RNA–Protein interactions for RNA: ENST00000477538.1

VHL-203, Transcript of von Hippel-Lindau tumor suppressor, humanhuman

TSL 1 (best)

Gene VHL, Length 958 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VHL-203ENST00000477538 BMP15O95972 392 aa18.34■□□□□ 0.53
VHL-203ENST00000477538 ARP10275 920 aa18.34■□□□□ 0.53
VHL-203ENST00000477538 ELNP15502 786 aa18.34■□□□□ 0.53
VHL-203ENST00000477538 NASPP49321 788 aaPredicted RBP18.34■□□□□ 0.53
VHL-203ENST00000477538 PTGDRQ13258 359 aa18.34■□□□□ 0.53
VHL-203ENST00000477538 PXYLP1Q8TE99 480 aa18.34■□□□□ 0.53
VHL-203ENST00000477538 CDHR1Q96JP9 859 aa18.34■□□□□ 0.53
VHL-203ENST00000477538 KATNBL1Q9H079 304 aa18.34■□□□□ 0.53
VHL-203ENST00000477538 KCNH7Q9NS40 1196 aa18.34■□□□□ 0.53
VHL-203ENST00000477538 PTCH2Q9Y6C5 1203 aa18.34■□□□□ 0.53
VHL-203ENST00000477538 FIBPO43427 364 aa18.33■□□□□ 0.52
VHL-203ENST00000477538 HMGCRP04035 888 aa18.33■□□□□ 0.52
VHL-203ENST00000477538 ICAM3P32942 547 aa18.33■□□□□ 0.52
VHL-203ENST00000477538 SEMA3FQ13275 785 aa18.33■□□□□ 0.52
VHL-203ENST00000477538 ACVR2BQ13705 512 aa18.33■□□□□ 0.52
VHL-203ENST00000477538 STK38Q15208 465 aa18.33■□□□□ 0.52
VHL-203ENST00000477538 PTPAQ15257 358 aa18.33■□□□□ 0.52
VHL-203ENST00000477538 CALCRLQ16602 461 aa18.33■□□□□ 0.52
VHL-203ENST00000477538 CTU1Q7Z7A3 348 aaKnown RBP18.33■□□□□ 0.52
VHL-203ENST00000477538 SLAIN1Q8ND83 568 aa18.33■□□□□ 0.52
VHL-203ENST00000477538 TMEM60Q9H2L4 133 aa18.33■□□□□ 0.52
VHL-203ENST00000477538 ZHX1Q9UKY1 873 aaPredicted RBP18.33■□□□□ 0.52
VHL-203ENST00000477538 PTPN22Q9Y2R2 807 aa18.33■□□□□ 0.52
VHL-203ENST00000477538 MRVI1Q9Y6F6 885 aa18.33■□□□□ 0.52
VHL-203ENST00000477538 SPATA31C2B4DYI2 1134 aa18.32■□□□□ 0.52
VHL-203ENST00000477538 LAD1O00515 517 aa18.32■□□□□ 0.52
VHL-203ENST00000477538 TBX3O15119 743 aa18.32■□□□□ 0.52
VHL-203ENST00000477538 MSH4O15457 936 aa18.32■□□□□ 0.52
VHL-203ENST00000477538 MAFGO15525 162 aa18.32■□□□□ 0.52
VHL-203ENST00000477538 MARCH6O60337 910 aa18.32■□□□□ 0.52
VHL-203ENST00000477538 YEATS4O95619 227 aa18.32■□□□□ 0.52
VHL-203ENST00000477538 OR52Z1P0C646 297 aa18.32■□□□□ 0.52
VHL-203ENST00000477538 ATP2C1P98194 919 aaPredicted RBP18.32■□□□□ 0.52
VHL-203ENST00000477538 PRAMEF19Q5SWL8 479 aa18.32■□□□□ 0.52
VHL-203ENST00000477538 TAPT1Q6NXT6 567 aa18.32■□□□□ 0.52
VHL-203ENST00000477538 C4orf32Q8N8J7 132 aa18.32■□□□□ 0.52
VHL-203ENST00000477538 LINC00301Q8NCQ3 95 aa18.32■□□□□ 0.52
VHL-203ENST00000477538 ETNPPLQ8TBG4 499 aa18.32■□□□□ 0.52
VHL-203ENST00000477538 SCFD2Q8WU76 684 aa18.32■□□□□ 0.52
VHL-203ENST00000477538 UIMC1Q96RL1 719 aa18.32■□□□□ 0.52
VHL-203ENST00000477538 AGO4Q9HCK5 861 aaKnown RBP18.32■□□□□ 0.52
VHL-203ENST00000477538 KCNMB3Q9NPA1 279 aa18.32■□□□□ 0.52
VHL-203ENST00000477538 PDGFCQ9NRA1 345 aa18.32■□□□□ 0.52
VHL-203ENST00000477538 NRBP1Q9UHY1 535 aa18.32■□□□□ 0.52
VHL-203ENST00000477538 LOXHD1Q8IVV2 1947 aa18.31■□□□□ 0.52
VHL-203ENST00000477538 RBM47A0AV96 593 aaKnown RBP18.31■□□□□ 0.52
VHL-203ENST00000477538 BAG4O95429 457 aaKnown RBP18.31■□□□□ 0.52
VHL-203ENST00000477538 GRK4P32298 578 aa18.31■□□□□ 0.52
VHL-203ENST00000477538 TRIM32Q13049 653 aa18.31■□□□□ 0.52
VHL-203ENST00000477538 TTLL4Q14679 1199 aa18.31■□□□□ 0.52
VHL-203ENST00000477538 SLC39A14Q15043 492 aa18.31■□□□□ 0.52
VHL-203ENST00000477538 KCNV1Q6PIU1 500 aa18.31■□□□□ 0.52
VHL-203ENST00000477538 SLFN12Q8IYM2 578 aa18.31■□□□□ 0.52
VHL-203ENST00000477538 HAS1Q92839 578 aa18.31■□□□□ 0.52
VHL-203ENST00000477538 SPATA32Q96LK8 384 aa18.31■□□□□ 0.52
VHL-203ENST00000477538 MTMR9Q96QG7 549 aa18.31■□□□□ 0.52
VHL-203ENST00000477538 ZNF577Q9BSK1 485 aa18.31■□□□□ 0.52
VHL-203ENST00000477538 PKD2L1Q9P0L9 805 aa18.31■□□□□ 0.52
VHL-203ENST00000477538 KAT6AQ92794 2004 aa18.3■□□□□ 0.52
VHL-203ENST00000477538 IPO5O00410 1097 aaKnown RBP18.3■□□□□ 0.52
VHL-203ENST00000477538 SPTLC2O15270 562 aa18.3■□□□□ 0.52
VHL-203ENST00000477538 ZNF865P0CJ78 1059 aaPredicted RBP18.3■□□□□ 0.52
VHL-203ENST00000477538 TGFB3P10600 412 aa18.3■□□□□ 0.52
VHL-203ENST00000477538 CYBAP13498 195 aa18.3■□□□□ 0.52
VHL-203ENST00000477538 CACNB2Q08289 660 aaPredicted RBP18.3■□□□□ 0.52
VHL-203ENST00000477538 SLC5A5Q92911 643 aa18.3■□□□□ 0.52
VHL-203ENST00000477538 GJA10Q969M2 543 aa18.3■□□□□ 0.52
VHL-203ENST00000477538 FAM20AQ96MK3 541 aa18.3■□□□□ 0.52
VHL-203ENST00000477538 SCAND2PQ9GZW5 306 aaPredicted RBP18.3■□□□□ 0.52
VHL-203ENST00000477538 ATP9AO75110 1047 aa18.29■□□□□ 0.52
VHL-203ENST00000477538 ARIH2O95376 493 aa18.29■□□□□ 0.52
VHL-203ENST00000477538 TXNP10599 105 aaKnown RBP18.29■□□□□ 0.52
VHL-203ENST00000477538 PRKAR2AP13861 404 aaKnown RBP18.29■□□□□ 0.52
VHL-203ENST00000477538 KCNA2P16389 499 aa18.29■□□□□ 0.52
VHL-203ENST00000477538 UBA1P22314 1058 aaKnown RBP18.29■□□□□ 0.52
VHL-203ENST00000477538 MARCKSP29966 332 aaPredicted RBP18.29■□□□□ 0.52
VHL-203ENST00000477538 PRPHP41219 470 aa18.29■□□□□ 0.52
VHL-203ENST00000477538 ADCYAP1R1P41586 468 aa18.29■□□□□ 0.52
VHL-203ENST00000477538 ITGB3BPQ13352 177 aaPredicted RBP18.29■□□□□ 0.52
VHL-203ENST00000477538 LY6KQ17RY6 165 aa18.29■□□□□ 0.52
VHL-203ENST00000477538 CCDC144BQ3MJ40 725 aa18.29■□□□□ 0.52
VHL-203ENST00000477538 LRCH2Q5VUJ6 765 aa18.29■□□□□ 0.52
VHL-203ENST00000477538 ARL6IP4Q66PJ3 421 aaKnown RBP18.29■□□□□ 0.52
VHL-203ENST00000477538 CCDC62Q6P9F0 684 aa18.29■□□□□ 0.52
VHL-203ENST00000477538 TRPV1Q8NER1 839 aa18.29■□□□□ 0.52
VHL-203ENST00000477538 KCNG4Q8TDN1 519 aa18.29■□□□□ 0.52
VHL-203ENST00000477538 LEO1Q8WVC0 666 aaPredicted RBP18.29■□□□□ 0.52
VHL-203ENST00000477538 SENP7Q9BQF6 1050 aa18.29■□□□□ 0.52
VHL-203ENST00000477538 GDPD2Q9HCC8 539 aa18.29■□□□□ 0.52
VHL-203ENST00000477538 DDX41Q9UJV9 622 aaKnown RBP18.29■□□□□ 0.52
VHL-203ENST00000477538 RCOR1Q9UKL0 485 aa18.29■□□□□ 0.52
VHL-203ENST00000477538 MORC2Q9Y6X9 1032 aaPredicted RBP18.29■□□□□ 0.52
VHL-203ENST00000477538 NFASCO94856 1347 aa18.28■□□□□ 0.52
VHL-203ENST00000477538 C11orf97A0A1B0GVM6 126 aaPredicted RBP18.28■□□□□ 0.52
VHL-203ENST00000477538 GAS7O60861 476 aa18.28■□□□□ 0.52
VHL-203ENST00000477538 INHAP05111 366 aa18.28■□□□□ 0.52
VHL-203ENST00000477538 TXKP42681 527 aa18.28■□□□□ 0.52
VHL-203ENST00000477538 SP2Q02086 613 aa18.28■□□□□ 0.52
VHL-203ENST00000477538 IQSEC1Q6DN90 963 aa18.28■□□□□ 0.52
VHL-203ENST00000477538 CLEC17AQ6ZS10 378 aa18.28■□□□□ 0.52
Retrieved 100 of 20,778 RNA–protein pairs in 24.4 ms