RNA–Protein interactions for RNA: ENST00000480562.3

ABCF3-214, Transcript of ATP binding cassette subfamily F member 3, humanhuman

TSL 1 (best)

Gene ABCF3, Length 1,182 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ABCF3-214ENST00000480562 MB21D2Q8IYB1 491 aaPredicted RBP21.82■■□□□ 1.08
ABCF3-214ENST00000480562 SAMD3Q8N6K7 520 aa21.82■■□□□ 1.08
ABCF3-214ENST00000480562 IGDCC4Q8TDY8 1250 aa21.82■■□□□ 1.08
ABCF3-214ENST00000480562 SYMPKQ92797 1274 aaKnown RBP21.82■■□□□ 1.08
ABCF3-214ENST00000480562 MAP4K1Q92918 833 aa21.82■■□□□ 1.08
ABCF3-214ENST00000480562 SPATA33Q96N06 139 aa21.82■■□□□ 1.08
ABCF3-214ENST00000480562 KATNAL1Q9BW62 490 aa21.82■■□□□ 1.08
ABCF3-214ENST00000480562 RBM8AQ9Y5S9 174 aaKnown RBP21.82■■□□□ 1.08
ABCF3-214ENST00000480562 HAS3O00219 553 aa21.81■■□□□ 1.08
ABCF3-214ENST00000480562 UBA1P22314 1058 aaKnown RBP21.81■■□□□ 1.08
ABCF3-214ENST00000480562 CCND2P30279 289 aa21.81■■□□□ 1.08
ABCF3-214ENST00000480562 ZNF200P98182 395 aaPredicted RBP21.81■■□□□ 1.08
ABCF3-214ENST00000480562 TRAF1Q13077 416 aa21.81■■□□□ 1.08
ABCF3-214ENST00000480562 HSDL1Q3SXM5 330 aa21.81■■□□□ 1.08
ABCF3-214ENST00000480562 KCNV1Q6PIU1 500 aa21.81■■□□□ 1.08
ABCF3-214ENST00000480562 HERC6Q8IVU3 1022 aa21.81■■□□□ 1.08
ABCF3-214ENST00000480562 MICALL1Q8N3F8 863 aa21.81■■□□□ 1.08
ABCF3-214ENST00000480562 PHOSPHO2Q8TCD6 241 aa21.81■■□□□ 1.08
ABCF3-214ENST00000480562 PPFIA4O75335 1185 aa21.8■■□□□ 1.08
ABCF3-214ENST00000480562 ARHGEF15O94989 841 aa21.8■■□□□ 1.08
ABCF3-214ENST00000480562 CKBP12277 381 aa21.8■■□□□ 1.08
ABCF3-214ENST00000480562 HOXD8P13378 290 aaPredicted RBP21.8■■□□□ 1.08
ABCF3-214ENST00000480562 WNT8BQ93098 351 aa21.8■■□□□ 1.08
ABCF3-214ENST00000480562 MYL10Q9BUA6 226 aa21.8■■□□□ 1.08
ABCF3-214ENST00000480562 THEGQ9P2T0 379 aa21.8■■□□□ 1.08
ABCF3-214ENST00000480562 NBNO60934 754 aa21.79■■□□□ 1.08
ABCF3-214ENST00000480562 BAIAP3O94812 1187 aa21.79■■□□□ 1.08
ABCF3-214ENST00000480562 RBL2Q08999 1139 aa21.79■■□□□ 1.08
ABCF3-214ENST00000480562 HIC1Q14526 733 aa21.79■■□□□ 1.08
ABCF3-214ENST00000480562 TMCO2Q7Z6W1 182 aaPredicted RBP21.79■■□□□ 1.08
ABCF3-214ENST00000480562 BCAS3Q9H6U6 928 aa21.79■■□□□ 1.08
ABCF3-214ENST00000480562 MLXIPQ9HAP2 919 aa21.79■■□□□ 1.08
ABCF3-214ENST00000480562 EPOPA6NHQ4 379 aa21.78■■□□□ 1.08
ABCF3-214ENST00000480562 KIF28PB7ZC32 967 aa21.78■■□□□ 1.08
ABCF3-214ENST00000480562 TGFB3P10600 412 aa21.78■■□□□ 1.08
ABCF3-214ENST00000480562 KCNJ6P48051 423 aa21.78■■□□□ 1.08
ABCF3-214ENST00000480562 TAP1Q03518 808 aa21.78■■□□□ 1.08
ABCF3-214ENST00000480562 PTK7Q13308 1070 aa21.78■■□□□ 1.08
ABCF3-214ENST00000480562 TCTN1Q2MV58 587 aa21.78■■□□□ 1.08
ABCF3-214ENST00000480562 TRIM71Q2Q1W2 868 aaKnown RBP21.78■■□□□ 1.08
ABCF3-214ENST00000480562 ZNF654Q8IZM8 581 aa21.78■■□□□ 1.08
ABCF3-214ENST00000480562 ATXN2LQ8WWM7 1075 aaKnown RBP21.78■■□□□ 1.08
ABCF3-214ENST00000480562 LY9Q9HBG7 655 aa21.78■■□□□ 1.08
ABCF3-214ENST00000480562 WDR5P61964 334 aaKnown RBP21.77■■□□□ 1.08
ABCF3-214ENST00000480562 MRPS9P82933 396 aaKnown RBP21.77■■□□□ 1.08
ABCF3-214ENST00000480562 ZNF618Q5T7W0 954 aa21.77■■□□□ 1.08
ABCF3-214ENST00000480562 TRAF7Q6Q0C0 670 aa21.77■■□□□ 1.08
ABCF3-214ENST00000480562 ARNTL2Q8WYA1 636 aa21.77■■□□□ 1.08
ABCF3-214ENST00000480562 ASB2Q96Q27 587 aa21.77■■□□□ 1.08
ABCF3-214ENST00000480562 C16orf70Q9BSU1 422 aa21.77■■□□□ 1.08
ABCF3-214ENST00000480562 RTEL1Q9NZ71 1219 aa21.77■■□□□ 1.08
ABCF3-214ENST00000480562 TRANK1O15050 2925 aa21.76■■□□□ 1.07
ABCF3-214ENST00000480562 PRC1O43663 620 aa21.76■■□□□ 1.07
ABCF3-214ENST00000480562 TLL1O43897 1013 aa21.76■■□□□ 1.07
ABCF3-214ENST00000480562 CXCL10P02778 98 aa21.76■■□□□ 1.07
ABCF3-214ENST00000480562 DEFB103AP81534 67 aa21.76■■□□□ 1.07
ABCF3-214ENST00000480562 COL9A3Q14050 684 aaPredicted RBP21.76■■□□□ 1.07
ABCF3-214ENST00000480562 CNKSR3Q6P9H4 555 aa21.76■■□□□ 1.07
ABCF3-214ENST00000480562 CASC1Q6TDU7 716 aa21.76■■□□□ 1.07
ABCF3-214ENST00000480562 SPRED2Q7Z698 418 aa21.76■■□□□ 1.07
ABCF3-214ENST00000480562 CTCFLQ8NI51 663 aaPredicted RBP21.76■■□□□ 1.07
ABCF3-214ENST00000480562 REV3LO60673 3130 aa21.76■■□□□ 1.07
ABCF3-214ENST00000480562 PTPRSQ13332 1948 aa21.76■■□□□ 1.07
ABCF3-214ENST00000480562 LCHNA4D1U4 455 aa21.75■■□□□ 1.07
ABCF3-214ENST00000480562 DDAH1O94760 285 aa21.75■■□□□ 1.07
ABCF3-214ENST00000480562 PARNO95453 639 aaKnown RBP21.75■■□□□ 1.07
ABCF3-214ENST00000480562 MRPS5P82675 430 aaKnown RBP21.75■■□□□ 1.07
ABCF3-214ENST00000480562 MBTPS1Q14703 1052 aa21.75■■□□□ 1.07
ABCF3-214ENST00000480562 GNPTABQ3T906 1256 aa21.75■■□□□ 1.07
ABCF3-214ENST00000480562 KRT40Q6A162 431 aa21.75■■□□□ 1.07
ABCF3-214ENST00000480562 USP17L6PQ6QN14 398 aa21.75■■□□□ 1.07
ABCF3-214ENST00000480562 RRP36Q96EU6 259 aaKnown RBP21.75■■□□□ 1.07
ABCF3-214ENST00000480562 SPZ1Q9BXG8 430 aa21.75■■□□□ 1.07
ABCF3-214ENST00000480562 LSG1Q9H089 658 aaKnown RBP21.75■■□□□ 1.07
ABCF3-214ENST00000480562 MTCH2Q9Y6C9 303 aa21.75■■□□□ 1.07
ABCF3-214ENST00000480562 FRMPD4Q14CM0 1322 aa21.75■■□□□ 1.07
ABCF3-214ENST00000480562 PRRC2BQ5JSZ5 2229 aaKnown RBP21.74■■□□□ 1.07
ABCF3-214ENST00000480562 SPATA31C2B4DYI2 1134 aa21.74■■□□□ 1.07
ABCF3-214ENST00000480562 PLEKHA8P1O95397 391 aa21.74■■□□□ 1.07
ABCF3-214ENST00000480562 LGALS2P05162 132 aa21.74■■□□□ 1.07
ABCF3-214ENST00000480562 KIF5BP33176 963 aa21.74■■□□□ 1.07
ABCF3-214ENST00000480562 SEMA3FQ13275 785 aa21.74■■□□□ 1.07
ABCF3-214ENST00000480562 NFXL1Q6ZNB6 911 aa21.74■■□□□ 1.07
ABCF3-214ENST00000480562 CMTR1Q8N1G2 835 aaKnown RBP21.74■■□□□ 1.07
ABCF3-214ENST00000480562 SMARCC2Q8TAQ2 1214 aa21.74■■□□□ 1.07
ABCF3-214ENST00000480562 INPP4AQ96PE3 977 aaPredicted RBP21.74■■□□□ 1.07
ABCF3-214ENST00000480562 MAP3K14Q99558 947 aa21.74■■□□□ 1.07
ABCF3-214ENST00000480562 ZBED2Q9BTP6 218 aa21.74■■□□□ 1.07
ABCF3-214ENST00000480562 H3BRB1 525 aa21.73■■□□□ 1.07
ABCF3-214ENST00000480562 NOP56O00567 594 aaKnown RBP21.73■■□□□ 1.07
ABCF3-214ENST00000480562 SH2B2O14492 632 aaPredicted RBP21.73■■□□□ 1.07
ABCF3-214ENST00000480562 GTPBP6O43824 516 aaPredicted RBP21.73■■□□□ 1.07
ABCF3-214ENST00000480562 RXRAP19793 462 aa21.73■■□□□ 1.07
ABCF3-214ENST00000480562 ICAM3P32942 547 aa21.73■■□□□ 1.07
ABCF3-214ENST00000480562 MCM5P33992 734 aa21.73■■□□□ 1.07
ABCF3-214ENST00000480562 THPOP40225 353 aa21.73■■□□□ 1.07
ABCF3-214ENST00000480562 SKIV2LQ15477 1246 aaKnown RBP21.73■■□□□ 1.07
ABCF3-214ENST00000480562 CYFIP1Q7L576 1253 aa21.73■■□□□ 1.07
ABCF3-214ENST00000480562 SERINC5Q86VE9 423 aa21.73■■□□□ 1.07
ABCF3-214ENST00000480562 RAB11FIP4Q86YS3 637 aa21.73■■□□□ 1.07
Retrieved 100 of 20,778 RNA–protein pairs in 25.6 ms