RNA–Protein interactions for RNA: ENST00000475329.5

TRAF4-210, Transcript of TNF receptor associated factor 4, humanhuman

TSL 3

Gene TRAF4, Length 544 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF4-210ENST00000475329 ZBTB48P10074 688 aaPredicted RBP15.43■□□□□ 0.06
TRAF4-210ENST00000475329 BCRP11274 1271 aa15.43■□□□□ 0.06
TRAF4-210ENST00000475329 EIF2AK2P19525 551 aaKnown RBP15.43■□□□□ 0.06
TRAF4-210ENST00000475329 CCND2P30279 289 aa15.43■□□□□ 0.06
TRAF4-210ENST00000475329 CCT6AP40227 531 aaKnown RBP15.43■□□□□ 0.06
TRAF4-210ENST00000475329 SARSP49591 514 aaKnown RBP15.43■□□□□ 0.06
TRAF4-210ENST00000475329 SPIRE1Q08AE8 756 aa15.43■□□□□ 0.06
TRAF4-210ENST00000475329 TMEM119Q4V9L6 283 aa15.43■□□□□ 0.06
TRAF4-210ENST00000475329 LRCH2Q5VUJ6 765 aa15.43■□□□□ 0.06
TRAF4-210ENST00000475329 HAUS3Q68CZ6 603 aa15.43■□□□□ 0.06
TRAF4-210ENST00000475329 NCAPH2Q6IBW4 605 aa15.43■□□□□ 0.06
TRAF4-210ENST00000475329 XRRA1Q6P2D8 792 aa15.43■□□□□ 0.06
TRAF4-210ENST00000475329 POTEEQ6S8J3 1075 aa15.43■□□□□ 0.06
TRAF4-210ENST00000475329 SPATA20Q8TB22 786 aa15.43■□□□□ 0.06
TRAF4-210ENST00000475329 UIMC1Q96RL1 719 aa15.43■□□□□ 0.06
TRAF4-210ENST00000475329 PDCD2LQ9BRP1 358 aa15.43■□□□□ 0.06
TRAF4-210ENST00000475329 CYP39A1Q9NYL5 469 aa15.43■□□□□ 0.06
TRAF4-210ENST00000475329 VAV3Q9UKW4 847 aa15.43■□□□□ 0.06
TRAF4-210ENST00000475329 SLC45A1Q9Y2W3 748 aa15.43■□□□□ 0.06
TRAF4-210ENST00000475329 UBIAD1Q9Y5Z9 338 aa15.43■□□□□ 0.06
TRAF4-210ENST00000475329 PLXNA1Q9UIW2 1896 aa15.43■□□□□ 0.06
TRAF4-210ENST00000475329 DOCK5Q9H7D0 1870 aa15.42■□□□□ 0.06
TRAF4-210ENST00000475329 CCL15-CCL14A0A0B4J2E2 113 aa15.42■□□□□ 0.06
TRAF4-210ENST00000475329 SLC25A27O95847 323 aa15.42■□□□□ 0.06
TRAF4-210ENST00000475329 CCL15Q16663 113 aa15.42■□□□□ 0.06
TRAF4-210ENST00000475329 HYIQ5T013 277 aa15.42■□□□□ 0.06
TRAF4-210ENST00000475329 SPRYD7Q5W111 196 aa15.42■□□□□ 0.06
TRAF4-210ENST00000475329 NSUN6Q8TEA1 469 aaKnown RBP15.42■□□□□ 0.06
TRAF4-210ENST00000475329 STAMQ92783 540 aa15.42■□□□□ 0.06
TRAF4-210ENST00000475329 MS4A4AQ96JQ5 239 aa15.42■□□□□ 0.06
TRAF4-210ENST00000475329 PNMA5Q96PV4 448 aa15.42■□□□□ 0.06
TRAF4-210ENST00000475329 GSDMAQ96QA5 445 aa15.42■□□□□ 0.06
TRAF4-210ENST00000475329 BPIFA3Q9BQP9 254 aa15.42■□□□□ 0.06
TRAF4-210ENST00000475329 ZNF577Q9BSK1 485 aa15.42■□□□□ 0.06
TRAF4-210ENST00000475329 WDR11Q9BZH6 1224 aa15.42■□□□□ 0.06
TRAF4-210ENST00000475329 NT5C3AQ9H0P0 336 aa15.42■□□□□ 0.06
TRAF4-210ENST00000475329 KBTBD4Q9NVX7 518 aa15.42■□□□□ 0.06
TRAF4-210ENST00000475329 DACH1Q9UI36 760 aa15.42■□□□□ 0.06
TRAF4-210ENST00000475329 GAS7O60861 476 aa15.41■□□□□ 0.06
TRAF4-210ENST00000475329 PSMD10O75832 226 aa15.41■□□□□ 0.06
TRAF4-210ENST00000475329 ARP10275 920 aa15.41■□□□□ 0.06
TRAF4-210ENST00000475329 MYCLP12524 364 aaPredicted RBP15.41■□□□□ 0.06
TRAF4-210ENST00000475329 ITGB5P18084 799 aa15.41■□□□□ 0.06
TRAF4-210ENST00000475329 MRPS9P82933 396 aaKnown RBP15.41■□□□□ 0.06
TRAF4-210ENST00000475329 AMPD3Q01432 767 aa15.41■□□□□ 0.06
TRAF4-210ENST00000475329 PPP2R5CQ13362 524 aa15.41■□□□□ 0.06
TRAF4-210ENST00000475329 MORC3Q14149 939 aa15.41■□□□□ 0.06
TRAF4-210ENST00000475329 CST9Q5W186 159 aa15.41■□□□□ 0.06
TRAF4-210ENST00000475329 ISM2Q6H9L7 571 aa15.41■□□□□ 0.06
TRAF4-210ENST00000475329 DHX30Q7L2E3 1194 aaKnown RBP eCLIP15.41■□□□□ 0.06
TRAF4-210ENST00000475329 ANKRD23Q86SG2 305 aa15.41■□□□□ 0.06
TRAF4-210ENST00000475329 LUZP1Q86V48 1076 aa15.41■□□□□ 0.06
TRAF4-210ENST00000475329 NCAPG2Q86XI2 1143 aa15.41■□□□□ 0.06
TRAF4-210ENST00000475329 LRRC15Q8TF66 581 aa15.41■□□□□ 0.06
TRAF4-210ENST00000475329 RAD54LQ92698 747 aa15.41■□□□□ 0.06
TRAF4-210ENST00000475329 MTRQ99707 1265 aa15.41■□□□□ 0.06
TRAF4-210ENST00000475329 TEKT3Q9BXF9 490 aa15.41■□□□□ 0.06
TRAF4-210ENST00000475329 MOV10L1Q9BXT6 1211 aaKnown RBP15.41■□□□□ 0.06
TRAF4-210ENST00000475329 BLZF1Q9H2G9 400 aa15.41■□□□□ 0.06
TRAF4-210ENST00000475329 JADE2Q9NQC1 790 aa15.41■□□□□ 0.06
TRAF4-210ENST00000475329 RMND1Q9NWS8 449 aa15.41■□□□□ 0.06
TRAF4-210ENST00000475329 PDHXO00330 501 aa15.4■□□□□ 0.06
TRAF4-210ENST00000475329 IPO5O00410 1097 aaKnown RBP15.4■□□□□ 0.06
TRAF4-210ENST00000475329 PEX10O60683 326 aa15.4■□□□□ 0.06
TRAF4-210ENST00000475329 RPN1P04843 607 aaKnown RBP15.4■□□□□ 0.06
TRAF4-210ENST00000475329 CASP1P29466 404 aa15.4■□□□□ 0.06
TRAF4-210ENST00000475329 HUNKP57058 714 aa15.4■□□□□ 0.06
TRAF4-210ENST00000475329 MKRN3Q13064 507 aaKnown RBP15.4■□□□□ 0.06
TRAF4-210ENST00000475329 CUL4BQ13620 913 aa15.4■□□□□ 0.06
TRAF4-210ENST00000475329 IQCB1Q15051 598 aa15.4■□□□□ 0.06
TRAF4-210ENST00000475329 SV2BQ7L1I2 683 aa15.4■□□□□ 0.06
TRAF4-210ENST00000475329 ANKRD35Q8N283 1001 aa15.4■□□□□ 0.06
TRAF4-210ENST00000475329 MLKLQ8NB16 471 aa15.4■□□□□ 0.06
TRAF4-210ENST00000475329 DNERQ8NFT8 737 aa15.4■□□□□ 0.06
TRAF4-210ENST00000475329 BRI3BPQ8WY22 251 aa15.4■□□□□ 0.06
TRAF4-210ENST00000475329 LARP4BQ92615 738 aaKnown RBP15.4■□□□□ 0.06
TRAF4-210ENST00000475329 ZFP91Q96JP5 570 aaPredicted RBP15.4■□□□□ 0.06
TRAF4-210ENST00000475329 PURBQ96QR8 312 aaKnown RBP15.4■□□□□ 0.06
TRAF4-210ENST00000475329 RIT2Q99578 217 aa15.4■□□□□ 0.06
TRAF4-210ENST00000475329 NUDT12Q9BQG2 462 aa15.4■□□□□ 0.06
TRAF4-210ENST00000475329 BLOC1S4Q9NUP1 217 aa15.4■□□□□ 0.06
TRAF4-210ENST00000475329 RBPJLQ9UBG7 517 aa15.4■□□□□ 0.06
TRAF4-210ENST00000475329 POTEB3A0JP26 581 aa15.39■□□□□ 0.05
TRAF4-210ENST00000475329 BECN2A8MW95 431 aa15.39■□□□□ 0.05
TRAF4-210ENST00000475329 BTBD19C9JJ37 291 aa15.39■□□□□ 0.05
TRAF4-210ENST00000475329 GOLGA6L19H0YKK7 550 aa15.39■□□□□ 0.05
TRAF4-210ENST00000475329 STAM2O75886 525 aa15.39■□□□□ 0.05
TRAF4-210ENST00000475329 NR3C2P08235 984 aa15.39■□□□□ 0.05
TRAF4-210ENST00000475329 SEMA3FQ13275 785 aa15.39■□□□□ 0.05
TRAF4-210ENST00000475329 MTMR1Q13613 665 aa15.39■□□□□ 0.05
TRAF4-210ENST00000475329 POTEBQ6S5H4 581 aa15.39■□□□□ 0.05
TRAF4-210ENST00000475329 OTOP1Q7RTM1 612 aa15.39■□□□□ 0.05
TRAF4-210ENST00000475329 AOPEPQ8N6M6 819 aa15.39■□□□□ 0.05
TRAF4-210ENST00000475329 SMCR8Q8TEV9 937 aaPredicted RBP15.39■□□□□ 0.05
TRAF4-210ENST00000475329 CCDC47Q96A33 483 aaKnown RBP15.39■□□□□ 0.05
TRAF4-210ENST00000475329 LRRC27Q9C0I9 530 aa15.39■□□□□ 0.05
TRAF4-210ENST00000475329 AGO4Q9HCK5 861 aaKnown RBP15.39■□□□□ 0.05
TRAF4-210ENST00000475329 TXNRD2Q9NNW7 524 aa15.39■□□□□ 0.05
TRAF4-210ENST00000475329 KCNH7Q9NS40 1196 aa15.39■□□□□ 0.05
TRAF4-210ENST00000475329 MED24O75448 989 aa15.38■□□□□ 0.05
Retrieved 100 of 20,778 RNA–protein pairs in 14.1 ms