RNA–Protein interactions for RNA: ENST00000478914.1

XRCC6-208, Transcript of X-ray repair cross complementing 6, humanhuman

TSL 2

Gene XRCC6, Length 550 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
XRCC6-208ENST00000478914 KIAA0753Q2KHM9 967 aa10.07□□□□□ -0.8
XRCC6-208ENST00000478914 CELF3Q5SZQ8 465 aaKnown RBP10.07□□□□□ -0.8
XRCC6-208ENST00000478914 MYSM1Q5VVJ2 828 aa10.07□□□□□ -0.8
XRCC6-208ENST00000478914 SESTD1Q86VW0 696 aa10.07□□□□□ -0.8
XRCC6-208ENST00000478914 IL31RAQ8NI17 732 aa10.07□□□□□ -0.8
XRCC6-208ENST00000478914 CAGE1Q8TC20 777 aa10.07□□□□□ -0.8
XRCC6-208ENST00000478914 AFAP1L1Q8TED9 768 aa10.07□□□□□ -0.8
XRCC6-208ENST00000478914 COL25A1Q9BXS0 654 aaPredicted RBP10.07□□□□□ -0.8
XRCC6-208ENST00000478914 SLC28A3Q9HAS3 691 aa10.07□□□□□ -0.8
XRCC6-208ENST00000478914 CXXC1Q9P0U4 656 aaPredicted RBP10.07□□□□□ -0.8
XRCC6-208ENST00000478914 GTF2IRD1Q9UHL9 959 aa10.07□□□□□ -0.8
XRCC6-208ENST00000478914 TET1Q8NFU7 2136 aa10.07□□□□□ -0.8
XRCC6-208ENST00000478914 PPFIA4O75335 1185 aa10.06□□□□□ -0.8
XRCC6-208ENST00000478914 RGS20O76081 388 aa10.06□□□□□ -0.8
XRCC6-208ENST00000478914 PLEKHA8P1O95397 391 aa10.06□□□□□ -0.8
XRCC6-208ENST00000478914 PARNO95453 639 aaKnown RBP10.06□□□□□ -0.8
XRCC6-208ENST00000478914 IQCF3P0C7M6 154 aa10.06□□□□□ -0.8
XRCC6-208ENST00000478914 ATP2A2P16615 1042 aaKnown RBP10.06□□□□□ -0.8
XRCC6-208ENST00000478914 RXRAP19793 462 aa10.06□□□□□ -0.8
XRCC6-208ENST00000478914 UBA1P22314 1058 aaKnown RBP10.06□□□□□ -0.8
XRCC6-208ENST00000478914 PBX2P40425 430 aa10.06□□□□□ -0.8
XRCC6-208ENST00000478914 NEDD9Q14511 834 aa10.06□□□□□ -0.8
XRCC6-208ENST00000478914 KRT32Q14532 448 aa10.06□□□□□ -0.8
XRCC6-208ENST00000478914 GRIN2CQ14957 1233 aa10.06□□□□□ -0.8
XRCC6-208ENST00000478914 GDF6Q6KF10 455 aaPredicted RBP10.06□□□□□ -0.8
XRCC6-208ENST00000478914 NLRX1Q86UT6 975 aa10.06□□□□□ -0.8
XRCC6-208ENST00000478914 MICU3Q86XE3 530 aa10.06□□□□□ -0.8
XRCC6-208ENST00000478914 PHF6Q8IWS0 365 aaKnown RBP eCLIP10.06□□□□□ -0.8
XRCC6-208ENST00000478914 KAT2BQ92831 832 aa10.06□□□□□ -0.8
XRCC6-208ENST00000478914 CCDC136Q96JN2 1154 aa10.06□□□□□ -0.8
XRCC6-208ENST00000478914 ZFP91Q96JP5 570 aaPredicted RBP10.06□□□□□ -0.8
XRCC6-208ENST00000478914 NEK1Q96PY6 1258 aa10.06□□□□□ -0.8
XRCC6-208ENST00000478914 LRRC2Q9BYS8 371 aa10.06□□□□□ -0.8
XRCC6-208ENST00000478914 NKX2-4Q9H2Z4 354 aa10.06□□□□□ -0.8
XRCC6-208ENST00000478914 EHMT1Q9H9B1 1298 aa10.06□□□□□ -0.8
XRCC6-208ENST00000478914 HDAC6Q9UBN7 1215 aa10.06□□□□□ -0.8
XRCC6-208ENST00000478914 FRMPD4Q14CM0 1322 aa10.06□□□□□ -0.8
XRCC6-208ENST00000478914 PTPRSQ13332 1948 aa10.05□□□□□ -0.8
XRCC6-208ENST00000478914 PIK3CDO00329 1044 aa10.05□□□□□ -0.8
XRCC6-208ENST00000478914 FIBPO43427 364 aa10.05□□□□□ -0.8
XRCC6-208ENST00000478914 F2P00734 622 aa10.05□□□□□ -0.8
XRCC6-208ENST00000478914 SELPP16109 830 aa10.05□□□□□ -0.8
XRCC6-208ENST00000478914 KCNJ6P48051 423 aa10.05□□□□□ -0.8
XRCC6-208ENST00000478914 FGD1P98174 961 aa10.05□□□□□ -0.8
XRCC6-208ENST00000478914 PTK7Q13308 1070 aa10.05□□□□□ -0.8
XRCC6-208ENST00000478914 HSDL1Q3SXM5 330 aa10.05□□□□□ -0.8
XRCC6-208ENST00000478914 PCNX4Q63HM2 1172 aa10.05□□□□□ -0.8
XRCC6-208ENST00000478914 XRRA1Q6P2D8 792 aa10.05□□□□□ -0.8
XRCC6-208ENST00000478914 USP17L6PQ6QN14 398 aa10.05□□□□□ -0.8
XRCC6-208ENST00000478914 LRRC8DQ7L1W4 858 aa10.05□□□□□ -0.8
XRCC6-208ENST00000478914 RAB11FIP4Q86YS3 637 aa10.05□□□□□ -0.8
XRCC6-208ENST00000478914 CMTR1Q8N1G2 835 aaKnown RBP10.05□□□□□ -0.8
XRCC6-208ENST00000478914 CCDC82Q8N4S0 544 aa10.05□□□□□ -0.8
XRCC6-208ENST00000478914 SRBD1Q8N5C6 995 aaKnown RBP10.05□□□□□ -0.8
XRCC6-208ENST00000478914 FANCBQ8NB91 859 aa10.05□□□□□ -0.8
XRCC6-208ENST00000478914 SLC9A7Q96T83 725 aa10.05□□□□□ -0.8
XRCC6-208ENST00000478914 PSTPIP2Q9H939 334 aa10.05□□□□□ -0.8
XRCC6-208ENST00000478914 RBM28Q9NW13 759 aaKnown RBP10.05□□□□□ -0.8
XRCC6-208ENST00000478914 RTEL1Q9NZ71 1219 aa10.05□□□□□ -0.8
XRCC6-208ENST00000478914 PCDHA11Q9Y5I1 949 aa10.05□□□□□ -0.8
XRCC6-208ENST00000478914 MICAL3Q7RTP6 2002 aa10.04□□□□□ -0.8
XRCC6-208ENST00000478914 SPDYE3A6NKU9 549 aa10.04□□□□□ -0.8
XRCC6-208ENST00000478914 KIF28PB7ZC32 967 aa10.04□□□□□ -0.8
XRCC6-208ENST00000478914 HAS3O00219 553 aa10.04□□□□□ -0.8
XRCC6-208ENST00000478914 BAIAP3O94812 1187 aa10.04□□□□□ -0.8
XRCC6-208ENST00000478914 HMGB1P09429 215 aaKnown RBP10.04□□□□□ -0.8
XRCC6-208ENST00000478914 HOXD8P13378 290 aaPredicted RBP10.04□□□□□ -0.8
XRCC6-208ENST00000478914 ICAM3P32942 547 aa10.04□□□□□ -0.8
XRCC6-208ENST00000478914 RABGGTBP53611 331 aa10.04□□□□□ -0.8
XRCC6-208ENST00000478914 MRPS9P82933 396 aaKnown RBP10.04□□□□□ -0.8
XRCC6-208ENST00000478914 PPP2R2DQ66LE6 453 aa10.04□□□□□ -0.8
XRCC6-208ENST00000478914 APOA5Q6Q788 366 aa10.04□□□□□ -0.8
XRCC6-208ENST00000478914 TMTC3Q6ZXV5 915 aa10.04□□□□□ -0.8
XRCC6-208ENST00000478914 CYFIP1Q7L576 1253 aa10.04□□□□□ -0.8
XRCC6-208ENST00000478914 DHX32Q7L7V1 743 aaKnown RBP10.04□□□□□ -0.8
XRCC6-208ENST00000478914 HEATR3Q7Z4Q2 680 aa10.04□□□□□ -0.8
XRCC6-208ENST00000478914 SGMS1Q86VZ5 419 aa10.04□□□□□ -0.8
XRCC6-208ENST00000478914 SKAP1Q86WV1 359 aa10.04□□□□□ -0.8
XRCC6-208ENST00000478914 GIMAP8Q8ND71 665 aaPredicted RBP10.04□□□□□ -0.8
XRCC6-208ENST00000478914 GPKOWQ92917 476 aaPredicted RBP eCLIP10.04□□□□□ -0.8
XRCC6-208ENST00000478914 CDHR1Q96JP9 859 aa10.04□□□□□ -0.8
XRCC6-208ENST00000478914 INPP4AQ96PE3 977 aaPredicted RBP10.04□□□□□ -0.8
XRCC6-208ENST00000478914 USP26Q9BXU7 913 aa10.04□□□□□ -0.8
XRCC6-208ENST00000478914 PRDM12Q9H4Q4 367 aa10.04□□□□□ -0.8
XRCC6-208ENST00000478914 ZNF215Q9UL58 517 aaPredicted RBP10.04□□□□□ -0.8
XRCC6-208ENST00000478914 NAP1L2Q9ULW6 460 aaPredicted RBP10.04□□□□□ -0.8
XRCC6-208ENST00000478914 UNC80Q8N2C7 3258 aa10.04□□□□□ -0.8
XRCC6-208ENST00000478914 hCG_1642624A0A1W2PR95 340 aa10.03□□□□□ -0.8
XRCC6-208ENST00000478914 C17orf102A2RUQ5 167 aa10.03□□□□□ -0.8
XRCC6-208ENST00000478914 SPATA31C2B4DYI2 1134 aa10.03□□□□□ -0.8
XRCC6-208ENST00000478914 H3BRB1 525 aa10.03□□□□□ -0.8
XRCC6-208ENST00000478914 MEIS2O14770 477 aa10.03□□□□□ -0.8
XRCC6-208ENST00000478914 ZBTB43O43298 467 aa10.03□□□□□ -0.8
XRCC6-208ENST00000478914 LGALS2P05162 132 aa10.03□□□□□ -0.8
XRCC6-208ENST00000478914 CKBP12277 381 aa10.03□□□□□ -0.8
XRCC6-208ENST00000478914 IGFBP4P22692 258 aa10.03□□□□□ -0.8
XRCC6-208ENST00000478914 SP2Q02086 613 aa10.03□□□□□ -0.8
XRCC6-208ENST00000478914 RBL2Q08999 1139 aa10.03□□□□□ -0.8
XRCC6-208ENST00000478914 RTN1Q16799 776 aa10.03□□□□□ -0.8
XRCC6-208ENST00000478914 CNKSR3Q6P9H4 555 aa10.03□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 17.8 ms