.36□□□□□ -0.59
HDAC6-226ENST00000483656 BIN1O00499 593 aa11.36□□□□□ -0.59
HDAC6-226ENST00000483656 MED24O75448 989 aa11.36□□□□□ -0.59
HDAC6-226ENST00000483656 RGS20O76081 388 aa11.36□□□□□ -0.59
HDAC6-226ENST00000483656 XRCC6P12956 609 aaKnown RBP eCLIP11.36□□□□□ -0.59
HDAC6-226ENST00000483656 BMP6P22004 513 aa11.36□□□□□ -0.59
HDAC6-226ENST00000483656 CCND2P30279 289 aa11.36□□□□□ -0.59
HDAC6-226ENST00000483656 COPB2P35606 906 aa11.36□□□□□ -0.59
HDAC6-226ENST00000483656 NLRP12P59046 1061 aa11.36□□□□□ -0.59
HDAC6-226ENST00000483656 SETQ01105 290 aaPredicted RBP11.36□□□□□ -0.59
HDAC6-226ENST00000483656 DPYDQ12882 1025 aa11.36□□□□□ -0.59
HDAC6-226ENST00000483656 SEMA3FQ13275 785 aa11.36□□□□□ -0.59
HDAC6-226ENST00000483656 ITGB3BPQ13352 177 aaPredicted RBP11.36□□□□□ -0.59
HDAC6-226ENST00000483656 ZRSR1Q15695 479 aaKnown RBP11.36□□□□□ -0.59
HDAC6-226ENST00000483656 ANO6Q4KMQ2 910 aa11.36□□□□□ -0.59
HDAC6-226ENST00000483656 KRT79Q5XKE5 535 aa11.36□□□□□ -0.59
HDAC6-226ENST00000483656 NCAPH2Q6IBW4 605 aa11.36□□□□□ -0.59
HDAC6-226ENST00000483656 C11orf57Q6ZUT1 292 aaPredicted RBP11.36□□□□□ -0.59
HDAC6-226ENST00000483656 CEP57L1Q8IYX8 460 aa11.36□□□□□ -0.59
HDAC6-226ENST00000483656 ANKRD35Q8N283 1001 aa11.36□□□□□ -0.59
HDAC6-226ENST00000483656 RNF214Q8ND24 703 aa11.36□□□□□ -0.59
HDAC6-226ENST00000483656 GPRC5AQ8NFJ5 357 aa11.36□□□□□ -0.59
HDAC6-226ENST00000483656 ZNF577Q9BSK1 485 aa11.36□□□□□ -0.59
HDAC6-226ENST00000483656 DNAJC25Q9H1X3 360 aa11.36□□□□□ -0.59
HDAC6-226ENST00000483656 EFCC1Q9HA90 598 aa11.36□□□□□ -0.59
HDAC6-226ENST00000483656 KCNH7Q9NS40 1196 aa11.36□□□□□ -0.59
HDAC6-226ENST00000483656 KBTBD4Q9NVX7 518 aa11.36□□□□□ -0.59
HDAC6-226ENST00000483656 MAN1B1Q9UKM7 699 aa11.36□□□□□ -0.59
HDAC6-226ENST00000483656 PFASO15067 1338 aa11.35□□□□□ -0.59
HDAC6-226ENST00000483656 ADGRA2Q96PE1 1338 aa11.35□□□□□ -0.59
HDAC6-226ENST00000483656 DNAJC25-GNG10A0A024R161 153 aa11.35□□□□□ -0.59
HDAC6-226ENST00000483656 MANSC4A6NHS7 340 aaPredicted RBP11.35□□□□□ -0.59
HDAC6-226ENST00000483656 POTEB2H3BUK9 544 aa11.35□□□□□ -0.59
HDAC6-226ENST00000483656 IPO5O00410 1097 aaKnown RBP11.35□□□□□ -0.59
HDAC6-226ENST00000483656 SLC26A4O43511 780 aa11.35□□□□□ -0.59
HDAC6-226ENST00000483656 GTPBP6O43824 516 aaPredicted RBP11.35□□□□□ -0.59
HDAC6-226ENST00000483656 ATP9AO75110 1047 aa11.35□□□□□ -0.59
HDAC6-226ENST00000483656 SPATA31C1P0DKV0 1188 aa11.35□□□□□ -0.59
HDAC6-226ENST00000483656 EDNRBP24530 442 aa11.35□□□□□ -0.59
HDAC6-226ENST00000483656 CCT6AP40227 531 aaKnown RBP11.35□□□□□ -0.59
HDAC6-226ENST00000483656 GCLCP48506 637 aaPredicted RBP11.35□□□□□ -0.59
HDAC6-226ENST00000483656 MRE11P49959 708 aa11.35□□□□□ -0.59
HDAC6-226ENST00000483656 ALDH5A1P51649 535 aaPredicted RBP11.35□□□□□ -0.59
HDAC6-226ENST00000483656 PPP2R5CQ13362 524 aa11.35□□□□□ -0.59
HDAC6-226ENST00000483656 CUL4BQ13620 913 aa11.35□□□□□ -0.59
HDAC6-226ENST00000483656 STX1AQ16623 288 aa11.35□□□□□ -0.59
HDAC6-226ENST00000483656 LRCH2Q5VUJ6 765 aa11.35□□□□□ -0.59
HDAC6-226ENST00000483656 ISM2Q6H9L7 571 aa11.35□□□□□ -0.59
HDAC6-226ENST00000483656 ANKRD13CQ8N6S4 541 aa11.35□□□□□ -0.59
HDAC6-226ENST00000483656 DNERQ8NFT8 737 aa11.35□□□□□ -0.59
HDAC6-226ENST00000483656 CALML4Q96GE6 196 aa11.35□□□□□ -0.59
HDAC6-226ENST00000483656 INPP4AQ96PE3 977 aaPredicted RBP11.35□□□□□ -0.59
HDAC6-226ENST00000483656 IWS1Q96ST2 819 aa11.35□□□□□ -0.59
HDAC6-226ENST00000483656 RIT2Q99578 217 aa11.35□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 15.5 ms