RNA–Protein interactions for RNA: ENST00000474256.1

CDPF1-205, Transcript of cysteine rich DPF motif domain containing 1, humanhuman

TSL 3

Gene CDPF1, Length 498 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDPF1-205ENST00000474256 ZNF286BP0CG31 522 aa18.22■□□□□ 0.51
CDPF1-205ENST00000474256 FOSL2P15408 326 aa18.22■□□□□ 0.51
CDPF1-205ENST00000474256 ICAM3P32942 547 aa18.22■□□□□ 0.51
CDPF1-205ENST00000474256 MFSD10Q14728 455 aa18.22■□□□□ 0.51
CDPF1-205ENST00000474256 RAB30Q15771 203 aa18.22■□□□□ 0.51
CDPF1-205ENST00000474256 USP17L6PQ6QN14 398 aa18.22■□□□□ 0.51
CDPF1-205ENST00000474256 DEFB128Q7Z7B8 93 aa18.22■□□□□ 0.51
CDPF1-205ENST00000474256 FANCBQ8NB91 859 aa18.22■□□□□ 0.51
CDPF1-205ENST00000474256 MAFAQ8NHW3 353 aaPredicted RBP18.22■□□□□ 0.51
CDPF1-205ENST00000474256 CAGE1Q8TC20 777 aa18.22■□□□□ 0.51
CDPF1-205ENST00000474256 NEK1Q96PY6 1258 aa18.22■□□□□ 0.51
CDPF1-205ENST00000474256 HDAC6Q9UBN7 1215 aa18.22■□□□□ 0.51
CDPF1-205ENST00000474256 MSRAQ9UJ68 235 aa18.22■□□□□ 0.51
CDPF1-205ENST00000474256 SLC4A7Q9Y6M7 1214 aa18.22■□□□□ 0.51
CDPF1-205ENST00000474256 KIAA1217Q5T5P2 1943 aa18.21■□□□□ 0.51
CDPF1-205ENST00000474256 BAZ2BQ9UIF8 2168 aaKnown RBP18.21■□□□□ 0.51
CDPF1-205ENST00000474256 SPATA31C2B4DYI2 1134 aa18.21■□□□□ 0.51
CDPF1-205ENST00000474256 CDC45O75419 566 aa18.21■□□□□ 0.51
CDPF1-205ENST00000474256 EXOSC10Q01780 885 aaKnown RBP18.21■□□□□ 0.51
CDPF1-205ENST00000474256 RBL2Q08999 1139 aa18.21■□□□□ 0.51
CDPF1-205ENST00000474256 KIAA0753Q2KHM9 967 aa18.21■□□□□ 0.51
CDPF1-205ENST00000474256 GNPTABQ3T906 1256 aa18.21■□□□□ 0.51
CDPF1-205ENST00000474256 TMTC3Q6ZXV5 915 aa18.21■□□□□ 0.51
CDPF1-205ENST00000474256 RAB11FIP4Q86YS3 637 aa18.21■□□□□ 0.51
CDPF1-205ENST00000474256 CCDC155Q8N6L0 562 aa18.21■□□□□ 0.51
CDPF1-205ENST00000474256 C7orf31Q8N865 590 aa18.21■□□□□ 0.51
CDPF1-205ENST00000474256 SMARCC2Q8TAQ2 1214 aa18.21■□□□□ 0.51
CDPF1-205ENST00000474256 DHX38Q92620 1227 aaKnown RBP18.21■□□□□ 0.51
CDPF1-205ENST00000474256 CUL5Q93034 780 aa18.21■□□□□ 0.51
CDPF1-205ENST00000474256 C16orf70Q9BSU1 422 aa18.21■□□□□ 0.51
CDPF1-205ENST00000474256 ALG1Q9BT22 464 aa18.21■□□□□ 0.51
CDPF1-205ENST00000474256 MLXIPQ9HAP2 919 aa18.21■□□□□ 0.51
CDPF1-205ENST00000474256 ZBBXA8MT70 800 aa18.2■□□□□ 0.5
CDPF1-205ENST00000474256 SORBS3O60504 671 aa18.2■□□□□ 0.5
CDPF1-205ENST00000474256 SEMA3FQ13275 785 aa18.2■□□□□ 0.5
CDPF1-205ENST00000474256 PCNX4Q63HM2 1172 aa18.2■□□□□ 0.5
CDPF1-205ENST00000474256 XRRA1Q6P2D8 792 aa18.2■□□□□ 0.5
CDPF1-205ENST00000474256 PHF6Q8IWS0 365 aaKnown RBP eCLIP18.2■□□□□ 0.5
CDPF1-205ENST00000474256 RASEFQ8IZ41 740 aa18.2■□□□□ 0.5
CDPF1-205ENST00000474256 AFAP1L1Q8TED9 768 aa18.2■□□□□ 0.5
CDPF1-205ENST00000474256 BCAS3Q9H6U6 928 aa18.2■□□□□ 0.5
CDPF1-205ENST00000474256 RTEL1Q9NZ71 1219 aa18.2■□□□□ 0.5
CDPF1-205ENST00000474256 YBX2Q9Y2T7 364 aaKnown RBP18.2■□□□□ 0.5
CDPF1-205ENST00000474256 DLL1O00548 723 aa18.19■□□□□ 0.5
CDPF1-205ENST00000474256 FIBPO43427 364 aa18.19■□□□□ 0.5
CDPF1-205ENST00000474256 ACTN1P12814 892 aa18.19■□□□□ 0.5
CDPF1-205ENST00000474256 ATP2A2P16615 1042 aaKnown RBP18.19■□□□□ 0.5
CDPF1-205ENST00000474256 NEDD9Q14511 834 aa18.19■□□□□ 0.5
CDPF1-205ENST00000474256 GPNMBQ14956 572 aa18.19■□□□□ 0.5
CDPF1-205ENST00000474256 ADCK5Q3MIX3 580 aa18.19■□□□□ 0.5
CDPF1-205ENST00000474256 APOA5Q6Q788 366 aa18.19■□□□□ 0.5
CDPF1-205ENST00000474256 DHX32Q7L7V1 743 aaKnown RBP18.19■□□□□ 0.5
CDPF1-205ENST00000474256 MICU3Q86XE3 530 aa18.19■□□□□ 0.5
CDPF1-205ENST00000474256 PSTPIP2Q9H939 334 aa18.19■□□□□ 0.5
CDPF1-205ENST00000474256 hCG_1642624A0A1W2PR95 340 aa18.18■□□□□ 0.5
CDPF1-205ENST00000474256 SELPP16109 830 aa18.18■□□□□ 0.5
CDPF1-205ENST00000474256 RABGGTBP53611 331 aa18.18■□□□□ 0.5
CDPF1-205ENST00000474256 PTK7Q13308 1070 aa18.18■□□□□ 0.5
CDPF1-205ENST00000474256 METTL7BQ6UX53 244 aa18.18■□□□□ 0.5
CDPF1-205ENST00000474256 SYNE3Q6ZMZ3 975 aa18.18■□□□□ 0.5
CDPF1-205ENST00000474256 CCDC82Q8N4S0 544 aa18.18■□□□□ 0.5
CDPF1-205ENST00000474256 NKX2-4Q9H2Z4 354 aa18.18■□□□□ 0.5
CDPF1-205ENST00000474256 BRPF3Q9ULD4 1205 aa18.18■□□□□ 0.5
CDPF1-205ENST00000474256 PCDHA11Q9Y5I1 949 aa18.18■□□□□ 0.5
CDPF1-205ENST00000474256 PARNO95453 639 aaKnown RBP18.17■□□□□ 0.5
CDPF1-205ENST00000474256 CKBP12277 381 aa18.17■□□□□ 0.5
CDPF1-205ENST00000474256 ZNF200P98182 395 aaPredicted RBP18.17■□□□□ 0.5
CDPF1-205ENST00000474256 HIC1Q14526 733 aa18.17■□□□□ 0.5
CDPF1-205ENST00000474256 KRT32Q14532 448 aa18.17■□□□□ 0.5
CDPF1-205ENST00000474256 TRIM71Q2Q1W2 868 aaKnown RBP18.17■□□□□ 0.5
CDPF1-205ENST00000474256 LRRC8DQ7L1W4 858 aa18.17■□□□□ 0.5
CDPF1-205ENST00000474256 CYFIP1Q7L576 1253 aa18.17■□□□□ 0.5
CDPF1-205ENST00000474256 PHOSPHO2Q8TCD6 241 aa18.17■□□□□ 0.5
CDPF1-205ENST00000474256 TCEANC2Q96MN5 208 aa18.17■□□□□ 0.5
CDPF1-205ENST00000474256 SENP7Q9BQF6 1050 aa18.17■□□□□ 0.5
CDPF1-205ENST00000474256 FTOQ9C0B1 505 aaKnown RBP eCLIP18.17■□□□□ 0.5
CDPF1-205ENST00000474256 SLC28A3Q9HAS3 691 aa18.17■□□□□ 0.5
CDPF1-205ENST00000474256 RBM28Q9NW13 759 aaKnown RBP18.17■□□□□ 0.5
CDPF1-205ENST00000474256 A0A0C4DFX4 3053 aa18.17■□□□□ 0.5
CDPF1-205ENST00000474256 H3BRB1 525 aa18.16■□□□□ 0.5
CDPF1-205ENST00000474256 NOP56O00567 594 aaKnown RBP18.16■□□□□ 0.5
CDPF1-205ENST00000474256 BAIAP3O94812 1187 aa18.16■□□□□ 0.5
CDPF1-205ENST00000474256 LGALS2P05162 132 aa18.16■□□□□ 0.5
CDPF1-205ENST00000474256 HOXC8P31273 242 aa18.16■□□□□ 0.5
CDPF1-205ENST00000474256 FUT2Q10981 343 aa18.16■□□□□ 0.5
CDPF1-205ENST00000474256 TRAF7Q6Q0C0 670 aa18.16■□□□□ 0.5
CDPF1-205ENST00000474256 NLRX1Q86UT6 975 aa18.16■□□□□ 0.5
CDPF1-205ENST00000474256 KCNB2Q92953 911 aa18.16■□□□□ 0.5
CDPF1-205ENST00000474256 WNT8BQ93098 351 aa18.16■□□□□ 0.5
CDPF1-205ENST00000474256 CCDC136Q96JN2 1154 aa18.16■□□□□ 0.5
CDPF1-205ENST00000474256 SLC9A7Q96T83 725 aa18.16■□□□□ 0.5
CDPF1-205ENST00000474256 GPR20Q99678 358 aa18.16■□□□□ 0.5
CDPF1-205ENST00000474256 USP26Q9BXU7 913 aa18.16■□□□□ 0.5
CDPF1-205ENST00000474256 PRDM12Q9H4Q4 367 aa18.16■□□□□ 0.5
CDPF1-205ENST00000474256 TUT1Q9H6E5 874 aaKnown RBP18.16■□□□□ 0.5
CDPF1-205ENST00000474256 CXCL10P02778 98 aa18.15■□□□□ 0.5
CDPF1-205ENST00000474256 HMGB1P09429 215 aaKnown RBP18.15■□□□□ 0.5
CDPF1-205ENST00000474256 MYOGP15173 224 aa18.15■□□□□ 0.5
CDPF1-205ENST00000474256 GAS2L1Q99501 681 aaPredicted RBP18.15■□□□□ 0.5
CDPF1-205ENST00000474256 CNTNAP5Q8WYK1 1306 aa18.15■□□□□ 0.5
Retrieved 100 of 20,778 RNA–protein pairs in 29.1 ms