RNA–Protein interactions for RNA: ENST00000476792.1

LIMK1-204, Transcript of LIM domain kinase 1, humanhuman

TSL 2

Gene LIMK1, Length 785 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMK1-204ENST00000476792 BCAS3Q9H6U6 928 aa24.6■■□□□ 1.53
LIMK1-204ENST00000476792 SNX14Q9Y5W7 946 aa24.6■■□□□ 1.53
LIMK1-204ENST00000476792 FRMPD4Q14CM0 1322 aa24.6■■□□□ 1.53
LIMK1-204ENST00000476792 GRXCR1A8MXD5 290 aa24.59■■□□□ 1.53
LIMK1-204ENST00000476792 PIK3CDO00329 1044 aa24.59■■□□□ 1.53
LIMK1-204ENST00000476792 TGFB3P10600 412 aa24.59■■□□□ 1.53
LIMK1-204ENST00000476792 HSDL1Q3SXM5 330 aa24.59■■□□□ 1.53
LIMK1-204ENST00000476792 OTOP2Q7RTS6 562 aa24.59■■□□□ 1.53
LIMK1-204ENST00000476792 DEFB128Q7Z7B8 93 aa24.59■■□□□ 1.53
LIMK1-204ENST00000476792 CNTNAP5Q8WYK1 1306 aa24.59■■□□□ 1.53
LIMK1-204ENST00000476792 REC8O95072 547 aa24.58■■□□□ 1.53
LIMK1-204ENST00000476792 MFSD10Q14728 455 aa24.58■■□□□ 1.53
LIMK1-204ENST00000476792 GDF6Q6KF10 455 aaPredicted RBP24.58■■□□□ 1.53
LIMK1-204ENST00000476792 Q6ZUG5 572 aa24.58■■□□□ 1.53
LIMK1-204ENST00000476792 RPUSD2Q8IZ73 545 aaKnown RBP24.58■■□□□ 1.53
LIMK1-204ENST00000476792 C7orf31Q8N865 590 aa24.58■■□□□ 1.53
LIMK1-204ENST00000476792 RETREG2Q8NC44 543 aa24.58■■□□□ 1.53
LIMK1-204ENST00000476792 KCNB2Q92953 911 aa24.58■■□□□ 1.53
LIMK1-204ENST00000476792 GUCD1Q96NT3 240 aa24.58■■□□□ 1.53
LIMK1-204ENST00000476792 SEMA6BQ9H3T3 888 aa24.58■■□□□ 1.53
LIMK1-204ENST00000476792 HDAC6Q9UBN7 1215 aa24.58■■□□□ 1.53
LIMK1-204ENST00000476792 V9GY48 417 aaPredicted RBP24.58■■□□□ 1.53
LIMK1-204ENST00000476792 STAM2O75886 525 aa24.57■■□□□ 1.52
LIMK1-204ENST00000476792 APOBRQ0VD83 1088 aa24.57■■□□□ 1.52
LIMK1-204ENST00000476792 KIAA0753Q2KHM9 967 aa24.57■■□□□ 1.52
LIMK1-204ENST00000476792 PCNX4Q63HM2 1172 aa24.57■■□□□ 1.52
LIMK1-204ENST00000476792 WWC2Q6AWC2 1192 aa24.57■■□□□ 1.52
LIMK1-204ENST00000476792 BLOC1S2Q6QNY1 142 aa24.57■■□□□ 1.52
LIMK1-204ENST00000476792 HERVK_113Q902F9 699 aa24.57■■□□□ 1.52
LIMK1-204ENST00000476792 INPP4AQ96PE3 977 aaPredicted RBP24.57■■□□□ 1.52
LIMK1-204ENST00000476792 KATNAL1Q9BW62 490 aa24.57■■□□□ 1.52
LIMK1-204ENST00000476792 TTYH1Q9H313 450 aaPredicted RBP24.57■■□□□ 1.52
LIMK1-204ENST00000476792 CXXC1Q9P0U4 656 aaPredicted RBP24.57■■□□□ 1.52
LIMK1-204ENST00000476792 STXBP5LQ9Y2K9 1186 aa24.57■■□□□ 1.52
LIMK1-204ENST00000476792 SPATA31C2B4DYI2 1134 aa24.56■■□□□ 1.52
LIMK1-204ENST00000476792 FIBPO43427 364 aa24.56■■□□□ 1.52
LIMK1-204ENST00000476792 PPFIA4O75335 1185 aa24.56■■□□□ 1.52
LIMK1-204ENST00000476792 SEMA3FQ13275 785 aa24.56■■□□□ 1.52
LIMK1-204ENST00000476792 RASIP1Q5U651 963 aa24.56■■□□□ 1.52
LIMK1-204ENST00000476792 CYFIP1Q7L576 1253 aa24.56■■□□□ 1.52
LIMK1-204ENST00000476792 BRF1Q92994 677 aa24.56■■□□□ 1.52
LIMK1-204ENST00000476792 MTIF3Q9H2K0 278 aaKnown RBP24.56■■□□□ 1.52
LIMK1-204ENST00000476792 SPDYE3A6NKU9 549 aa24.55■■□□□ 1.52
LIMK1-204ENST00000476792 NOP56O00567 594 aaKnown RBP24.55■■□□□ 1.52
LIMK1-204ENST00000476792 F2P00734 622 aa24.55■■□□□ 1.52
LIMK1-204ENST00000476792 DNAJB2P25686 324 aa24.55■■□□□ 1.52
LIMK1-204ENST00000476792 CDC27P30260 824 aa24.55■■□□□ 1.52
LIMK1-204ENST00000476792 ICAM3P32942 547 aa24.55■■□□□ 1.52
LIMK1-204ENST00000476792 NAPAP54920 295 aa24.55■■□□□ 1.52
LIMK1-204ENST00000476792 SP4Q02446 784 aa24.55■■□□□ 1.52
LIMK1-204ENST00000476792 BFSP2Q13515 415 aa24.55■■□□□ 1.52
LIMK1-204ENST00000476792 SESTD1Q86VW0 696 aa24.55■■□□□ 1.52
LIMK1-204ENST00000476792 FAM217BQ9NTX9 383 aaPredicted RBP24.55■■□□□ 1.52
LIMK1-204ENST00000476792 ZBBXA8MT70 800 aa24.54■■□□□ 1.52
LIMK1-204ENST00000476792 IQCF3P0C7M6 154 aa24.54■■□□□ 1.52
LIMK1-204ENST00000476792 HOXD8P13378 290 aaPredicted RBP24.54■■□□□ 1.52
LIMK1-204ENST00000476792 PBX2P40425 430 aa24.54■■□□□ 1.52
LIMK1-204ENST00000476792 METAP2P50579 478 aaKnown RBP eCLIP24.54■■□□□ 1.52
LIMK1-204ENST00000476792 FUT2Q10981 343 aa24.54■■□□□ 1.52
LIMK1-204ENST00000476792 NEDD9Q14511 834 aa24.54■■□□□ 1.52
LIMK1-204ENST00000476792 XRRA1Q6P2D8 792 aa24.54■■□□□ 1.52
LIMK1-204ENST00000476792 NLRX1Q86UT6 975 aa24.54■■□□□ 1.52
LIMK1-204ENST00000476792 VWCEQ96DN2 955 aa24.54■■□□□ 1.52
LIMK1-204ENST00000476792 CDX2Q99626 313 aaPredicted RBP24.54■■□□□ 1.52
LIMK1-204ENST00000476792 PPP4R2Q9NY27 417 aa24.54■■□□□ 1.52
LIMK1-204ENST00000476792 GTF2IRD1Q9UHL9 959 aa24.54■■□□□ 1.52
LIMK1-204ENST00000476792 PCDHA6Q9UN73 950 aa24.54■■□□□ 1.52
LIMK1-204ENST00000476792 PCDHA8Q9Y5H6 950 aa24.54■■□□□ 1.52
LIMK1-204ENST00000476792 SCN5AQ14524 2016 aa24.54■■□□□ 1.52
LIMK1-204ENST00000476792 TRIP12Q14669 1992 aaPredicted RBP24.53■■□□□ 1.52
LIMK1-204ENST00000476792 HAS3O00219 553 aa24.53■■□□□ 1.52
LIMK1-204ENST00000476792 ADD1P35611 737 aaKnown RBP24.53■■□□□ 1.52
LIMK1-204ENST00000476792 ZNF200P98182 395 aaPredicted RBP24.53■■□□□ 1.52
LIMK1-204ENST00000476792 TYW1BQ6NUM6 668 aa24.53■■□□□ 1.52
LIMK1-204ENST00000476792 METTL7BQ6UX53 244 aa24.53■■□□□ 1.52
LIMK1-204ENST00000476792 CTAGE1Q96RT6 745 aa24.53■■□□□ 1.52
LIMK1-204ENST00000476792 C16orf70Q9BSU1 422 aa24.53■■□□□ 1.52
LIMK1-204ENST00000476792 FTOQ9C0B1 505 aaKnown RBP eCLIP24.53■■□□□ 1.52
LIMK1-204ENST00000476792 PKD2L1Q9P0L9 805 aa24.53■■□□□ 1.52
LIMK1-204ENST00000476792 TELO2Q9Y4R8 837 aa24.53■■□□□ 1.52
LIMK1-204ENST00000476792 DOCK5Q9H7D0 1870 aa24.52■■□□□ 1.52
LIMK1-204ENST00000476792 PITPNM1O00562 1244 aa24.52■■□□□ 1.52
LIMK1-204ENST00000476792 RPS6KB1P23443 525 aa24.52■■□□□ 1.52
LIMK1-204ENST00000476792 PSMA5P28066 241 aa24.52■■□□□ 1.52
LIMK1-204ENST00000476792 CCDC155Q8N6L0 562 aa24.52■■□□□ 1.52
LIMK1-204ENST00000476792 TIFAQ96CG3 184 aa24.52■■□□□ 1.52
LIMK1-204ENST00000476792 PGBD1Q96JS3 809 aa24.52■■□□□ 1.52
LIMK1-204ENST00000476792 PBX4Q9BYU1 374 aa24.52■■□□□ 1.52
LIMK1-204ENST00000476792 LGALS2P05162 132 aa24.51■■□□□ 1.51
LIMK1-204ENST00000476792 ADCY7P51828 1080 aa24.51■■□□□ 1.51
LIMK1-204ENST00000476792 UTP14CQ5TAP6 766 aaKnown RBP24.51■■□□□ 1.51
LIMK1-204ENST00000476792 SLC17A8Q8NDX2 589 aa24.51■■□□□ 1.51
LIMK1-204ENST00000476792 MYLIPQ8WY64 445 aa24.51■■□□□ 1.51
LIMK1-204ENST00000476792 DHX38Q92620 1227 aaKnown RBP24.51■■□□□ 1.51
LIMK1-204ENST00000476792 SLC4A7Q9Y6M7 1214 aa24.51■■□□□ 1.51
LIMK1-204ENST00000476792 SMCO2A6NFE2 343 aa24.5■■□□□ 1.51
LIMK1-204ENST00000476792 H3BRB1 525 aa24.5■■□□□ 1.51
LIMK1-204ENST00000476792 STXBP3O00186 592 aa24.5■■□□□ 1.51
LIMK1-204ENST00000476792 ITGB5P18084 799 aa24.5■■□□□ 1.51
LIMK1-204ENST00000476792 RFC2P35250 354 aa24.5■■□□□ 1.51
Retrieved 100 of 20,778 RNA–protein pairs in 34 ms