RNA–Protein interactions for RNA: ENST00000474839.5

SKIV2L-208, Transcript of Ski2 like RNA helicase, humanhuman

TSL 2

Gene SKIV2L, Length 3,378 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKIV2L-208ENST00000474839 CCDC84Q86UT8 332 aaPredicted RBP13.31□□□□□ -0.28
SKIV2L-208ENST00000474839 LARP4BQ92615 738 aaKnown RBP13.31□□□□□ -0.28
SKIV2L-208ENST00000474839 DDX12PQ92771 950 aa13.31□□□□□ -0.28
SKIV2L-208ENST00000474839 SCLT1Q96NL6 688 aa13.31□□□□□ -0.28
SKIV2L-208ENST00000474839 SPAG5Q96R06 1193 aa13.31□□□□□ -0.28
SKIV2L-208ENST00000474839 MAD2L2Q9UI95 211 aa13.31□□□□□ -0.28
SKIV2L-208ENST00000474839 LSP1P33241 339 aa13.31□□□□□ -0.28
SKIV2L-208ENST00000474839 SLC35G1Q2M3R5 365 aa13.31□□□□□ -0.28
SKIV2L-208ENST00000474839 CCDC114Q96M63 670 aa13.31□□□□□ -0.28
SKIV2L-208ENST00000474839 CCSER1Q9C0I3 900 aa13.31□□□□□ -0.28
SKIV2L-208ENST00000474839 SPATA31A5Q5VU36 1347 aa13.3□□□□□ -0.28
SKIV2L-208ENST00000474839 SPATA31A7Q8IWB4 1347 aa13.3□□□□□ -0.28
SKIV2L-208ENST00000474839 ZNF233A6NK53 670 aa13.3□□□□□ -0.28
SKIV2L-208ENST00000474839 STXBP3O00186 592 aa13.3□□□□□ -0.28
SKIV2L-208ENST00000474839 ACTN1P12814 892 aa13.3□□□□□ -0.28
SKIV2L-208ENST00000474839 PICALMQ13492 652 aa13.3□□□□□ -0.28
SKIV2L-208ENST00000474839 UBE2SQ16763 222 aa13.3□□□□□ -0.28
SKIV2L-208ENST00000474839 DCAF17Q5H9S7 520 aaPredicted RBP13.3□□□□□ -0.28
SKIV2L-208ENST00000474839 KRT79Q5XKE5 535 aa13.3□□□□□ -0.28
SKIV2L-208ENST00000474839 EMBQ6PCB8 327 aa13.3□□□□□ -0.28
SKIV2L-208ENST00000474839 MSL3Q8N5Y2 521 aaKnown RBP13.3□□□□□ -0.28
SKIV2L-208ENST00000474839 ECM2O94769 699 aaPredicted RBP13.3□□□□□ -0.28
SKIV2L-208ENST00000474839 CDR1P51861 262 aa13.3□□□□□ -0.28
SKIV2L-208ENST00000474839 SF3B2Q13435 895 aaKnown RBP13.3□□□□□ -0.28
SKIV2L-208ENST00000474839 TMEM266Q2M3C6 531 aa13.3□□□□□ -0.28
SKIV2L-208ENST00000474839 HERC4Q5GLZ8 1057 aaPredicted RBP13.3□□□□□ -0.28
SKIV2L-208ENST00000474839 FAM83BQ5T0W9 1011 aa13.3□□□□□ -0.28
SKIV2L-208ENST00000474839 B4GALNT4Q76KP1 1039 aa13.3□□□□□ -0.28
SKIV2L-208ENST00000474839 REXO1Q8N1G1 1221 aaKnown RBP13.3□□□□□ -0.28
SKIV2L-208ENST00000474839 LRRC47Q8N1G4 583 aaKnown RBP13.3□□□□□ -0.28
SKIV2L-208ENST00000474839 CASKIN2Q8WXE0 1202 aa13.3□□□□□ -0.28
SKIV2L-208ENST00000474839 DDX47Q9H0S4 455 aaKnown RBP13.3□□□□□ -0.28
SKIV2L-208ENST00000474839 BARHL2Q9NY43 387 aa13.3□□□□□ -0.28
SKIV2L-208ENST00000474839 ARPP21Q9UBL0 812 aaPredicted RBP13.3□□□□□ -0.28
SKIV2L-208ENST00000474839 GRIN2DO15399 1336 aa13.3□□□□□ -0.28
SKIV2L-208ENST00000474839 SPEF2Q9C093 1822 aa13.3□□□□□ -0.28
SKIV2L-208ENST00000474839 LOC102724428A0A0B4J2F2 783 aa13.29□□□□□ -0.28
SKIV2L-208ENST00000474839 F8W031 263 aaPredicted RBP13.29□□□□□ -0.28
SKIV2L-208ENST00000474839 HGSO14964 777 aaPredicted RBP13.29□□□□□ -0.28
SKIV2L-208ENST00000474839 RAD51CO43502 376 aa13.29□□□□□ -0.28
SKIV2L-208ENST00000474839 NTSR2O95665 410 aa13.29□□□□□ -0.28
SKIV2L-208ENST00000474839 CTNNA1P35221 906 aaKnown RBP13.29□□□□□ -0.28
SKIV2L-208ENST00000474839 GNAQP50148 359 aa13.29□□□□□ -0.28
SKIV2L-208ENST00000474839 SIK1P57059 783 aa13.29□□□□□ -0.28
SKIV2L-208ENST00000474839 UBE4AQ14139 1066 aa13.29□□□□□ -0.28
SKIV2L-208ENST00000474839 LLGL1Q15334 1064 aa13.29□□□□□ -0.28
SKIV2L-208ENST00000474839 CCDC113Q9H0I3 377 aa13.29□□□□□ -0.28
SKIV2L-208ENST00000474839 DDX52Q9Y2R4 599 aaKnown RBP eCLIP13.29□□□□□ -0.28
SKIV2L-208ENST00000474839 UTP18Q9Y5J1 556 aaKnown RBP eCLIP13.29□□□□□ -0.28
SKIV2L-208ENST00000474839 A0A087X0T9 212 aa13.29□□□□□ -0.28
SKIV2L-208ENST00000474839 LDHBP07195 334 aaKnown RBP13.29□□□□□ -0.28
SKIV2L-208ENST00000474839 FAM228BP0C875 321 aa13.29□□□□□ -0.28
SKIV2L-208ENST00000474839 RPS8P62241 208 aaKnown RBP13.29□□□□□ -0.28
SKIV2L-208ENST00000474839 IFFO1Q0D2I5 559 aa13.29□□□□□ -0.28
SKIV2L-208ENST00000474839 INTS5Q6P9B9 1019 aaKnown RBP13.29□□□□□ -0.28
SKIV2L-208ENST00000474839 GBP6Q6ZN66 633 aa13.29□□□□□ -0.28
SKIV2L-208ENST00000474839 KCNK18Q7Z418 384 aa13.29□□□□□ -0.28
SKIV2L-208ENST00000474839 ERGIC2Q96RQ1 377 aa13.29□□□□□ -0.28
SKIV2L-208ENST00000474839 CCT8L2Q96SF2 557 aa13.29□□□□□ -0.28
SKIV2L-208ENST00000474839 ATP8A2Q9NTI2 1148 aa13.29□□□□□ -0.28
SKIV2L-208ENST00000474839 FRMD3A2A2Y4 597 aa13.29□□□□□ -0.28
SKIV2L-208ENST00000474839 IRF6O14896 467 aa13.29□□□□□ -0.28
SKIV2L-208ENST00000474839 CAMTA2O94983 1202 aa13.29□□□□□ -0.28
SKIV2L-208ENST00000474839 MAP2K2P36507 400 aa13.29□□□□□ -0.28
SKIV2L-208ENST00000474839 PARP10Q53GL7 1025 aa13.29□□□□□ -0.28
SKIV2L-208ENST00000474839 ALS2CLQ60I27 953 aa13.29□□□□□ -0.28
SKIV2L-208ENST00000474839 COL18A1P39060 1754 aa13.29□□□□□ -0.28
SKIV2L-208ENST00000474839 PHLPP1O60346 1717 aa13.29□□□□□ -0.28
SKIV2L-208ENST00000474839 TJP1Q07157 1748 aa13.29□□□□□ -0.28
SKIV2L-208ENST00000474839 SLC37A4O43826 429 aa13.28□□□□□ -0.28
SKIV2L-208ENST00000474839 FGFR1OPO95684 399 aaKnown RBP13.28□□□□□ -0.28
SKIV2L-208ENST00000474839 GNA11P29992 359 aa13.28□□□□□ -0.28
SKIV2L-208ENST00000474839 ITPK1Q13572 414 aa13.28□□□□□ -0.28
SKIV2L-208ENST00000474839 E2F5Q15329 346 aa13.28□□□□□ -0.28
SKIV2L-208ENST00000474839 RPS6KA1Q15418 735 aa13.28□□□□□ -0.28
SKIV2L-208ENST00000474839 EYA3Q99504 573 aa13.28□□□□□ -0.28
SKIV2L-208ENST00000474839 YY1AP1Q9H869 796 aa13.28□□□□□ -0.28
SKIV2L-208ENST00000474839 UTP3Q9NQZ2 479 aaKnown RBP eCLIP13.28□□□□□ -0.283e-7■■■■■ 159
SKIV2L-208ENST00000474839 ORC4O43929 436 aa13.28□□□□□ -0.28
SKIV2L-208ENST00000474839 USP8P40818 1118 aa13.28□□□□□ -0.28
SKIV2L-208ENST00000474839 GRIK5Q16478 980 aa13.28□□□□□ -0.28
SKIV2L-208ENST00000474839 PDXDC1Q6P996 788 aa13.28□□□□□ -0.28
SKIV2L-208ENST00000474839 KRT25Q7Z3Z0 450 aa13.28□□□□□ -0.28
SKIV2L-208ENST00000474839 NBPF5PQ86XG9 351 aaPredicted RBP13.28□□□□□ -0.28
SKIV2L-208ENST00000474839 SEPT12Q8IYM1 358 aa13.28□□□□□ -0.28
SKIV2L-208ENST00000474839 ZNF473Q8WTR7 871 aaKnown RBP13.28□□□□□ -0.28
SKIV2L-208ENST00000474839 LUC7LQ9NQ29 371 aaKnown RBP13.28□□□□□ -0.28
SKIV2L-208ENST00000474839 BMP2KQ9NSY1 1161 aaPredicted RBP13.28□□□□□ -0.28
SKIV2L-208ENST00000474839 SIK3Q9Y2K2 1263 aa13.28□□□□□ -0.28
SKIV2L-208ENST00000474839 NID2Q14112 1375 aa13.28□□□□□ -0.28
SKIV2L-208ENST00000474839 BAZ2AQ9UIF9 1905 aaKnown RBP13.28□□□□□ -0.28
SKIV2L-208ENST00000474839 USP17L5A8MUK1 530 aa13.28□□□□□ -0.28
SKIV2L-208ENST00000474839 E9PMD0 336 aa13.28□□□□□ -0.28
SKIV2L-208ENST00000474839 GCOM1H8Y6P7 765 aaPredicted RBP13.28□□□□□ -0.28
SKIV2L-208ENST00000474839 MYZAPP0CAP1 466 aa13.28□□□□□ -0.28
SKIV2L-208ENST00000474839 COPB2P35606 906 aa13.28□□□□□ -0.28
SKIV2L-208ENST00000474839 SLC16A2P36021 539 aa13.28□□□□□ -0.28
SKIV2L-208ENST00000474839 CCDC121Q6ZUS5 278 aa13.28□□□□□ -0.28
SKIV2L-208ENST00000474839 TRMT1LQ7Z2T5 733 aaKnown RBP13.28□□□□□ -0.28
SKIV2L-208ENST00000474839 MYOCDQ8IZQ8 938 aa13.28□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 15.9 ms