RNA–Protein interactions for RNA: ENST00000474644.1

COL1A1-204, Transcript of collagen type I alpha 1 chain, humanhuman

TSL 3

Gene COL1A1, Length 640 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL1A1-204ENST00000474644 DDX41Q9UJV9 622 aaKnown RBP17.94■□□□□ 0.46
COL1A1-204ENST00000474644 KIAA1217Q5T5P2 1943 aa17.94■□□□□ 0.46
COL1A1-204ENST00000474644 IGLV3-22A0A075B6J6 115 aa17.93■□□□□ 0.46
COL1A1-204ENST00000474644 MYADML2A6NDP7 307 aa17.93■□□□□ 0.46
COL1A1-204ENST00000474644 FAM86B1E9PN63 330 aa17.93■□□□□ 0.46
COL1A1-204ENST00000474644 EDIL3O43854 480 aa17.93■□□□□ 0.46
COL1A1-204ENST00000474644 FAM86B2P0C5J1 330 aa17.93■□□□□ 0.46
COL1A1-204ENST00000474644 CAPN2P17655 700 aa17.93■□□□□ 0.46
COL1A1-204ENST00000474644 ZNF76P36508 570 aa17.93■□□□□ 0.46
COL1A1-204ENST00000474644 GJA9P57773 515 aa17.93■□□□□ 0.46
COL1A1-204ENST00000474644 MTMR1Q13613 665 aa17.93■□□□□ 0.46
COL1A1-204ENST00000474644 CYP2W1Q8TAV3 490 aa17.93■□□□□ 0.46
COL1A1-204ENST00000474644 Q9Y3F1 56 aa17.93■□□□□ 0.46
COL1A1-204ENST00000474644 KIF28PB7ZC32 967 aa17.92■□□□□ 0.46
COL1A1-204ENST00000474644 MEIS1O00470 390 aa17.92■□□□□ 0.46
COL1A1-204ENST00000474644 CTAGE5O15320 804 aa17.92■□□□□ 0.46
COL1A1-204ENST00000474644 TGFB3P10600 412 aa17.92■□□□□ 0.46
COL1A1-204ENST00000474644 CIITAP33076 1130 aa17.92■□□□□ 0.46
COL1A1-204ENST00000474644 USP11P51784 963 aa17.92■□□□□ 0.46
COL1A1-204ENST00000474644 IRX5P78411 483 aaPredicted RBP17.92■□□□□ 0.46
COL1A1-204ENST00000474644 SP2Q02086 613 aa17.92■□□□□ 0.46
COL1A1-204ENST00000474644 ARHGAP1Q07960 439 aa17.92■□□□□ 0.46
COL1A1-204ENST00000474644 LRRC41Q15345 812 aa17.92■□□□□ 0.46
COL1A1-204ENST00000474644 LARP1BQ659C4 914 aaKnown RBP17.92■□□□□ 0.46
COL1A1-204ENST00000474644 NIPA1Q7RTP0 329 aa17.92■□□□□ 0.46
COL1A1-204ENST00000474644 ANKLE1Q8NAG6 615 aa17.92■□□□□ 0.46
COL1A1-204ENST00000474644 OR6J1Q8NGC5 347 aa17.92■□□□□ 0.46
COL1A1-204ENST00000474644 CDHR1Q96JP9 859 aa17.92■□□□□ 0.46
COL1A1-204ENST00000474644 AP5M1Q9H0R1 490 aa17.92■□□□□ 0.46
COL1A1-204ENST00000474644 FOXP1Q9H334 677 aaPredicted RBP17.92■□□□□ 0.46
COL1A1-204ENST00000474644 H3BQV1 296 aa17.91■□□□□ 0.46
COL1A1-204ENST00000474644 DYNC1LI2O43237 492 aaPredicted RBP17.91■□□□□ 0.46
COL1A1-204ENST00000474644 TDP2O95551 362 aa17.91■□□□□ 0.46
COL1A1-204ENST00000474644 GGPS1O95749 300 aa17.91■□□□□ 0.46
COL1A1-204ENST00000474644 GH1P01241 217 aa17.91■□□□□ 0.46
COL1A1-204ENST00000474644 MYCNP04198 464 aaPredicted RBP17.91■□□□□ 0.46
COL1A1-204ENST00000474644 C6orf222P0C671 652 aaPredicted RBP17.91■□□□□ 0.46
COL1A1-204ENST00000474644 CST5P28325 142 aaPredicted RBP17.91■□□□□ 0.46
COL1A1-204ENST00000474644 MNX1P50219 401 aaPredicted RBP17.91■□□□□ 0.46
COL1A1-204ENST00000474644 NKX3-2P78367 333 aa17.91■□□□□ 0.46
COL1A1-204ENST00000474644 SETQ01105 290 aaPredicted RBP17.91■□□□□ 0.46
COL1A1-204ENST00000474644 NEK8Q86SG6 692 aa17.91■□□□□ 0.46
COL1A1-204ENST00000474644 RNF180Q86T96 592 aa17.91■□□□□ 0.46
COL1A1-204ENST00000474644 ARRDC4Q8NCT1 418 aa17.91■□□□□ 0.46
COL1A1-204ENST00000474644 LENG9Q96B70 501 aa17.91■□□□□ 0.46
COL1A1-204ENST00000474644 SPC25Q9HBM1 224 aa17.91■□□□□ 0.46
COL1A1-204ENST00000474644 KCNH7Q9NS40 1196 aa17.91■□□□□ 0.46
COL1A1-204ENST00000474644 MYH7BA7E2Y1 1941 aa17.91■□□□□ 0.46
COL1A1-204ENST00000474644 DNM1LO00429 736 aa17.9■□□□□ 0.46
COL1A1-204ENST00000474644 MAFGO15525 162 aa17.9■□□□□ 0.46
COL1A1-204ENST00000474644 HSP90AA1P07900 732 aaKnown RBP17.9■□□□□ 0.46
COL1A1-204ENST00000474644 ARP10275 920 aa17.9■□□□□ 0.46
COL1A1-204ENST00000474644 KCNA2P16389 499 aa17.9■□□□□ 0.46
COL1A1-204ENST00000474644 PDCP20941 246 aa17.9■□□□□ 0.46
COL1A1-204ENST00000474644 BEX3Q00994 111 aa17.9■□□□□ 0.46
COL1A1-204ENST00000474644 GNL2Q13823 731 aaKnown RBP17.9■□□□□ 0.46
COL1A1-204ENST00000474644 FSCN1Q16658 493 aaKnown RBP17.9■□□□□ 0.46
COL1A1-204ENST00000474644 LETM2Q2VYF4 491 aa17.9■□□□□ 0.46
COL1A1-204ENST00000474644 PRR16Q569H4 304 aa17.9■□□□□ 0.46
COL1A1-204ENST00000474644 MOXD1Q6UVY6 613 aa17.9■□□□□ 0.46
COL1A1-204ENST00000474644 PLA2G4DQ86XP0 818 aa17.9■□□□□ 0.46
COL1A1-204ENST00000474644 NOSTRINQ8IVI9 506 aa17.9■□□□□ 0.46
COL1A1-204ENST00000474644 KLHDC9Q8NEP7 349 aa17.9■□□□□ 0.46
COL1A1-204ENST00000474644 DIS3LQ8TF46 1054 aaKnown RBP17.9■□□□□ 0.46
COL1A1-204ENST00000474644 EMID1Q96A84 441 aaPredicted RBP17.9■□□□□ 0.46
COL1A1-204ENST00000474644 PKD2L1Q9P0L9 805 aa17.9■□□□□ 0.46
COL1A1-204ENST00000474644 CYP3A7-CYP3A51PA0A087WV96 503 aa17.89■□□□□ 0.45
COL1A1-204ENST00000474644 KBTBD13C9JR72 458 aa17.89■□□□□ 0.45
COL1A1-204ENST00000474644 SORBS3O60504 671 aa17.89■□□□□ 0.45
COL1A1-204ENST00000474644 ATP9AO75110 1047 aa17.89■□□□□ 0.45
COL1A1-204ENST00000474644 FARP2O94887 1054 aaPredicted RBP17.89■□□□□ 0.45
COL1A1-204ENST00000474644 CYP3A7P24462 503 aa17.89■□□□□ 0.45
COL1A1-204ENST00000474644 U2AF2P26368 475 aaKnown RBP eCLIP17.89■□□□□ 0.45
COL1A1-204ENST00000474644 NEDD9Q14511 834 aa17.89■□□□□ 0.45
COL1A1-204ENST00000474644 CELF3Q5SZQ8 465 aaKnown RBP17.89■□□□□ 0.45
COL1A1-204ENST00000474644 MYSM1Q5VVJ2 828 aa17.89■□□□□ 0.45
COL1A1-204ENST00000474644 CCSAPQ6IQ19 270 aaPredicted RBP17.89■□□□□ 0.45
COL1A1-204ENST00000474644 DHX37Q8IY37 1157 aaKnown RBP17.89■□□□□ 0.45
COL1A1-204ENST00000474644 MBOAT7Q96N66 472 aa17.89■□□□□ 0.45
COL1A1-204ENST00000474644 SENP7Q9BQF6 1050 aa17.89■□□□□ 0.45
COL1A1-204ENST00000474644 BCAS3Q9H6U6 928 aa17.89■□□□□ 0.45
COL1A1-204ENST00000474644 AGO4Q9HCK5 861 aaKnown RBP17.89■□□□□ 0.45
COL1A1-204ENST00000474644 CPT1AP50416 773 aa17.88■□□□□ 0.45
COL1A1-204ENST00000474644 ITGB3BPQ13352 177 aaPredicted RBP17.88■□□□□ 0.45
COL1A1-204ENST00000474644 LAMC2Q13753 1193 aa17.88■□□□□ 0.45
COL1A1-204ENST00000474644 BECN1Q14457 450 aa17.88■□□□□ 0.45
COL1A1-204ENST00000474644 Q4G0T1 1027 aa17.88■□□□□ 0.45
COL1A1-204ENST00000474644 GNASQ5JWF2 1037 aa17.88■□□□□ 0.45
COL1A1-204ENST00000474644 METTL7BQ6UX53 244 aa17.88■□□□□ 0.45
COL1A1-204ENST00000474644 CYFIP1Q7L576 1253 aa17.88■□□□□ 0.45
COL1A1-204ENST00000474644 UBE2Q1Q7Z7E8 422 aa17.88■□□□□ 0.45
COL1A1-204ENST00000474644 SPRYD3Q8NCJ5 442 aa17.88■□□□□ 0.45
COL1A1-204ENST00000474644 GIMAP8Q8ND71 665 aaPredicted RBP17.88■□□□□ 0.45
COL1A1-204ENST00000474644 AFG1LQ8WV93 481 aa17.88■□□□□ 0.45
COL1A1-204ENST00000474644 PHF24Q9UPV7 400 aa17.88■□□□□ 0.45
COL1A1-204ENST00000474644 VPS37CA5D8V6 355 aaPredicted RBP17.87■□□□□ 0.45
COL1A1-204ENST00000474644 A6NJR5 290 aa17.87■□□□□ 0.45
COL1A1-204ENST00000474644 WNT7AO00755 349 aa17.87■□□□□ 0.45
COL1A1-204ENST00000474644 SLC37A4O43826 429 aa17.87■□□□□ 0.45
COL1A1-204ENST00000474644 CCNT1O60563 726 aaKnown RBP17.87■□□□□ 0.45
Retrieved 100 of 20,778 RNA–protein pairs in 15 ms