RNA–Protein interactions for RNA: ENST00000481875.1

GARNL3-217, Transcript of GTPase activating Rap/RanGAP domain like 3, humanhuman

TSL 4

Gene GARNL3, Length 639 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GARNL3-217ENST00000481875 MTCH2Q9Y6C9 303 aa13.42□□□□□ -0.26
GARNL3-217ENST00000481875 KLRF2D3W0D1 207 aa13.41□□□□□ -0.26
GARNL3-217ENST00000481875 SGSM2O43147 1006 aa13.41□□□□□ -0.26
GARNL3-217ENST00000481875 EFCAB14O75071 495 aa13.41□□□□□ -0.26
GARNL3-217ENST00000481875 RGS20O76081 388 aa13.41□□□□□ -0.26
GARNL3-217ENST00000481875 BMP1P13497 986 aa13.41□□□□□ -0.26
GARNL3-217ENST00000481875 TAP1Q03518 808 aa13.41□□□□□ -0.26
GARNL3-217ENST00000481875 AAK1Q2M2I8 961 aa13.41□□□□□ -0.26
GARNL3-217ENST00000481875 IFIT1BQ5T764 474 aaKnown RBP13.41□□□□□ -0.26
GARNL3-217ENST00000481875 ARHGEF16Q5VV41 709 aa13.41□□□□□ -0.26
GARNL3-217ENST00000481875 MYSM1Q5VVJ2 828 aa13.41□□□□□ -0.26
GARNL3-217ENST00000481875 STAG2Q8N3U4 1231 aa13.41□□□□□ -0.26
GARNL3-217ENST00000481875 PDCD2LQ9BRP1 358 aa13.41□□□□□ -0.26
GARNL3-217ENST00000481875 RIOX1Q9H6W3 641 aa13.41□□□□□ -0.26
GARNL3-217ENST00000481875 MAD2L2Q9UI95 211 aa13.41□□□□□ -0.26
GARNL3-217ENST00000481875 NOD1Q9Y239 953 aa13.41□□□□□ -0.26
GARNL3-217ENST00000481875 TCF20Q9UGU0 1960 aaKnown RBP13.41□□□□□ -0.26
GARNL3-217ENST00000481875 ABHD14A-ACY1A0A1B0GW23 586 aa13.4□□□□□ -0.26
GARNL3-217ENST00000481875 HOXC8P31273 242 aa13.4□□□□□ -0.26
GARNL3-217ENST00000481875 PTK7Q13308 1070 aa13.4□□□□□ -0.26
GARNL3-217ENST00000481875 TRIM71Q2Q1W2 868 aaKnown RBP13.4□□□□□ -0.26
GARNL3-217ENST00000481875 CNKSR3Q6P9H4 555 aa13.4□□□□□ -0.26
GARNL3-217ENST00000481875 LRRC8DQ7L1W4 858 aa13.4□□□□□ -0.26
GARNL3-217ENST00000481875 SPRYD3Q8NCJ5 442 aa13.4□□□□□ -0.26
GARNL3-217ENST00000481875 ADAMTS19Q8TE59 1207 aa13.4□□□□□ -0.26
GARNL3-217ENST00000481875 PPM1EQ8WY54 764 aa13.4□□□□□ -0.26
GARNL3-217ENST00000481875 DHX38Q92620 1227 aaKnown RBP13.4□□□□□ -0.26
GARNL3-217ENST00000481875 FTOQ9C0B1 505 aaKnown RBP eCLIP13.4□□□□□ -0.26
GARNL3-217ENST00000481875 HDAC6Q9UBN7 1215 aa13.4□□□□□ -0.26
GARNL3-217ENST00000481875 COG5Q9UP83 839 aa13.4□□□□□ -0.26
GARNL3-217ENST00000481875 MICAL3Q7RTP6 2002 aa13.39□□□□□ -0.27
GARNL3-217ENST00000481875 KAT6AQ92794 2004 aa13.39□□□□□ -0.27
GARNL3-217ENST00000481875 GTPBP6O43824 516 aaPredicted RBP13.39□□□□□ -0.27
GARNL3-217ENST00000481875 EIF5BO60841 1220 aaKnown RBP13.39□□□□□ -0.27
GARNL3-217ENST00000481875 PPP1R11O60927 126 aaPredicted RBP13.39□□□□□ -0.27
GARNL3-217ENST00000481875 STAM2O75886 525 aa13.39□□□□□ -0.27
GARNL3-217ENST00000481875 CFBP00751 764 aa13.39□□□□□ -0.27
GARNL3-217ENST00000481875 CKBP12277 381 aa13.39□□□□□ -0.27
GARNL3-217ENST00000481875 WDR5P61964 334 aaKnown RBP13.39□□□□□ -0.27
GARNL3-217ENST00000481875 CCDC85BQ15834 202 aaPredicted RBP13.39□□□□□ -0.27
GARNL3-217ENST00000481875 CELF3Q5SZQ8 465 aaKnown RBP13.39□□□□□ -0.27
GARNL3-217ENST00000481875 TRAF7Q6Q0C0 670 aa13.39□□□□□ -0.27
GARNL3-217ENST00000481875 DHX37Q8IY37 1157 aaKnown RBP13.39□□□□□ -0.27
GARNL3-217ENST00000481875 C7orf31Q8N865 590 aa13.39□□□□□ -0.27
GARNL3-217ENST00000481875 ANO2Q9NQ90 1003 aa13.39□□□□□ -0.27
GARNL3-217ENST00000481875 PCDHA1Q9Y5I3 950 aa13.39□□□□□ -0.27
GARNL3-217ENST00000481875 MRVI1Q9Y6F6 885 aa13.39□□□□□ -0.27
GARNL3-217ENST00000481875 FRMPD4Q14CM0 1322 aa13.39□□□□□ -0.27
GARNL3-217ENST00000481875 LPXNO60711 386 aa13.38□□□□□ -0.27
GARNL3-217ENST00000481875 NBNO60934 754 aa13.38□□□□□ -0.27
GARNL3-217ENST00000481875 GJB5O95377 273 aa13.38□□□□□ -0.27
GARNL3-217ENST00000481875 EIF2AK2P19525 551 aaKnown RBP13.38□□□□□ -0.27
GARNL3-217ENST00000481875 SMARCA1P28370 1054 aa13.38□□□□□ -0.27
GARNL3-217ENST00000481875 KCNJ6P48051 423 aa13.38□□□□□ -0.27
GARNL3-217ENST00000481875 PSEN2P49810 448 aa13.38□□□□□ -0.27
GARNL3-217ENST00000481875 TROAPQ12815 778 aa13.38□□□□□ -0.27
GARNL3-217ENST00000481875 MFSD10Q14728 455 aa13.38□□□□□ -0.27
GARNL3-217ENST00000481875 GRM4Q14833 912 aa13.38□□□□□ -0.27
GARNL3-217ENST00000481875 PGM5Q15124 567 aa13.38□□□□□ -0.27
GARNL3-217ENST00000481875 KIAA0753Q2KHM9 967 aa13.38□□□□□ -0.27
GARNL3-217ENST00000481875 CYB5R4Q7L1T6 521 aa13.38□□□□□ -0.27
GARNL3-217ENST00000481875 UHRF1Q96T88 793 aaPredicted RBP13.38□□□□□ -0.27
GARNL3-217ENST00000481875 MAP3K14Q99558 947 aa13.38□□□□□ -0.27
GARNL3-217ENST00000481875 C16orf70Q9BSU1 422 aa13.38□□□□□ -0.27
GARNL3-217ENST00000481875 IL25Q9H293 177 aa13.38□□□□□ -0.27
GARNL3-217ENST00000481875 VAT1LQ9HCJ6 419 aa13.38□□□□□ -0.27
GARNL3-217ENST00000481875 SIP14410 1827 aa13.38□□□□□ -0.27
GARNL3-217ENST00000481875 EMSYQ7Z589 1322 aa13.38□□□□□ -0.27
GARNL3-217ENST00000481875 PNMA6FA0A0J9YX94 578 aa13.37□□□□□ -0.27
GARNL3-217ENST00000481875 EPOPA6NHQ4 379 aa13.37□□□□□ -0.27
GARNL3-217ENST00000481875 TLL1O43897 1013 aa13.37□□□□□ -0.27
GARNL3-217ENST00000481875 DHX16O60231 1041 aaKnown RBP13.37□□□□□ -0.27
GARNL3-217ENST00000481875 REC8O95072 547 aa13.37□□□□□ -0.27
GARNL3-217ENST00000481875 ICAM3P32942 547 aa13.37□□□□□ -0.27
GARNL3-217ENST00000481875 TRDNQ13061 729 aa13.37□□□□□ -0.27
GARNL3-217ENST00000481875 SLC35G1Q2M3R5 365 aa13.37□□□□□ -0.27
GARNL3-217ENST00000481875 HSDL1Q3SXM5 330 aa13.37□□□□□ -0.27
GARNL3-217ENST00000481875 SERINC5Q86VE9 423 aa13.37□□□□□ -0.27
GARNL3-217ENST00000481875 RAD9AQ99638 391 aa13.37□□□□□ -0.27
GARNL3-217ENST00000481875 MTA3Q9BTC8 594 aa13.37□□□□□ -0.27
GARNL3-217ENST00000481875 GCOM1H8Y6P7 765 aaPredicted RBP13.36□□□□□ -0.27
GARNL3-217ENST00000481875 CYTH3O43739 400 aa13.36□□□□□ -0.27
GARNL3-217ENST00000481875 CAND2O75155 1236 aa13.36□□□□□ -0.27
GARNL3-217ENST00000481875 ARHGEF15O94989 841 aa13.36□□□□□ -0.27
GARNL3-217ENST00000481875 CYP21A2P08686 494 aa13.36□□□□□ -0.27
GARNL3-217ENST00000481875 POLR2MP0CAP2 368 aa13.36□□□□□ -0.27
GARNL3-217ENST00000481875 ERVK-21P61565 698 aa13.36□□□□□ -0.27
GARNL3-217ENST00000481875 SP2Q02086 613 aa13.36□□□□□ -0.27
GARNL3-217ENST00000481875 PTH1RQ03431 593 aa13.36□□□□□ -0.27
GARNL3-217ENST00000481875 IKBKEQ14164 716 aa13.36□□□□□ -0.27
GARNL3-217ENST00000481875 C8orf34Q49A92 452 aa13.36□□□□□ -0.27
GARNL3-217ENST00000481875 CHST3Q7LGC8 479 aa13.36□□□□□ -0.27
GARNL3-217ENST00000481875 PPP1R13LQ8WUF5 828 aa13.36□□□□□ -0.27
GARNL3-217ENST00000481875 SPATA33Q96N06 139 aa13.36□□□□□ -0.27
GARNL3-217ENST00000481875 INPP4AQ96PE3 977 aaPredicted RBP13.36□□□□□ -0.27
GARNL3-217ENST00000481875 USP26Q9BXU7 913 aa13.36□□□□□ -0.27
GARNL3-217ENST00000481875 RIOK3O14730 519 aaKnown RBP13.35□□□□□ -0.27
GARNL3-217ENST00000481875 UBA1P22314 1058 aaKnown RBP13.35□□□□□ -0.27
GARNL3-217ENST00000481875 CCND2P30279 289 aa13.35□□□□□ -0.27
GARNL3-217ENST00000481875 GRB10Q13322 594 aa13.35□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 11.4 ms