RNA–Protein interactions for RNA: ENST00000476961.5

CNTNAP3B-205, Transcript of contactin associated protein like 3B, humanhuman

TSL 1 (best)

Gene CNTNAP3B, Length 2,643 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNTNAP3B-205ENST00000476961 TTC14Q96N46 770 aa9.12□□□□□ -0.95
CNTNAP3B-205ENST00000476961 IFT122Q9HBG6 1241 aa9.12□□□□□ -0.95
CNTNAP3B-205ENST00000476961 STAP2Q9UGK3 403 aa9.12□□□□□ -0.95
CNTNAP3B-205ENST00000476961 CNPY2Q9Y2B0 182 aa9.12□□□□□ -0.95
CNTNAP3B-205ENST00000476961 DAAM1Q9Y4D1 1078 aa9.12□□□□□ -0.95
CNTNAP3B-205ENST00000476961 WDR33Q9C0J8 1336 aaKnown RBP9.11□□□□□ -0.95
CNTNAP3B-205ENST00000476961 TTC34A8MYJ7 566 aa9.11□□□□□ -0.95
CNTNAP3B-205ENST00000476961 ACTN4O43707 911 aaKnown RBP9.11□□□□□ -0.95
CNTNAP3B-205ENST00000476961 PDE8AO60658 829 aa9.11□□□□□ -0.95
CNTNAP3B-205ENST00000476961 ZPR1O75312 459 aa9.11□□□□□ -0.95
CNTNAP3B-205ENST00000476961 HNRNPCP07910 306 aaKnown RBP eCLIP9.11□□□□□ -0.95
CNTNAP3B-205ENST00000476961 GNAT2P19087 354 aa9.11□□□□□ -0.95
CNTNAP3B-205ENST00000476961 CTSWP56202 376 aa9.11□□□□□ -0.95
CNTNAP3B-205ENST00000476961 GEMIN4P57678 1058 aaKnown RBP9.11□□□□□ -0.95
CNTNAP3B-205ENST00000476961 RIPK1Q13546 671 aa9.11□□□□□ -0.95
CNTNAP3B-205ENST00000476961 CUL4AQ13619 759 aa9.11□□□□□ -0.95
CNTNAP3B-205ENST00000476961 SUZ12Q15022 739 aaKnown RBP9.11□□□□□ -0.95
CNTNAP3B-205ENST00000476961 MAP3K11Q16584 847 aa9.11□□□□□ -0.95
CNTNAP3B-205ENST00000476961 C4orf46Q504U0 113 aa9.11□□□□□ -0.95
CNTNAP3B-205ENST00000476961 SLC44A4Q53GD3 710 aa9.11□□□□□ -0.95
CNTNAP3B-205ENST00000476961 ATG9AQ7Z3C6 839 aa9.11□□□□□ -0.95
CNTNAP3B-205ENST00000476961 CABP7Q86V35 215 aa9.11□□□□□ -0.95
CNTNAP3B-205ENST00000476961 SESTD1Q86VW0 696 aa9.11□□□□□ -0.95
CNTNAP3B-205ENST00000476961 OSTM1Q86WC4 334 aa9.11□□□□□ -0.95
CNTNAP3B-205ENST00000476961 TRAPPC9Q96Q05 1148 aa9.11□□□□□ -0.95
CNTNAP3B-205ENST00000476961 CGREF1Q99674 301 aa9.11□□□□□ -0.95
CNTNAP3B-205ENST00000476961 FAM167BQ9BTA0 163 aa9.11□□□□□ -0.95
CNTNAP3B-205ENST00000476961 ATAD3AQ9NVI7 634 aa9.11□□□□□ -0.95
CNTNAP3B-205ENST00000476961 ZNF148Q9UQR1 794 aa9.11□□□□□ -0.95
CNTNAP3B-205ENST00000476961 USP42Q9H9J4 1324 aaKnown RBP9.11□□□□□ -0.95
CNTNAP3B-205ENST00000476961 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP9.11□□□□□ -0.95
CNTNAP3B-205ENST00000476961 PDE6CP51160 858 aa9.11□□□□□ -0.95
CNTNAP3B-205ENST00000476961 MRPS35P82673 323 aaKnown RBP9.11□□□□□ -0.95
CNTNAP3B-205ENST00000476961 TRIM29Q14134 588 aa9.11□□□□□ -0.95
CNTNAP3B-205ENST00000476961 SAFBQ15424 915 aaKnown RBP eCLIP9.11□□□□□ -0.95
CNTNAP3B-205ENST00000476961 P3H1Q32P28 736 aa9.11□□□□□ -0.95
CNTNAP3B-205ENST00000476961 SRGAP1Q7Z6B7 1085 aa9.11□□□□□ -0.95
CNTNAP3B-205ENST00000476961 SUN5Q8TC36 379 aa9.11□□□□□ -0.95
CNTNAP3B-205ENST00000476961 KIFAP3Q92845 792 aa9.11□□□□□ -0.95
CNTNAP3B-205ENST00000476961 EAF2Q96CJ1 260 aaPredicted RBP9.11□□□□□ -0.95
CNTNAP3B-205ENST00000476961 INTS4Q96HW7 963 aaKnown RBP9.11□□□□□ -0.95
CNTNAP3B-205ENST00000476961 SENP7Q9BQF6 1050 aa9.11□□□□□ -0.95
CNTNAP3B-205ENST00000476961 GREM2Q9H772 168 aa9.11□□□□□ -0.95
CNTNAP3B-205ENST00000476961 CDKN2AIPQ9NXV6 580 aaPredicted RBP9.11□□□□□ -0.95
CNTNAP3B-205ENST00000476961 DIAPH2O60879 1101 aa9.1□□□□□ -0.95
CNTNAP3B-205ENST00000476961 POTEIP0CG38 1075 aa9.1□□□□□ -0.95
CNTNAP3B-205ENST00000476961 ADRA2BP18089 450 aa9.1□□□□□ -0.95
CNTNAP3B-205ENST00000476961 RFC4P35249 363 aa9.1□□□□□ -0.95
CNTNAP3B-205ENST00000476961 CCT6AP40227 531 aaKnown RBP9.1□□□□□ -0.95
CNTNAP3B-205ENST00000476961 TUBP50607 506 aa9.1□□□□□ -0.95
CNTNAP3B-205ENST00000476961 ELF3P78545 371 aaPredicted RBP9.1□□□□□ -0.95
CNTNAP3B-205ENST00000476961 TFCP2Q12800 502 aa9.1□□□□□ -0.95
CNTNAP3B-205ENST00000476961 GPR162Q16538 588 aa9.1□□□□□ -0.95
CNTNAP3B-205ENST00000476961 LRRC24Q50LG9 513 aa9.1□□□□□ -0.95
CNTNAP3B-205ENST00000476961 TCERG1LQ5VWI1 586 aa9.1□□□□□ -0.95
CNTNAP3B-205ENST00000476961 GRAMD2AQ8IUY3 354 aa9.1□□□□□ -0.95
CNTNAP3B-205ENST00000476961 SH3TC2Q8TF17 1288 aa9.1□□□□□ -0.95
CNTNAP3B-205ENST00000476961 NEUROD6Q96NK8 337 aa9.1□□□□□ -0.95
CNTNAP3B-205ENST00000476961 IP6K2Q9UHH9 426 aa9.1□□□□□ -0.95
CNTNAP3B-205ENST00000476961 BAIAP2L1Q9UHR4 511 aa9.1□□□□□ -0.95
CNTNAP3B-205ENST00000476961 C4AP0C0L4 1744 aa9.1□□□□□ -0.95
CNTNAP3B-205ENST00000476961 POTEFA5A3E0 1075 aa9.1□□□□□ -0.95
CNTNAP3B-205ENST00000476961 EYA2O00167 538 aa9.1□□□□□ -0.95
CNTNAP3B-205ENST00000476961 WDR46O15213 610 aaKnown RBP9.1□□□□□ -0.95
CNTNAP3B-205ENST00000476961 TEX28O15482 410 aa9.1□□□□□ -0.95
CNTNAP3B-205ENST00000476961 PARNO95453 639 aaKnown RBP9.1□□□□□ -0.95
CNTNAP3B-205ENST00000476961 SDSP20132 328 aa9.1□□□□□ -0.95
CNTNAP3B-205ENST00000476961 KIF5BP33176 963 aa9.1□□□□□ -0.95
CNTNAP3B-205ENST00000476961 SLC16A2P36021 539 aa9.1□□□□□ -0.95
CNTNAP3B-205ENST00000476961 MTTPP55157 894 aa9.1□□□□□ -0.95
CNTNAP3B-205ENST00000476961 WTAPQ15007 396 aa9.1□□□□□ -0.95
CNTNAP3B-205ENST00000476961 ME3Q16798 604 aa9.1□□□□□ -0.95
CNTNAP3B-205ENST00000476961 BOLA3Q53S33 107 aa9.1□□□□□ -0.95
CNTNAP3B-205ENST00000476961 FKBP15Q5T1M5 1219 aa9.1□□□□□ -0.95
CNTNAP3B-205ENST00000476961 RAB11FIP4Q86YS3 637 aa9.1□□□□□ -0.95
CNTNAP3B-205ENST00000476961 WDR60Q8WVS4 1066 aa9.1□□□□□ -0.95
CNTNAP3B-205ENST00000476961 IFT43Q96FT9 208 aa9.1□□□□□ -0.95
CNTNAP3B-205ENST00000476961 CDK5RAP3Q96JB5 506 aa9.1□□□□□ -0.95
CNTNAP3B-205ENST00000476961 MAFFQ9ULX9 164 aa9.1□□□□□ -0.95
CNTNAP3B-205ENST00000476961 UBR3Q6ZT12 1888 aa9.1□□□□□ -0.95
CNTNAP3B-205ENST00000476961 TNS1Q9HBL0 1735 aaKnown RBP9.09□□□□□ -0.95
CNTNAP3B-205ENST00000476961 CCDC194A0A1B0GVG4 234 aa9.09□□□□□ -0.95
CNTNAP3B-205ENST00000476961 USO1O60763 962 aaKnown RBP9.09□□□□□ -0.95
CNTNAP3B-205ENST00000476961 TUBBP07437 444 aa9.09□□□□□ -0.95
CNTNAP3B-205ENST00000476961 ITGA6P23229 1130 aa9.09□□□□□ -0.95
CNTNAP3B-205ENST00000476961 S100A5P33763 92 aa9.09□□□□□ -0.95
CNTNAP3B-205ENST00000476961 HSPA4P34932 840 aa9.09□□□□□ -0.95
CNTNAP3B-205ENST00000476961 ZNF165P49910 485 aa9.09□□□□□ -0.95
CNTNAP3B-205ENST00000476961 CHMP4BP1P59074 171 aa9.09□□□□□ -0.95
CNTNAP3B-205ENST00000476961 VSNL1P62760 191 aa9.09□□□□□ -0.95
CNTNAP3B-205ENST00000476961 KIF5AQ12840 1032 aa9.09□□□□□ -0.95
CNTNAP3B-205ENST00000476961 MSLNQ13421 630 aaPredicted RBP9.09□□□□□ -0.95
CNTNAP3B-205ENST00000476961 NAA35Q5VZE5 725 aa9.09□□□□□ -0.95
CNTNAP3B-205ENST00000476961 ATL3Q6DD88 541 aa9.09□□□□□ -0.95
CNTNAP3B-205ENST00000476961 DUS1LQ6P1R4 473 aaKnown RBP9.09□□□□□ -0.95
CNTNAP3B-205ENST00000476961 AACSQ86V21 672 aa9.09□□□□□ -0.95
CNTNAP3B-205ENST00000476961 LILRB2Q8N423 598 aa9.09□□□□□ -0.95
CNTNAP3B-205ENST00000476961 PDILTQ8N807 584 aa9.09□□□□□ -0.95
CNTNAP3B-205ENST00000476961 PI4K2BQ8TCG2 481 aa9.09□□□□□ -0.95
CNTNAP3B-205ENST00000476961 PPIL4Q8WUA2 492 aaKnown RBP eCLIP9.09□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 27.7 ms