RNA–Protein interactions for RNA: ENST00000475506.1

SDHB-205, Transcript of succinate dehydrogenase complex iron sulfur subunit B, humanhuman

TSL 2

Gene SDHB, Length 550 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDHB-205ENST00000475506 THAP5Q7Z6K1 395 aa7.25□□□□□ -1.25
SDHB-205ENST00000475506 EXOC8Q8IYI6 725 aa7.25□□□□□ -1.25
SDHB-205ENST00000475506 EFHBQ8N7U6 833 aa7.25□□□□□ -1.25
SDHB-205ENST00000475506 C1orf162Q8NEQ5 155 aaPredicted RBP7.25□□□□□ -1.25
SDHB-205ENST00000475506 CHAMP1Q96JM3 812 aa7.25□□□□□ -1.25
SDHB-205ENST00000475506 MKNK2Q9HBH9 465 aa7.25□□□□□ -1.25
SDHB-205ENST00000475506 TCF7L1Q9HCS4 588 aa7.25□□□□□ -1.25
SDHB-205ENST00000475506 LUC7LQ9NQ29 371 aaKnown RBP7.25□□□□□ -1.25
SDHB-205ENST00000475506 GSTA4O15217 222 aa7.24□□□□□ -1.25
SDHB-205ENST00000475506 MYO1BO43795 1136 aa7.24□□□□□ -1.25
SDHB-205ENST00000475506 PCDHGA12O60330 932 aa7.24□□□□□ -1.25
SDHB-205ENST00000475506 KRT37O76014 449 aa7.24□□□□□ -1.25
SDHB-205ENST00000475506 COL6A2P12110 1019 aa7.24□□□□□ -1.25
SDHB-205ENST00000475506 KRT15P19012 456 aa7.24□□□□□ -1.25
SDHB-205ENST00000475506 SLC9A1P19634 815 aa7.24□□□□□ -1.25
SDHB-205ENST00000475506 FPR2P25090 351 aa7.24□□□□□ -1.25
SDHB-205ENST00000475506 LTKP29376 864 aa7.24□□□□□ -1.25
SDHB-205ENST00000475506 CRY1Q16526 586 aa7.24□□□□□ -1.25
SDHB-205ENST00000475506 ARHGAP44Q17R89 818 aa7.24□□□□□ -1.25
SDHB-205ENST00000475506 HABP4Q5JVS0 413 aaKnown RBP7.24□□□□□ -1.25
SDHB-205ENST00000475506 DUSP27Q5VZP5 1158 aa7.24□□□□□ -1.25
SDHB-205ENST00000475506 TP53INP1Q96A56 240 aa7.24□□□□□ -1.25
SDHB-205ENST00000475506 FAXDC2Q96IV6 333 aa7.24□□□□□ -1.25
SDHB-205ENST00000475506 BOCQ9BWV1 1114 aa7.24□□□□□ -1.25
SDHB-205ENST00000475506 ATP13A1Q9HD20 1204 aa7.24□□□□□ -1.25
SDHB-205ENST00000475506 TOPORSQ9NS56 1045 aaPredicted RBP7.24□□□□□ -1.25
SDHB-205ENST00000475506 BTG4Q9NY30 223 aa7.24□□□□□ -1.25
SDHB-205ENST00000475506 PCDHGA9Q9Y5G4 932 aaKnown RBP7.24□□□□□ -1.25
SDHB-205ENST00000475506 PCDHGA8Q9Y5G5 932 aa7.24□□□□□ -1.25
SDHB-205ENST00000475506 PCDHGA7Q9Y5G6 932 aa7.24□□□□□ -1.25
SDHB-205ENST00000475506 PCDHGA6Q9Y5G7 932 aa7.24□□□□□ -1.25
SDHB-205ENST00000475506 PCDHGA3Q9Y5H0 932 aa7.24□□□□□ -1.25
SDHB-205ENST00000475506 PCDHGA2Q9Y5H1 932 aa7.24□□□□□ -1.25
SDHB-205ENST00000475506 LCHNA4D1U4 455 aa7.23□□□□□ -1.25
SDHB-205ENST00000475506 C1QTNF9BB2RNN3 333 aa7.23□□□□□ -1.25
SDHB-205ENST00000475506 NKRFO15226 690 aaKnown RBP eCLIP7.23□□□□□ -1.25
SDHB-205ENST00000475506 TBC1D8O95759 1140 aa7.23□□□□□ -1.25
SDHB-205ENST00000475506 RBP3P10745 1247 aa7.23□□□□□ -1.25
SDHB-205ENST00000475506 RPL10P27635 214 aaKnown RBP7.23□□□□□ -1.25
SDHB-205ENST00000475506 CLCN7P51798 805 aa7.23□□□□□ -1.25
SDHB-205ENST00000475506 LRRC32Q14392 662 aa7.23□□□□□ -1.25
SDHB-205ENST00000475506 TERF2Q15554 542 aa7.23□□□□□ -1.25
SDHB-205ENST00000475506 ANGEL2Q5VTE6 544 aaKnown RBP7.23□□□□□ -1.25
SDHB-205ENST00000475506 CYP2R1Q6VVX0 501 aa7.23□□□□□ -1.25
SDHB-205ENST00000475506 PRR23CQ6ZRP0 262 aa7.23□□□□□ -1.25
SDHB-205ENST00000475506 WAPLQ7Z5K2 1190 aa7.23□□□□□ -1.25
SDHB-205ENST00000475506 PTRH1Q86Y79 214 aaKnown RBP7.23□□□□□ -1.25
SDHB-205ENST00000475506 CREG2Q8IUH2 290 aa7.23□□□□□ -1.25
SDHB-205ENST00000475506 TEX2Q8IWB9 1127 aa7.23□□□□□ -1.25
SDHB-205ENST00000475506 Q8N1Y9 231 aa7.23□□□□□ -1.25
SDHB-205ENST00000475506 PLD6Q8N2A8 252 aaKnown RBP7.23□□□□□ -1.25
SDHB-205ENST00000475506 CPA6Q8N4T0 437 aa7.23□□□□□ -1.25
SDHB-205ENST00000475506 NAT16Q8N8M0 369 aa7.23□□□□□ -1.25
SDHB-205ENST00000475506 SH3RF2Q8TEC5 729 aa7.23□□□□□ -1.25
SDHB-205ENST00000475506 RPS6KC1Q96S38 1066 aa7.23□□□□□ -1.25
SDHB-205ENST00000475506 ELF4Q99607 663 aaPredicted RBP7.23□□□□□ -1.25
SDHB-205ENST00000475506 GULP1Q9UBP9 304 aa7.23□□□□□ -1.25
SDHB-205ENST00000475506 PITPNM2Q9BZ72 1349 aa7.23□□□□□ -1.25
SDHB-205ENST00000475506 H7BY64 318 aa7.22□□□□□ -1.25
SDHB-205ENST00000475506 H2AFYO75367 372 aaKnown RBP7.22□□□□□ -1.25
SDHB-205ENST00000475506 KRT18P05783 430 aaKnown RBP7.22□□□□□ -1.25
SDHB-205ENST00000475506 PF4V1P10720 104 aa7.22□□□□□ -1.25
SDHB-205ENST00000475506 SMAD3P84022 425 aaKnown RBP7.22□□□□□ -1.25
SDHB-205ENST00000475506 EGR3Q06889 387 aa7.22□□□□□ -1.25
SDHB-205ENST00000475506 FAPQ12884 760 aa7.22□□□□□ -1.25
SDHB-205ENST00000475506 GPR19Q15760 415 aa7.22□□□□□ -1.25
SDHB-205ENST00000475506 SMAD2Q15796 467 aaKnown RBP7.22□□□□□ -1.25
SDHB-205ENST00000475506 HHIPL2Q6UWX4 724 aa7.22□□□□□ -1.25
SDHB-205ENST00000475506 ARHGAP36Q6ZRI8 547 aa7.22□□□□□ -1.25
SDHB-205ENST00000475506 ARHGAP27Q6ZUM4 889 aa7.22□□□□□ -1.25
SDHB-205ENST00000475506 CEP68Q76N32 757 aa7.22□□□□□ -1.25
SDHB-205ENST00000475506 ALYREFQ86V81 257 aaKnown RBP7.22□□□□□ -1.25
SDHB-205ENST00000475506 NOSTRINQ8IVI9 506 aa7.22□□□□□ -1.25
SDHB-205ENST00000475506 TMEM169Q96HH4 297 aa7.22□□□□□ -1.25
SDHB-205ENST00000475506 MYH16Q9H6N6 1097 aa7.22□□□□□ -1.25
SDHB-205ENST00000475506 LRRC4CQ9HCJ2 640 aa7.22□□□□□ -1.25
SDHB-205ENST00000475506 FBLN5Q9UBX5 448 aa7.22□□□□□ -1.25
SDHB-205ENST00000475506 ZBTB21Q9ULJ3 1066 aa7.22□□□□□ -1.25
SDHB-205ENST00000475506 SPO11Q9Y5K1 396 aa7.22□□□□□ -1.25
SDHB-205ENST00000475506 SLC12A8A0AV02 714 aa7.21□□□□□ -1.26
SDHB-205ENST00000475506 VSTM5A8MXK1 200 aa7.21□□□□□ -1.26
SDHB-205ENST00000475506 MAN2B1O00754 1011 aa7.21□□□□□ -1.26
SDHB-205ENST00000475506 NPHS1O60500 1241 aa7.21□□□□□ -1.26
SDHB-205ENST00000475506 SNUPNO95149 360 aaKnown RBP7.21□□□□□ -1.26
SDHB-205ENST00000475506 GTF2A2P52657 109 aa7.21□□□□□ -1.26
SDHB-205ENST00000475506 SCAND1P57086 179 aa7.21□□□□□ -1.26
SDHB-205ENST00000475506 IRF9Q00978 393 aa7.21□□□□□ -1.26
SDHB-205ENST00000475506 NFIAQ12857 509 aa7.21□□□□□ -1.26
SDHB-205ENST00000475506 BIRC2Q13490 618 aa7.21□□□□□ -1.26
SDHB-205ENST00000475506 PDCD1Q15116 288 aa7.21□□□□□ -1.26
SDHB-205ENST00000475506 SEC23AQ15436 765 aa7.21□□□□□ -1.26
SDHB-205ENST00000475506 SYCP2LQ5T4T6 812 aa7.21□□□□□ -1.26
SDHB-205ENST00000475506 CXorf57Q6NSI4 855 aaKnown RBP7.21□□□□□ -1.26
SDHB-205ENST00000475506 PGM2L1Q6PCE3 622 aa7.21□□□□□ -1.26
SDHB-205ENST00000475506 TMPRSS7Q7RTY8 843 aa7.21□□□□□ -1.26
SDHB-205ENST00000475506 KIAA1958Q8N8K9 716 aa7.21□□□□□ -1.26
SDHB-205ENST00000475506 SHKBP1Q8TBC3 707 aa7.21□□□□□ -1.26
SDHB-205ENST00000475506 PLEKHO2Q8TD55 490 aa7.21□□□□□ -1.26
SDHB-205ENST00000475506 MORC4Q8TE76 937 aa7.21□□□□□ -1.26
SDHB-205ENST00000475506 FCRL2Q96LA5 508 aaPredicted RBP7.21□□□□□ -1.26
Retrieved 100 of 20,778 RNA–protein pairs in 26.5 ms