RNA–Protein interactions for RNA: ENST00000481335.5

SQSTM1-207, Transcript of sequestosome 1, humanhuman

TSL 4

Gene SQSTM1, Length 562 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SQSTM1-207ENST00000481335 SH2B2O14492 632 aaPredicted RBP14.01□□□□□ -0.17
SQSTM1-207ENST00000481335 SLC27A2O14975 620 aa14.01□□□□□ -0.17
SQSTM1-207ENST00000481335 MYCLP12524 364 aaPredicted RBP14.01□□□□□ -0.17
SQSTM1-207ENST00000481335 ATP2A2P16615 1042 aaKnown RBP14.01□□□□□ -0.17
SQSTM1-207ENST00000481335 UBA1P22314 1058 aaKnown RBP14.01□□□□□ -0.17
SQSTM1-207ENST00000481335 ICAM3P32942 547 aa14.01□□□□□ -0.17
SQSTM1-207ENST00000481335 NECTIN1Q15223 517 aa14.01□□□□□ -0.17
SQSTM1-207ENST00000481335 C7orf31Q8N865 590 aa14.01□□□□□ -0.17
SQSTM1-207ENST00000481335 CUL5Q93034 780 aa14.01□□□□□ -0.17
SQSTM1-207ENST00000481335 INPP4AQ96PE3 977 aaPredicted RBP14.01□□□□□ -0.17
SQSTM1-207ENST00000481335 SLC28A3Q9HAS3 691 aa14.01□□□□□ -0.17
SQSTM1-207ENST00000481335 KAT6AQ92794 2004 aa14.01□□□□□ -0.17
SQSTM1-207ENST00000481335 TRANK1O15050 2925 aa14□□□□□ -0.17
SQSTM1-207ENST00000481335 ZBBXA8MT70 800 aa14□□□□□ -0.17
SQSTM1-207ENST00000481335 GGPS1O95749 300 aa14□□□□□ -0.17
SQSTM1-207ENST00000481335 SELPP16109 830 aa14□□□□□ -0.17
SQSTM1-207ENST00000481335 PBX2P40425 430 aa14□□□□□ -0.17
SQSTM1-207ENST00000481335 PSEN2P49810 448 aa14□□□□□ -0.17
SQSTM1-207ENST00000481335 PTK7Q13308 1070 aa14□□□□□ -0.17
SQSTM1-207ENST00000481335 NEDD9Q14511 834 aa14□□□□□ -0.17
SQSTM1-207ENST00000481335 MFSD10Q14728 455 aa14□□□□□ -0.17
SQSTM1-207ENST00000481335 KIAA0753Q2KHM9 967 aa14□□□□□ -0.17
SQSTM1-207ENST00000481335 CREB3L3Q68CJ9 461 aa14□□□□□ -0.17
SQSTM1-207ENST00000481335 GDF6Q6KF10 455 aaPredicted RBP14□□□□□ -0.17
SQSTM1-207ENST00000481335 NFXL1Q6ZNB6 911 aa14□□□□□ -0.17
SQSTM1-207ENST00000481335 SGMS1Q86VZ5 419 aa14□□□□□ -0.17
SQSTM1-207ENST00000481335 FCHSD1Q86WN1 690 aa14□□□□□ -0.17
SQSTM1-207ENST00000481335 SPATA33Q96N06 139 aa14□□□□□ -0.17
SQSTM1-207ENST00000481335 ANO2Q9NQ90 1003 aa14□□□□□ -0.17
SQSTM1-207ENST00000481335 DOCK5Q9H7D0 1870 aa13.99□□□□□ -0.17
SQSTM1-207ENST00000481335 GRXCR1A8MXD5 290 aa13.99□□□□□ -0.17
SQSTM1-207ENST00000481335 FIBPO43427 364 aa13.99□□□□□ -0.17
SQSTM1-207ENST00000481335 EFCAB14O75071 495 aa13.99□□□□□ -0.17
SQSTM1-207ENST00000481335 HSDL1Q3SXM5 330 aa13.99□□□□□ -0.17
SQSTM1-207ENST00000481335 PCNX4Q63HM2 1172 aa13.99□□□□□ -0.17
SQSTM1-207ENST00000481335 METTL7BQ6UX53 244 aa13.99□□□□□ -0.17
SQSTM1-207ENST00000481335 LRRC8DQ7L1W4 858 aa13.99□□□□□ -0.17
SQSTM1-207ENST00000481335 DEFB128Q7Z7B8 93 aa13.99□□□□□ -0.17
SQSTM1-207ENST00000481335 GIMAP8Q8ND71 665 aaPredicted RBP13.99□□□□□ -0.17
SQSTM1-207ENST00000481335 IL31RAQ8NI17 732 aa13.99□□□□□ -0.17
SQSTM1-207ENST00000481335 SMARCC2Q8TAQ2 1214 aa13.99□□□□□ -0.17
SQSTM1-207ENST00000481335 CTAGE1Q96RT6 745 aa13.99□□□□□ -0.17
SQSTM1-207ENST00000481335 SENP7Q9BQF6 1050 aa13.99□□□□□ -0.17
SQSTM1-207ENST00000481335 MLXIPQ9HAP2 919 aa13.99□□□□□ -0.17
SQSTM1-207ENST00000481335 HDAC6Q9UBN7 1215 aa13.99□□□□□ -0.17
SQSTM1-207ENST00000481335 SLC12A7Q9Y666 1083 aa13.99□□□□□ -0.17
SQSTM1-207ENST00000481335 PTPRSQ13332 1948 aa13.99□□□□□ -0.17
SQSTM1-207ENST00000481335 CXCL10P02778 98 aa13.98□□□□□ -0.17
SQSTM1-207ENST00000481335 ZNF286BP0CG31 522 aa13.98□□□□□ -0.17
SQSTM1-207ENST00000481335 MRPS9P82933 396 aaKnown RBP13.98□□□□□ -0.17
SQSTM1-207ENST00000481335 TSGA10IPQ3SY00 556 aa13.98□□□□□ -0.17
SQSTM1-207ENST00000481335 CDHR1Q96JP9 859 aa13.98□□□□□ -0.17
SQSTM1-207ENST00000481335 USP26Q9BXU7 913 aa13.98□□□□□ -0.17
SQSTM1-207ENST00000481335 YBX2Q9Y2T7 364 aaKnown RBP13.98□□□□□ -0.17
SQSTM1-207ENST00000481335 EMSYQ7Z589 1322 aa13.97□□□□□ -0.17
SQSTM1-207ENST00000481335 MICAL3Q7RTP6 2002 aa13.97□□□□□ -0.17
SQSTM1-207ENST00000481335 SPATA31C2B4DYI2 1134 aa13.97□□□□□ -0.17
SQSTM1-207ENST00000481335 KIF28PB7ZC32 967 aa13.97□□□□□ -0.17
SQSTM1-207ENST00000481335 NOP56O00567 594 aaKnown RBP13.97□□□□□ -0.17
SQSTM1-207ENST00000481335 MEIS2O14770 477 aa13.97□□□□□ -0.17
SQSTM1-207ENST00000481335 CAND2O75155 1236 aa13.97□□□□□ -0.17
SQSTM1-207ENST00000481335 CKBP12277 381 aa13.97□□□□□ -0.17
SQSTM1-207ENST00000481335 HOXC8P31273 242 aa13.97□□□□□ -0.17
SQSTM1-207ENST00000481335 RCAN1P53805 252 aa13.97□□□□□ -0.17
SQSTM1-207ENST00000481335 CHMP4BP1P59074 171 aa13.97□□□□□ -0.17
SQSTM1-207ENST00000481335 SP2Q02086 613 aa13.97□□□□□ -0.17
SQSTM1-207ENST00000481335 KRT32Q14532 448 aa13.97□□□□□ -0.17
SQSTM1-207ENST00000481335 PPP2R2DQ66LE6 453 aa13.97□□□□□ -0.17
SQSTM1-207ENST00000481335 CNKSR3Q6P9H4 555 aa13.97□□□□□ -0.17
SQSTM1-207ENST00000481335 SYNE3Q6ZMZ3 975 aa13.97□□□□□ -0.17
SQSTM1-207ENST00000481335 NLRX1Q86UT6 975 aa13.97□□□□□ -0.17
SQSTM1-207ENST00000481335 SRBD1Q8N5C6 995 aaKnown RBP13.97□□□□□ -0.17
SQSTM1-207ENST00000481335 FANCBQ8NB91 859 aa13.97□□□□□ -0.17
SQSTM1-207ENST00000481335 DHX38Q92620 1227 aaKnown RBP13.97□□□□□ -0.17
SQSTM1-207ENST00000481335 SYMPKQ92797 1274 aaKnown RBP13.97□□□□□ -0.17
SQSTM1-207ENST00000481335 C16orf70Q9BSU1 422 aa13.97□□□□□ -0.17
SQSTM1-207ENST00000481335 MYL10Q9BUA6 226 aa13.97□□□□□ -0.17
SQSTM1-207ENST00000481335 FTOQ9C0B1 505 aaKnown RBP eCLIP13.97□□□□□ -0.178e-6■■■□□ 15.4
SQSTM1-207ENST00000481335 NKX2-4Q9H2Z4 354 aa13.97□□□□□ -0.17
SQSTM1-207ENST00000481335 RBM28Q9NW13 759 aaKnown RBP13.97□□□□□ -0.17
SQSTM1-207ENST00000481335 TTC28Q96AY4 2481 aa13.97□□□□□ -0.17
SQSTM1-207ENST00000481335 H3BRB1 525 aa13.96□□□□□ -0.17
SQSTM1-207ENST00000481335 hCG_1984214I3L0E3 225 aa13.96□□□□□ -0.17
SQSTM1-207ENST00000481335 PLEKHA8P1O95397 391 aa13.96□□□□□ -0.17
SQSTM1-207ENST00000481335 HMGB1P09429 215 aaKnown RBP13.96□□□□□ -0.17
SQSTM1-207ENST00000481335 KCNJ6P48051 423 aa13.96□□□□□ -0.17
SQSTM1-207ENST00000481335 TMTC3Q6ZXV5 915 aa13.96□□□□□ -0.17
SQSTM1-207ENST00000481335 SERINC5Q86VE9 423 aa13.96□□□□□ -0.17
SQSTM1-207ENST00000481335 ZNF713Q8N859 430 aaPredicted RBP13.96□□□□□ -0.17
SQSTM1-207ENST00000481335 GPRASP2Q96D09 838 aa13.96□□□□□ -0.17
SQSTM1-207ENST00000481335 NEK1Q96PY6 1258 aa13.96□□□□□ -0.17
SQSTM1-207ENST00000481335 ALG1Q9BT22 464 aa13.96□□□□□ -0.17
SQSTM1-207ENST00000481335 PRDM12Q9H4Q4 367 aa13.96□□□□□ -0.17
SQSTM1-207ENST00000481335 TUT1Q9H6E5 874 aaKnown RBP13.96□□□□□ -0.17
SQSTM1-207ENST00000481335 PSTPIP2Q9H939 334 aa13.96□□□□□ -0.17
SQSTM1-207ENST00000481335 EHMT1Q9H9B1 1298 aa13.96□□□□□ -0.17
SQSTM1-207ENST00000481335 ZNF215Q9UL58 517 aaPredicted RBP13.96□□□□□ -0.17
SQSTM1-207ENST00000481335 SPTBN5Q9NRC6 3674 aaKnown RBP13.95□□□□□ -0.18
SQSTM1-207ENST00000481335 ABHD14A-ACY1A0A1B0GW23 586 aa13.95□□□□□ -0.18
SQSTM1-207ENST00000481335 C17orf102A2RUQ5 167 aa13.95□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 30.4 ms