RNA–Protein interactions for RNA: ENST00000482714.5

CCM2-215, Transcript of CCM2 scaffold protein, humanhuman

TSL 2

Gene CCM2, Length 1,459 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCM2-215ENST00000482714 DUSP28Q4G0W2 176 aa17.4■□□□□ 0.38
CCM2-215ENST00000482714 TTC38Q5R3I4 469 aa17.4■□□□□ 0.38
CCM2-215ENST00000482714 PRAMEF19Q5SWL8 479 aa17.4■□□□□ 0.38
CCM2-215ENST00000482714 FBXO16Q8IX29 292 aaPredicted RBP17.4■□□□□ 0.38
CCM2-215ENST00000482714 TBC1D22BQ9NU19 505 aa17.4■□□□□ 0.38
CCM2-215ENST00000482714 CHMP5Q9NZZ3 219 aa17.4■□□□□ 0.38
CCM2-215ENST00000482714 DDX25Q9UHL0 483 aaKnown RBP17.4■□□□□ 0.38
CCM2-215ENST00000482714 ZHX1Q9UKY1 873 aaPredicted RBP17.4■□□□□ 0.38
CCM2-215ENST00000482714 MRVI1Q9Y6F6 885 aa17.4■□□□□ 0.38
CCM2-215ENST00000482714 CAPN15O75808 1086 aa17.39■□□□□ 0.37
CCM2-215ENST00000482714 BAG4O95429 457 aaKnown RBP17.39■□□□□ 0.37
CCM2-215ENST00000482714 TXNP10599 105 aaKnown RBP17.39■□□□□ 0.37
CCM2-215ENST00000482714 TNFAIP2Q03169 654 aa17.39■□□□□ 0.37
CCM2-215ENST00000482714 PRR16Q569H4 304 aa17.39■□□□□ 0.37
CCM2-215ENST00000482714 FERMT3Q86UX7 667 aa17.39■□□□□ 0.37
CCM2-215ENST00000482714 SLFN12Q8IYM2 578 aa17.39■□□□□ 0.37
CCM2-215ENST00000482714 CYP2W1Q8TAV3 490 aa17.39■□□□□ 0.37
CCM2-215ENST00000482714 ABHD8Q96I13 439 aa17.39■□□□□ 0.37
CCM2-215ENST00000482714 ZNF396Q96N95 335 aaPredicted RBP17.39■□□□□ 0.37
CCM2-215ENST00000482714 MCOLN1Q9GZU1 580 aa17.39■□□□□ 0.37
CCM2-215ENST00000482714 CEP131Q9UPN4 1083 aa17.39■□□□□ 0.37
CCM2-215ENST00000482714 ZDHHC9Q9Y397 364 aa17.39■□□□□ 0.37
CCM2-215ENST00000482714 NFASCO94856 1347 aa17.38■□□□□ 0.37
CCM2-215ENST00000482714 FAM205CA6NFA0 338 aa17.38■□□□□ 0.37
CCM2-215ENST00000482714 DUSP11O75319 330 aaKnown RBP17.38■□□□□ 0.37
CCM2-215ENST00000482714 NKX3-2P78367 333 aa17.38■□□□□ 0.37
CCM2-215ENST00000482714 LAMC2Q13753 1193 aa17.38■□□□□ 0.37
CCM2-215ENST00000482714 TRPV1Q8NER1 839 aa17.38■□□□□ 0.37
CCM2-215ENST00000482714 SH3TC2Q8TF17 1288 aa17.38■□□□□ 0.37
CCM2-215ENST00000482714 LENG9Q96B70 501 aa17.38■□□□□ 0.37
CCM2-215ENST00000482714 RIT2Q99578 217 aa17.38■□□□□ 0.37
CCM2-215ENST00000482714 AGO4Q9HCK5 861 aaKnown RBP17.38■□□□□ 0.37
CCM2-215ENST00000482714 PDGFCQ9NRA1 345 aa17.38■□□□□ 0.37
CCM2-215ENST00000482714 EIF4ENIF1Q9NRA8 985 aaKnown RBP17.38■□□□□ 0.37
CCM2-215ENST00000482714 CFAP45Q9UL16 551 aa17.38■□□□□ 0.37
CCM2-215ENST00000482714 MYH7BA7E2Y1 1941 aa17.38■□□□□ 0.37
CCM2-215ENST00000482714 TDP2O95551 362 aa17.37■□□□□ 0.37
CCM2-215ENST00000482714 ARP10275 920 aa17.37■□□□□ 0.37
CCM2-215ENST00000482714 TRIM32Q13049 653 aa17.37■□□□□ 0.37
CCM2-215ENST00000482714 PKP1Q13835 747 aa17.37■□□□□ 0.37
CCM2-215ENST00000482714 EMID1Q96A84 441 aaPredicted RBP17.37■□□□□ 0.37
CCM2-215ENST00000482714 ZNF333Q96JL9 665 aa17.37■□□□□ 0.37
CCM2-215ENST00000482714 KCNMB3Q9NPA1 279 aa17.37■□□□□ 0.37
CCM2-215ENST00000482714 GNEQ9Y223 722 aaKnown RBP17.37■□□□□ 0.37
CCM2-215ENST00000482714 MORC2Q9Y6X9 1032 aaPredicted RBP17.37■□□□□ 0.37
CCM2-215ENST00000482714 IPO5O00410 1097 aaKnown RBP17.37■□□□□ 0.37
CCM2-215ENST00000482714 NEMFO60524 1076 aa17.37■□□□□ 0.37
CCM2-215ENST00000482714 RARBP10826 455 aa17.37■□□□□ 0.37
CCM2-215ENST00000482714 ATP2B1P20020 1258 aa17.37■□□□□ 0.37
CCM2-215ENST00000482714 CNGA1P29973 690 aa17.37■□□□□ 0.37
CCM2-215ENST00000482714 ADCYAP1R1P41586 468 aa17.37■□□□□ 0.37
CCM2-215ENST00000482714 SEMA3FQ13275 785 aa17.37■□□□□ 0.37
CCM2-215ENST00000482714 ZNF174Q15697 407 aa17.37■□□□□ 0.37
CCM2-215ENST00000482714 SLC5A5Q92911 643 aa17.37■□□□□ 0.37
CCM2-215ENST00000482714 ZFP91Q96JP5 570 aaPredicted RBP17.37■□□□□ 0.37
CCM2-215ENST00000482714 SDF4Q9BRK5 362 aa17.37■□□□□ 0.37
CCM2-215ENST00000482714 ZNF577Q9BSK1 485 aa17.37■□□□□ 0.37
CCM2-215ENST00000482714 SPC25Q9HBM1 224 aa17.37■□□□□ 0.37
CCM2-215ENST00000482714 PAK6Q9NQU5 681 aaPredicted RBP17.37■□□□□ 0.37
CCM2-215ENST00000482714 DDX20Q9UHI6 824 aaKnown RBP17.37■□□□□ 0.37
CCM2-215ENST00000482714 DDX49Q9Y6V7 483 aaKnown RBP17.37■□□□□ 0.37
CCM2-215ENST00000482714 MCM3APO60318 1980 aa17.36■□□□□ 0.37
CCM2-215ENST00000482714 MSH4O15457 936 aa17.36■□□□□ 0.37
CCM2-215ENST00000482714 MARCH6O60337 910 aa17.36■□□□□ 0.37
CCM2-215ENST00000482714 GH1P01241 217 aa17.36■□□□□ 0.37
CCM2-215ENST00000482714 KCNA2P16389 499 aa17.36■□□□□ 0.37
CCM2-215ENST00000482714 SMPD1P17405 629 aa17.36■□□□□ 0.37
CCM2-215ENST00000482714 CCND3P30281 292 aaPredicted RBP17.36■□□□□ 0.37
CCM2-215ENST00000482714 MCM7P33993 719 aa17.36■□□□□ 0.37
CCM2-215ENST00000482714 CELF3Q5SZQ8 465 aaKnown RBP17.36■□□□□ 0.37
CCM2-215ENST00000482714 ARL6IP4Q66PJ3 421 aaKnown RBP17.36■□□□□ 0.37
CCM2-215ENST00000482714 METTL7BQ6UX53 244 aa17.36■□□□□ 0.37
CCM2-215ENST00000482714 DHX37Q8IY37 1157 aaKnown RBP17.36■□□□□ 0.37
CCM2-215ENST00000482714 MTMR9Q96QG7 549 aa17.36■□□□□ 0.37
CCM2-215ENST00000482714 POLR3EQ9NVU0 708 aa17.36■□□□□ 0.37
CCM2-215ENST00000482714 PCDHB6Q9Y5E3 794 aa17.36■□□□□ 0.37
CCM2-215ENST00000482714 ATP9AO75110 1047 aa17.35■□□□□ 0.37
CCM2-215ENST00000482714 PRPHP41219 470 aa17.35■□□□□ 0.37
CCM2-215ENST00000482714 GJA9P57773 515 aa17.35■□□□□ 0.37
CCM2-215ENST00000482714 SP2Q02086 613 aa17.35■□□□□ 0.37
CCM2-215ENST00000482714 PTGDRQ13258 359 aa17.35■□□□□ 0.37
CCM2-215ENST00000482714 CALCRLQ16602 461 aa17.35■□□□□ 0.37
CCM2-215ENST00000482714 BRDTQ58F21 947 aaPredicted RBP17.35■□□□□ 0.37
CCM2-215ENST00000482714 ANO1Q5XXA6 986 aa17.35■□□□□ 0.37
CCM2-215ENST00000482714 C4orf32Q8N8J7 132 aa17.35■□□□□ 0.37
CCM2-215ENST00000482714 ETNPPLQ8TBG4 499 aa17.35■□□□□ 0.37
CCM2-215ENST00000482714 XRN2Q9H0D6 950 aaKnown RBP eCLIP17.35■□□□□ 0.37
CCM2-215ENST00000482714 AP5M1Q9H0R1 490 aa17.35■□□□□ 0.37
CCM2-215ENST00000482714 RNF208Q9H0X6 261 aa17.35■□□□□ 0.37
CCM2-215ENST00000482714 MLXIPQ9HAP2 919 aa17.35■□□□□ 0.37
CCM2-215ENST00000482714 PCDHA12Q9UN75 941 aa17.35■□□□□ 0.37
CCM2-215ENST00000482714 KIAA1217Q5T5P2 1943 aa17.35■□□□□ 0.37
CCM2-215ENST00000482714 DHX15O43143 795 aaKnown RBP17.34■□□□□ 0.37
CCM2-215ENST00000482714 SLC37A4O43826 429 aa17.34■□□□□ 0.37
CCM2-215ENST00000482714 PPFIA4O75335 1185 aa17.34■□□□□ 0.37
CCM2-215ENST00000482714 ARIH2O95376 493 aa17.34■□□□□ 0.37
CCM2-215ENST00000482714 GJB1P08034 283 aa17.34■□□□□ 0.37
CCM2-215ENST00000482714 CCL5P13501 91 aa17.34■□□□□ 0.37
CCM2-215ENST00000482714 UBA1P22314 1058 aaKnown RBP17.34■□□□□ 0.37
CCM2-215ENST00000482714 LY6KQ17RY6 165 aa17.34■□□□□ 0.37
Retrieved 100 of 20,778 RNA–protein pairs in 24.1 ms