RNA–Protein interactions for RNA: ENST00000474838.1

ITGB5-205, Transcript of integrin subunit beta 5, humanhuman

TSL 3

Gene ITGB5, Length 475 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITGB5-205ENST00000474838 MFSD10Q14728 455 aa18.64■□□□□ 0.57
ITGB5-205ENST00000474838 HSDL1Q3SXM5 330 aa18.64■□□□□ 0.57
ITGB5-205ENST00000474838 TMTC3Q6ZXV5 915 aa18.64■□□□□ 0.57
ITGB5-205ENST00000474838 MICU3Q86XE3 530 aa18.64■□□□□ 0.57
ITGB5-205ENST00000474838 CMTR1Q8N1G2 835 aaKnown RBP18.64■□□□□ 0.57
ITGB5-205ENST00000474838 C7orf31Q8N865 590 aa18.64■□□□□ 0.57
ITGB5-205ENST00000474838 FANCBQ8NB91 859 aa18.64■□□□□ 0.57
ITGB5-205ENST00000474838 GPKOWQ92917 476 aaPredicted RBP eCLIP18.64■□□□□ 0.57
ITGB5-205ENST00000474838 ZFP91Q96JP5 570 aaPredicted RBP18.64■□□□□ 0.57
ITGB5-205ENST00000474838 NEK1Q96PY6 1258 aa18.64■□□□□ 0.57
ITGB5-205ENST00000474838 CTAGE1Q96RT6 745 aa18.64■□□□□ 0.57
ITGB5-205ENST00000474838 SLC4A7Q9Y6M7 1214 aa18.64■□□□□ 0.57
ITGB5-205ENST00000474838 ZBBXA8MT70 800 aa18.63■□□□□ 0.57
ITGB5-205ENST00000474838 MEIS2O14770 477 aa18.63■□□□□ 0.57
ITGB5-205ENST00000474838 PPFIA4O75335 1185 aa18.63■□□□□ 0.57
ITGB5-205ENST00000474838 IQCF3P0C7M6 154 aa18.63■□□□□ 0.57
ITGB5-205ENST00000474838 ICAM3P32942 547 aa18.63■□□□□ 0.57
ITGB5-205ENST00000474838 MRPS9P82933 396 aaKnown RBP18.63■□□□□ 0.57
ITGB5-205ENST00000474838 RBL2Q08999 1139 aa18.63■□□□□ 0.57
ITGB5-205ENST00000474838 GRIN2CQ14957 1233 aa18.63■□□□□ 0.57
ITGB5-205ENST00000474838 KIAA0753Q2KHM9 967 aa18.63■□□□□ 0.57
ITGB5-205ENST00000474838 TSGA10IPQ3SY00 556 aa18.63■□□□□ 0.57
ITGB5-205ENST00000474838 PCNX4Q63HM2 1172 aa18.63■□□□□ 0.57
ITGB5-205ENST00000474838 XRRA1Q6P2D8 792 aa18.63■□□□□ 0.57
ITGB5-205ENST00000474838 APOA5Q6Q788 366 aa18.63■□□□□ 0.57
ITGB5-205ENST00000474838 USP17L6PQ6QN14 398 aa18.63■□□□□ 0.57
ITGB5-205ENST00000474838 DEFB128Q7Z7B8 93 aa18.63■□□□□ 0.57
ITGB5-205ENST00000474838 RAB11FIP4Q86YS3 637 aa18.63■□□□□ 0.57
ITGB5-205ENST00000474838 MAFAQ8NHW3 353 aaPredicted RBP18.63■□□□□ 0.57
ITGB5-205ENST00000474838 AFAP1L1Q8TED9 768 aa18.63■□□□□ 0.57
ITGB5-205ENST00000474838 MLXIPQ9HAP2 919 aa18.63■□□□□ 0.57
ITGB5-205ENST00000474838 HDAC6Q9UBN7 1215 aa18.63■□□□□ 0.57
ITGB5-205ENST00000474838 MSRAQ9UJ68 235 aa18.63■□□□□ 0.57
ITGB5-205ENST00000474838 FIBPO43427 364 aa18.62■□□□□ 0.57
ITGB5-205ENST00000474838 SORBS3O60504 671 aa18.62■□□□□ 0.57
ITGB5-205ENST00000474838 ACTN1P12814 892 aa18.62■□□□□ 0.57
ITGB5-205ENST00000474838 KRT32Q14532 448 aa18.62■□□□□ 0.57
ITGB5-205ENST00000474838 SYNE3Q6ZMZ3 975 aa18.62■□□□□ 0.57
ITGB5-205ENST00000474838 CCDC136Q96JN2 1154 aa18.62■□□□□ 0.57
ITGB5-205ENST00000474838 ALG1Q9BT22 464 aa18.62■□□□□ 0.57
ITGB5-205ENST00000474838 SPATA31C2B4DYI2 1134 aa18.61■□□□□ 0.57
ITGB5-205ENST00000474838 EXOSC10Q01780 885 aaKnown RBP18.61■□□□□ 0.57
ITGB5-205ENST00000474838 NEDD9Q14511 834 aa18.61■□□□□ 0.57
ITGB5-205ENST00000474838 DHX32Q7L7V1 743 aaKnown RBP18.61■□□□□ 0.57
ITGB5-205ENST00000474838 RASEFQ8IZ41 740 aa18.61■□□□□ 0.57
ITGB5-205ENST00000474838 DHX38Q92620 1227 aaKnown RBP18.61■□□□□ 0.57
ITGB5-205ENST00000474838 PSTPIP2Q9H939 334 aa18.61■□□□□ 0.57
ITGB5-205ENST00000474838 RBM28Q9NW13 759 aaKnown RBP18.61■□□□□ 0.57
ITGB5-205ENST00000474838 SCN5AQ14524 2016 aa18.61■□□□□ 0.57
ITGB5-205ENST00000474838 CNTNAP5Q8WYK1 1306 aa18.6■□□□□ 0.57
ITGB5-205ENST00000474838 hCG_1642624A0A1W2PR95 340 aa18.6■□□□□ 0.57
ITGB5-205ENST00000474838 SELPP16109 830 aa18.6■□□□□ 0.57
ITGB5-205ENST00000474838 ATP2A2P16615 1042 aaKnown RBP18.6■□□□□ 0.57
ITGB5-205ENST00000474838 SEMA3FQ13275 785 aa18.6■□□□□ 0.57
ITGB5-205ENST00000474838 PTK7Q13308 1070 aa18.6■□□□□ 0.57
ITGB5-205ENST00000474838 ADCK5Q3MIX3 580 aa18.6■□□□□ 0.57
ITGB5-205ENST00000474838 METTL7BQ6UX53 244 aa18.6■□□□□ 0.57
ITGB5-205ENST00000474838 PHF6Q8IWS0 365 aaKnown RBP eCLIP18.6■□□□□ 0.57
ITGB5-205ENST00000474838 CCDC82Q8N4S0 544 aa18.6■□□□□ 0.57
ITGB5-205ENST00000474838 C16orf70Q9BSU1 422 aa18.6■□□□□ 0.57
ITGB5-205ENST00000474838 RTEL1Q9NZ71 1219 aa18.6■□□□□ 0.57
ITGB5-205ENST00000474838 YBX2Q9Y2T7 364 aaKnown RBP18.6■□□□□ 0.57
ITGB5-205ENST00000474838 PCDHA11Q9Y5I1 949 aa18.6■□□□□ 0.57
ITGB5-205ENST00000474838 MYH7BA7E2Y1 1941 aa18.59■□□□□ 0.57
ITGB5-205ENST00000474838 CDH23Q9H251 3354 aa18.59■□□□□ 0.57
ITGB5-205ENST00000474838 NOP56O00567 594 aaKnown RBP18.59■□□□□ 0.57
ITGB5-205ENST00000474838 PARNO95453 639 aaKnown RBP18.59■□□□□ 0.57
ITGB5-205ENST00000474838 HMGB1P09429 215 aaKnown RBP18.59■□□□□ 0.57
ITGB5-205ENST00000474838 LRRC8DQ7L1W4 858 aa18.59■□□□□ 0.57
ITGB5-205ENST00000474838 HEATR3Q7Z4Q2 680 aa18.59■□□□□ 0.57
ITGB5-205ENST00000474838 NLRX1Q86UT6 975 aa18.59■□□□□ 0.57
ITGB5-205ENST00000474838 TCEANC2Q96MN5 208 aa18.59■□□□□ 0.57
ITGB5-205ENST00000474838 FTOQ9C0B1 505 aaKnown RBP eCLIP18.59■□□□□ 0.57
ITGB5-205ENST00000474838 NKX2-4Q9H2Z4 354 aa18.59■□□□□ 0.57
ITGB5-205ENST00000474838 SLC28A3Q9HAS3 691 aa18.59■□□□□ 0.57
ITGB5-205ENST00000474838 GBF1Q92538 1859 aa18.58■□□□□ 0.57
ITGB5-205ENST00000474838 ZBTB43O43298 467 aa18.58■□□□□ 0.56
ITGB5-205ENST00000474838 BAIAP3O94812 1187 aa18.58■□□□□ 0.56
ITGB5-205ENST00000474838 LGALS2P05162 132 aa18.58■□□□□ 0.56
ITGB5-205ENST00000474838 CKBP12277 381 aa18.58■□□□□ 0.56
ITGB5-205ENST00000474838 RCAN1P53805 252 aa18.58■□□□□ 0.56
ITGB5-205ENST00000474838 RTN1Q16799 776 aa18.58■□□□□ 0.56
ITGB5-205ENST00000474838 CYFIP1Q7L576 1253 aa18.58■□□□□ 0.56
ITGB5-205ENST00000474838 GPRASP2Q96D09 838 aa18.58■□□□□ 0.56
ITGB5-205ENST00000474838 SLC9A7Q96T83 725 aa18.58■□□□□ 0.56
ITGB5-205ENST00000474838 GAS2L1Q99501 681 aaPredicted RBP18.58■□□□□ 0.56
ITGB5-205ENST00000474838 SENP7Q9BQF6 1050 aa18.58■□□□□ 0.56
ITGB5-205ENST00000474838 BCAS3Q9H6U6 928 aa18.58■□□□□ 0.56
ITGB5-205ENST00000474838 BRPF3Q9ULD4 1205 aa18.58■□□□□ 0.56
ITGB5-205ENST00000474838 SPDYE3A6NKU9 549 aa18.57■□□□□ 0.56
ITGB5-205ENST00000474838 H3BRB1 525 aa18.57■□□□□ 0.56
ITGB5-205ENST00000474838 HOXC8P31273 242 aa18.57■□□□□ 0.56
ITGB5-205ENST00000474838 RABGGTBP53611 331 aa18.57■□□□□ 0.56
ITGB5-205ENST00000474838 UBE2SQ16763 222 aa18.57■□□□□ 0.56
ITGB5-205ENST00000474838 TRIM71Q2Q1W2 868 aaKnown RBP18.57■□□□□ 0.56
ITGB5-205ENST00000474838 PPP1R18Q6NYC8 613 aa18.57■□□□□ 0.56
ITGB5-205ENST00000474838 TEX2Q8IWB9 1127 aa18.57■□□□□ 0.56
ITGB5-205ENST00000474838 GIMAP8Q8ND71 665 aaPredicted RBP18.57■□□□□ 0.56
ITGB5-205ENST00000474838 PHOSPHO2Q8TCD6 241 aa18.57■□□□□ 0.56
ITGB5-205ENST00000474838 KCNB2Q92953 911 aa18.57■□□□□ 0.56
Retrieved 100 of 20,778 RNA–protein pairs in 13.2 ms