RNA–Protein interactions for RNA: ENST00000478652.1

MCF2L2-210, Transcript of MCF.2 cell line derived transforming sequence-like 2, humanhuman

TSL 3

Gene MCF2L2, Length 574 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCF2L2-210ENST00000478652 FRMPD4Q14CM0 1322 aa25.37■■□□□ 1.65
MCF2L2-210ENST00000478652 SLC27A2O14975 620 aa25.37■■□□□ 1.65
MCF2L2-210ENST00000478652 CCND2P30279 289 aa25.37■■□□□ 1.65
MCF2L2-210ENST00000478652 HIC1Q14526 733 aa25.37■■□□□ 1.65
MCF2L2-210ENST00000478652 KIAA0753Q2KHM9 967 aa25.37■■□□□ 1.65
MCF2L2-210ENST00000478652 CELF3Q5SZQ8 465 aaKnown RBP25.37■■□□□ 1.65
MCF2L2-210ENST00000478652 PPM1EQ8WY54 764 aa25.37■■□□□ 1.65
MCF2L2-210ENST00000478652 WNT8BQ93098 351 aa25.37■■□□□ 1.65
MCF2L2-210ENST00000478652 SPATA33Q96N06 139 aa25.37■■□□□ 1.65
MCF2L2-210ENST00000478652 PCDHA11Q9Y5I1 949 aa25.37■■□□□ 1.65
MCF2L2-210ENST00000478652 VCANP13611 3396 aa25.36■■□□□ 1.65
MCF2L2-210ENST00000478652 SH2B2O14492 632 aaPredicted RBP25.36■■□□□ 1.65
MCF2L2-210ENST00000478652 DDAH1O94760 285 aa25.36■■□□□ 1.65
MCF2L2-210ENST00000478652 PLEKHA8P1O95397 391 aa25.36■■□□□ 1.65
MCF2L2-210ENST00000478652 RXRAP19793 462 aa25.36■■□□□ 1.65
MCF2L2-210ENST00000478652 MRPS9P82933 396 aaKnown RBP25.36■■□□□ 1.65
MCF2L2-210ENST00000478652 PPP2R2DQ66LE6 453 aa25.36■■□□□ 1.65
MCF2L2-210ENST00000478652 RAB11FIP4Q86YS3 637 aa25.36■■□□□ 1.65
MCF2L2-210ENST00000478652 CAGE1Q8TC20 777 aa25.36■■□□□ 1.65
MCF2L2-210ENST00000478652 SPZ1Q9BXG8 430 aa25.36■■□□□ 1.65
MCF2L2-210ENST00000478652 FTOQ9C0B1 505 aaKnown RBP eCLIP25.36■■□□□ 1.65
MCF2L2-210ENST00000478652 PRRC2BQ5JSZ5 2229 aaKnown RBP25.36■■□□□ 1.65
MCF2L2-210ENST00000478652 ACTN1P12814 892 aa25.35■■□□□ 1.65
MCF2L2-210ENST00000478652 ZNF200P98182 395 aaPredicted RBP25.35■■□□□ 1.65
MCF2L2-210ENST00000478652 TRAF1Q13077 416 aa25.35■■□□□ 1.65
MCF2L2-210ENST00000478652 CASC1Q6TDU7 716 aa25.35■■□□□ 1.65
MCF2L2-210ENST00000478652 C7orf31Q8N865 590 aa25.35■■□□□ 1.65
MCF2L2-210ENST00000478652 CTCFLQ8NI51 663 aaPredicted RBP25.35■■□□□ 1.65
MCF2L2-210ENST00000478652 AFAP1L1Q8TED9 768 aa25.35■■□□□ 1.65
MCF2L2-210ENST00000478652 MAP3K14Q99558 947 aa25.35■■□□□ 1.65
MCF2L2-210ENST00000478652 KATNAL1Q9BW62 490 aa25.35■■□□□ 1.65
MCF2L2-210ENST00000478652 RBL2Q08999 1139 aa25.34■■□□□ 1.65
MCF2L2-210ENST00000478652 SEMA3FQ13275 785 aa25.34■■□□□ 1.65
MCF2L2-210ENST00000478652 TCTN1Q2MV58 587 aa25.34■■□□□ 1.65
MCF2L2-210ENST00000478652 CREB3L3Q68CJ9 461 aa25.34■■□□□ 1.65
MCF2L2-210ENST00000478652 KCNV1Q6PIU1 500 aa25.34■■□□□ 1.65
MCF2L2-210ENST00000478652 USP17L6PQ6QN14 398 aa25.34■■□□□ 1.65
MCF2L2-210ENST00000478652 LRRC8DQ7L1W4 858 aa25.34■■□□□ 1.65
MCF2L2-210ENST00000478652 CMTR1Q8N1G2 835 aaKnown RBP25.34■■□□□ 1.65
MCF2L2-210ENST00000478652 CCDC155Q8N6L0 562 aa25.34■■□□□ 1.65
MCF2L2-210ENST00000478652 ARHGEF15O94989 841 aa25.33■■□□□ 1.65
MCF2L2-210ENST00000478652 CA3P07451 260 aa25.33■■□□□ 1.65
MCF2L2-210ENST00000478652 CKBP12277 381 aa25.33■■□□□ 1.65
MCF2L2-210ENST00000478652 SELPP16109 830 aa25.33■■□□□ 1.65
MCF2L2-210ENST00000478652 MCM5P33992 734 aa25.33■■□□□ 1.65
MCF2L2-210ENST00000478652 NECTIN1Q15223 517 aa25.33■■□□□ 1.65
MCF2L2-210ENST00000478652 TRIM71Q2Q1W2 868 aaKnown RBP25.33■■□□□ 1.65
MCF2L2-210ENST00000478652 SRBD1Q8N5C6 995 aaKnown RBP25.33■■□□□ 1.65
MCF2L2-210ENST00000478652 SLC9A7Q96T83 725 aa25.33■■□□□ 1.65
MCF2L2-210ENST00000478652 C16orf70Q9BSU1 422 aa25.33■■□□□ 1.65
MCF2L2-210ENST00000478652 LRRC2Q9BYS8 371 aa25.33■■□□□ 1.65
MCF2L2-210ENST00000478652 SIP14410 1827 aa25.33■■□□□ 1.64
MCF2L2-210ENST00000478652 NBNO60934 754 aa25.32■■□□□ 1.64
MCF2L2-210ENST00000478652 PPFIA4O75335 1185 aa25.32■■□□□ 1.64
MCF2L2-210ENST00000478652 TGFB3P10600 412 aa25.32■■□□□ 1.64
MCF2L2-210ENST00000478652 IGFBP4P22692 258 aa25.32■■□□□ 1.64
MCF2L2-210ENST00000478652 KIF5BP33176 963 aa25.32■■□□□ 1.64
MCF2L2-210ENST00000478652 TRAF7Q6Q0C0 670 aa25.32■■□□□ 1.64
MCF2L2-210ENST00000478652 NFXL1Q6ZNB6 911 aa25.32■■□□□ 1.64
MCF2L2-210ENST00000478652 RRP36Q96EU6 259 aaKnown RBP25.32■■□□□ 1.64
MCF2L2-210ENST00000478652 TMEM87BQ96K49 555 aa25.32■■□□□ 1.64
MCF2L2-210ENST00000478652 INPP4AQ96PE3 977 aaPredicted RBP25.32■■□□□ 1.64
MCF2L2-210ENST00000478652 MTA3Q9BTC8 594 aa25.32■■□□□ 1.64
MCF2L2-210ENST00000478652 RTEL1Q9NZ71 1219 aa25.32■■□□□ 1.64
MCF2L2-210ENST00000478652 TELO2Q9Y4R8 837 aa25.32■■□□□ 1.64
MCF2L2-210ENST00000478652 REV3LO60673 3130 aa25.31■■□□□ 1.64
MCF2L2-210ENST00000478652 MEIS2O14770 477 aa25.31■■□□□ 1.64
MCF2L2-210ENST00000478652 CCDC85BQ15834 202 aaPredicted RBP25.31■■□□□ 1.64
MCF2L2-210ENST00000478652 MLXIPQ9HAP2 919 aa25.31■■□□□ 1.64
MCF2L2-210ENST00000478652 ANO2Q9NQ90 1003 aa25.31■■□□□ 1.64
MCF2L2-210ENST00000478652 TTC28Q96AY4 2481 aa25.31■■□□□ 1.64
MCF2L2-210ENST00000478652 hCG_1642624A0A1W2PR95 340 aa25.3■■□□□ 1.64
MCF2L2-210ENST00000478652 CCDC69A6NI79 296 aa25.3■■□□□ 1.64
MCF2L2-210ENST00000478652 ICAM3P32942 547 aa25.3■■□□□ 1.64
MCF2L2-210ENST00000478652 PTK7Q13308 1070 aa25.3■■□□□ 1.64
MCF2L2-210ENST00000478652 TMCO2Q7Z6W1 182 aaPredicted RBP25.3■■□□□ 1.64
MCF2L2-210ENST00000478652 HERC6Q8IVU3 1022 aa25.3■■□□□ 1.64
MCF2L2-210ENST00000478652 SMARCC2Q8TAQ2 1214 aa25.3■■□□□ 1.64
MCF2L2-210ENST00000478652 CERS4Q9HA82 394 aa25.3■■□□□ 1.64
MCF2L2-210ENST00000478652 TCF20Q9UGU0 1960 aaKnown RBP25.3■■□□□ 1.64
MCF2L2-210ENST00000478652 TRANK1O15050 2925 aa25.3■■□□□ 1.64
MCF2L2-210ENST00000478652 EPOPA6NHQ4 379 aa25.29■■□□□ 1.64
MCF2L2-210ENST00000478652 RFXAPO00287 272 aa25.29■■□□□ 1.64
MCF2L2-210ENST00000478652 BAIAP3O94812 1187 aa25.29■■□□□ 1.64
MCF2L2-210ENST00000478652 CXCL10P02778 98 aa25.29■■□□□ 1.64
MCF2L2-210ENST00000478652 LGALS2P05162 132 aa25.29■■□□□ 1.64
MCF2L2-210ENST00000478652 SMARCA1P28370 1054 aa25.29■■□□□ 1.64
MCF2L2-210ENST00000478652 WDR5P61964 334 aaKnown RBP25.29■■□□□ 1.64
MCF2L2-210ENST00000478652 MBTPS1Q14703 1052 aa25.29■■□□□ 1.64
MCF2L2-210ENST00000478652 ZNF618Q5T7W0 954 aa25.29■■□□□ 1.64
MCF2L2-210ENST00000478652 SPRED2Q7Z698 418 aa25.29■■□□□ 1.64
MCF2L2-210ENST00000478652 PHOSPHO2Q8TCD6 241 aa25.29■■□□□ 1.64
MCF2L2-210ENST00000478652 SEC63Q9UGP8 760 aaKnown RBP25.29■■□□□ 1.64
MCF2L2-210ENST00000478652 SPTBN5Q9NRC6 3674 aaKnown RBP25.28■■□□□ 1.64
MCF2L2-210ENST00000478652 SPATA31C2B4DYI2 1134 aa25.28■■□□□ 1.64
MCF2L2-210ENST00000478652 LIFRP42702 1097 aa25.28■■□□□ 1.64
MCF2L2-210ENST00000478652 DEFB103AP81534 67 aa25.28■■□□□ 1.64
MCF2L2-210ENST00000478652 GNPTABQ3T906 1256 aa25.28■■□□□ 1.64
MCF2L2-210ENST00000478652 BMP2KLQ5H9B9 411 aa25.28■■□□□ 1.64
MCF2L2-210ENST00000478652 CYFIP1Q7L576 1253 aa25.28■■□□□ 1.64
Retrieved 100 of 20,778 RNA–protein pairs in 48.8 ms