RNA–Protein interactions for RNA: ENST00000483448.1

SYPL1-206, Transcript of synaptophysin like 1, humanhuman

TSL 4

Gene SYPL1, Length 478 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYPL1-206ENST00000483448 PPFIA4O75335 1185 aa24.79■■□□□ 1.56
SYPL1-206ENST00000483448 STAM2O75886 525 aa24.79■■□□□ 1.56
SYPL1-206ENST00000483448 UBA1P22314 1058 aaKnown RBP24.79■■□□□ 1.56
SYPL1-206ENST00000483448 FGD1P98174 961 aa24.79■■□□□ 1.56
SYPL1-206ENST00000483448 EXOSC10Q01780 885 aaKnown RBP24.79■■□□□ 1.56
SYPL1-206ENST00000483448 MFSD10Q14728 455 aa24.79■■□□□ 1.56
SYPL1-206ENST00000483448 ADCK5Q3MIX3 580 aa24.79■■□□□ 1.56
SYPL1-206ENST00000483448 HSDL1Q3SXM5 330 aa24.79■■□□□ 1.56
SYPL1-206ENST00000483448 TSGA10IPQ3SY00 556 aa24.79■■□□□ 1.56
SYPL1-206ENST00000483448 GDF6Q6KF10 455 aaPredicted RBP24.79■■□□□ 1.56
SYPL1-206ENST00000483448 CCDC155Q8N6L0 562 aa24.79■■□□□ 1.56
SYPL1-206ENST00000483448 CXXC1Q9P0U4 656 aaPredicted RBP24.79■■□□□ 1.56
SYPL1-206ENST00000483448 HDAC6Q9UBN7 1215 aa24.79■■□□□ 1.56
SYPL1-206ENST00000483448 NAP1L2Q9ULW6 460 aaPredicted RBP24.79■■□□□ 1.56
SYPL1-206ENST00000483448 MEIS2O14770 477 aa24.78■■□□□ 1.56
SYPL1-206ENST00000483448 MRPS9P82933 396 aaKnown RBP24.78■■□□□ 1.56
SYPL1-206ENST00000483448 KIAA0753Q2KHM9 967 aa24.78■■□□□ 1.56
SYPL1-206ENST00000483448 APOA5Q6Q788 366 aa24.78■■□□□ 1.56
SYPL1-206ENST00000483448 HEATR3Q7Z4Q2 680 aa24.78■■□□□ 1.56
SYPL1-206ENST00000483448 MYLIPQ8WY64 445 aa24.78■■□□□ 1.56
SYPL1-206ENST00000483448 FTOQ9C0B1 505 aaKnown RBP eCLIP24.78■■□□□ 1.56
SYPL1-206ENST00000483448 RBM28Q9NW13 759 aaKnown RBP24.78■■□□□ 1.56
SYPL1-206ENST00000483448 MSRAQ9UJ68 235 aa24.78■■□□□ 1.56
SYPL1-206ENST00000483448 PIK3CDO00329 1044 aa24.77■■□□□ 1.56
SYPL1-206ENST00000483448 PITPNM1O00562 1244 aa24.77■■□□□ 1.56
SYPL1-206ENST00000483448 ZBTB43O43298 467 aa24.77■■□□□ 1.56
SYPL1-206ENST00000483448 PFKMP08237 780 aa24.77■■□□□ 1.56
SYPL1-206ENST00000483448 IQCF3P0C7M6 154 aa24.77■■□□□ 1.56
SYPL1-206ENST00000483448 PBX2P40425 430 aa24.77■■□□□ 1.56
SYPL1-206ENST00000483448 SESTD1Q86VW0 696 aa24.77■■□□□ 1.56
SYPL1-206ENST00000483448 PBX4Q9BYU1 374 aa24.77■■□□□ 1.56
SYPL1-206ENST00000483448 SLC4A7Q9Y6M7 1214 aa24.77■■□□□ 1.56
SYPL1-206ENST00000483448 NOP56O00567 594 aaKnown RBP24.76■■□□□ 1.55
SYPL1-206ENST00000483448 HMGB1P09429 215 aaKnown RBP24.76■■□□□ 1.55
SYPL1-206ENST00000483448 ACTN1P12814 892 aa24.76■■□□□ 1.55
SYPL1-206ENST00000483448 RFC2P35250 354 aa24.76■■□□□ 1.55
SYPL1-206ENST00000483448 NEDD9Q14511 834 aa24.76■■□□□ 1.55
SYPL1-206ENST00000483448 RTN1Q16799 776 aa24.76■■□□□ 1.55
SYPL1-206ENST00000483448 XRRA1Q6P2D8 792 aa24.76■■□□□ 1.55
SYPL1-206ENST00000483448 INPP4AQ96PE3 977 aaPredicted RBP24.76■■□□□ 1.55
SYPL1-206ENST00000483448 ZNF576Q9H609 170 aa24.76■■□□□ 1.55
SYPL1-206ENST00000483448 GTF2IRD1Q9UHL9 959 aa24.76■■□□□ 1.55
SYPL1-206ENST00000483448 BRPF3Q9ULD4 1205 aa24.76■■□□□ 1.55
SYPL1-206ENST00000483448 FRMPD4Q14CM0 1322 aa24.76■■□□□ 1.55
SYPL1-206ENST00000483448 MYH7BA7E2Y1 1941 aa24.75■■□□□ 1.55
SYPL1-206ENST00000483448 KLF18A0A0U1RQI7 1052 aa24.75■■□□□ 1.55
SYPL1-206ENST00000483448 SPATA31C2B4DYI2 1134 aa24.75■■□□□ 1.55
SYPL1-206ENST00000483448 FIBPO43427 364 aa24.75■■□□□ 1.55
SYPL1-206ENST00000483448 F2P00734 622 aa24.75■■□□□ 1.55
SYPL1-206ENST00000483448 ICAM3P32942 547 aa24.75■■□□□ 1.55
SYPL1-206ENST00000483448 PCNX4Q63HM2 1172 aa24.75■■□□□ 1.55
SYPL1-206ENST00000483448 CYFIP1Q7L576 1253 aa24.75■■□□□ 1.55
SYPL1-206ENST00000483448 NLRX1Q86UT6 975 aa24.75■■□□□ 1.55
SYPL1-206ENST00000483448 BCAS3Q9H6U6 928 aa24.75■■□□□ 1.55
SYPL1-206ENST00000483448 GOLGA8AA7E2F4 631 aa24.74■■□□□ 1.55
SYPL1-206ENST00000483448 GOLGA8BA8MQT2 603 aa24.74■■□□□ 1.55
SYPL1-206ENST00000483448 FOSL2P15408 326 aa24.74■■□□□ 1.55
SYPL1-206ENST00000483448 GRIN2CQ14957 1233 aa24.74■■□□□ 1.55
SYPL1-206ENST00000483448 RAB30Q15771 203 aa24.74■■□□□ 1.55
SYPL1-206ENST00000483448 UBE2SQ16763 222 aa24.74■■□□□ 1.55
SYPL1-206ENST00000483448 CAGE1Q8TC20 777 aa24.74■■□□□ 1.55
SYPL1-206ENST00000483448 SPDYE3A6NKU9 549 aa24.73■■□□□ 1.55
SYPL1-206ENST00000483448 HAS3O00219 553 aa24.73■■□□□ 1.55
SYPL1-206ENST00000483448 CPA1P15085 419 aa24.73■■□□□ 1.55
SYPL1-206ENST00000483448 VWCEQ96DN2 955 aa24.73■■□□□ 1.55
SYPL1-206ENST00000483448 JAKMIP1Q96N16 626 aaKnown RBP24.73■■□□□ 1.55
SYPL1-206ENST00000483448 V9GY48 417 aaPredicted RBP24.73■■□□□ 1.55
SYPL1-206ENST00000483448 HOXD8P13378 290 aaPredicted RBP24.72■■□□□ 1.55
SYPL1-206ENST00000483448 ZNF200P98182 395 aaPredicted RBP24.72■■□□□ 1.55
SYPL1-206ENST00000483448 SP4Q02446 784 aa24.72■■□□□ 1.55
SYPL1-206ENST00000483448 SEMA3FQ13275 785 aa24.72■■□□□ 1.55
SYPL1-206ENST00000483448 AFAP1L1Q8TED9 768 aa24.72■■□□□ 1.55
SYPL1-206ENST00000483448 H3BRB1 525 aa24.71■■□□□ 1.55
SYPL1-206ENST00000483448 REC8O95072 547 aa24.71■■□□□ 1.55
SYPL1-206ENST00000483448 SELPP16109 830 aa24.71■■□□□ 1.55
SYPL1-206ENST00000483448 ATP2A2P16615 1042 aaKnown RBP24.71■■□□□ 1.55
SYPL1-206ENST00000483448 RABGGTBP53611 331 aa24.71■■□□□ 1.55
SYPL1-206ENST00000483448 NAPAP54920 295 aa24.71■■□□□ 1.55
SYPL1-206ENST00000483448 METTL7BQ6UX53 244 aa24.71■■□□□ 1.55
SYPL1-206ENST00000483448 MAFAQ8NHW3 353 aaPredicted RBP24.71■■□□□ 1.55
SYPL1-206ENST00000483448 CTAGE1Q96RT6 745 aa24.71■■□□□ 1.55
SYPL1-206ENST00000483448 C16orf70Q9BSU1 422 aa24.71■■□□□ 1.55
SYPL1-206ENST00000483448 NKX2-4Q9H2Z4 354 aa24.71■■□□□ 1.55
SYPL1-206ENST00000483448 TUT1Q9H6E5 874 aaKnown RBP24.71■■□□□ 1.55
SYPL1-206ENST00000483448 EHMT1Q9H9B1 1298 aa24.71■■□□□ 1.55
SYPL1-206ENST00000483448 PCDHA6Q9UN73 950 aa24.71■■□□□ 1.55
SYPL1-206ENST00000483448 PCDHA8Q9Y5H6 950 aa24.71■■□□□ 1.55
SYPL1-206ENST00000483448 CNTNAP5Q8WYK1 1306 aa24.7■■□□□ 1.54
SYPL1-206ENST00000483448 COL6A3P12111 3177 aa24.7■■□□□ 1.54
SYPL1-206ENST00000483448 LGALS2P05162 132 aa24.7■■□□□ 1.54
SYPL1-206ENST00000483448 HSPA4P34932 840 aa24.7■■□□□ 1.54
SYPL1-206ENST00000483448 PTK7Q13308 1070 aa24.7■■□□□ 1.54
SYPL1-206ENST00000483448 UTP14CQ5TAP6 766 aaKnown RBP24.7■■□□□ 1.54
SYPL1-206ENST00000483448 WWC2Q6AWC2 1192 aa24.7■■□□□ 1.54
SYPL1-206ENST00000483448 BLOC1S2Q6QNY1 142 aa24.7■■□□□ 1.54
SYPL1-206ENST00000483448 Q6ZUG5 572 aa24.7■■□□□ 1.54
SYPL1-206ENST00000483448 LRRC8DQ7L1W4 858 aa24.7■■□□□ 1.54
SYPL1-206ENST00000483448 DHX38Q92620 1227 aaKnown RBP24.7■■□□□ 1.54
SYPL1-206ENST00000483448 USP26Q9BXU7 913 aa24.7■■□□□ 1.54
SYPL1-206ENST00000483448 SLC28A3Q9HAS3 691 aa24.7■■□□□ 1.54
Retrieved 100 of 20,778 RNA–protein pairs in 24.5 ms