RNA–Protein interactions for RNA: ENST00000473720.5

SMPD4-217, Transcript of sphingomyelin phosphodiesterase 4, humanhuman

TSL 4

Gene SMPD4, Length 555 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD4-217ENST00000473720 ANO2Q9NQ90 1003 aa13.82□□□□□ -0.2
SMPD4-217ENST00000473720 MAP3K20Q9NYL2 800 aaKnown RBP13.82□□□□□ -0.2
SMPD4-217ENST00000473720 RTEL1Q9NZ71 1219 aa13.82□□□□□ -0.2
SMPD4-217ENST00000473720 SIP14410 1827 aa13.82□□□□□ -0.2
SMPD4-217ENST00000473720 A0A0C4DFX4 3053 aa13.81□□□□□ -0.2
SMPD4-217ENST00000473720 UBA1P22314 1058 aaKnown RBP13.81□□□□□ -0.2
SMPD4-217ENST00000473720 RFC2P35250 354 aa13.81□□□□□ -0.2
SMPD4-217ENST00000473720 ZNF200P98182 395 aaPredicted RBP13.81□□□□□ -0.2
SMPD4-217ENST00000473720 SP2Q02086 613 aa13.81□□□□□ -0.2
SMPD4-217ENST00000473720 HSDL1Q3SXM5 330 aa13.81□□□□□ -0.2
SMPD4-217ENST00000473720 CELF3Q5SZQ8 465 aaKnown RBP13.81□□□□□ -0.2
SMPD4-217ENST00000473720 MYSM1Q5VVJ2 828 aa13.81□□□□□ -0.2
SMPD4-217ENST00000473720 VSIG10LQ86VR7 867 aa13.81□□□□□ -0.2
SMPD4-217ENST00000473720 CCDC82Q8N4S0 544 aa13.81□□□□□ -0.2
SMPD4-217ENST00000473720 SAMD3Q8N6K7 520 aa13.81□□□□□ -0.2
SMPD4-217ENST00000473720 SMARCC2Q8TAQ2 1214 aa13.81□□□□□ -0.2
SMPD4-217ENST00000473720 RRP36Q96EU6 259 aaKnown RBP13.81□□□□□ -0.2
SMPD4-217ENST00000473720 LSG1Q9H089 658 aaKnown RBP13.81□□□□□ -0.2
SMPD4-217ENST00000473720 SEC63Q9UGP8 760 aaKnown RBP13.81□□□□□ -0.2
SMPD4-217ENST00000473720 GTF2IRD1Q9UHL9 959 aa13.81□□□□□ -0.2
SMPD4-217ENST00000473720 PCDHA11Q9Y5I1 949 aa13.81□□□□□ -0.2
SMPD4-217ENST00000473720 WDR81Q562E7 1941 aa13.81□□□□□ -0.2
SMPD4-217ENST00000473720 MYH9P35579 1960 aaKnown RBP13.8□□□□□ -0.2
SMPD4-217ENST00000473720 hCG_1642624A0A1W2PR95 340 aa13.8□□□□□ -0.2
SMPD4-217ENST00000473720 SLC27A2O14975 620 aa13.8□□□□□ -0.2
SMPD4-217ENST00000473720 PLEKHA8P1O95397 391 aa13.8□□□□□ -0.2
SMPD4-217ENST00000473720 CA3P07451 260 aa13.8□□□□□ -0.2
SMPD4-217ENST00000473720 KIF5BP33176 963 aa13.8□□□□□ -0.2
SMPD4-217ENST00000473720 MCM5P33992 734 aa13.8□□□□□ -0.2
SMPD4-217ENST00000473720 SP4Q02446 784 aa13.8□□□□□ -0.2
SMPD4-217ENST00000473720 GHRHRQ02643 423 aa13.8□□□□□ -0.2
SMPD4-217ENST00000473720 COL9A3Q14050 684 aaPredicted RBP13.8□□□□□ -0.2
SMPD4-217ENST00000473720 ADGRE1Q14246 886 aa13.8□□□□□ -0.2
SMPD4-217ENST00000473720 KCNV1Q6PIU1 500 aa13.8□□□□□ -0.2
SMPD4-217ENST00000473720 CAGE1Q8TC20 777 aa13.8□□□□□ -0.2
SMPD4-217ENST00000473720 DHX38Q92620 1227 aaKnown RBP13.8□□□□□ -0.2
SMPD4-217ENST00000473720 CUL5Q93034 780 aa13.8□□□□□ -0.2
SMPD4-217ENST00000473720 EMID1Q96A84 441 aaPredicted RBP13.8□□□□□ -0.2
SMPD4-217ENST00000473720 ESYT1Q9BSJ8 1104 aa13.8□□□□□ -0.2
SMPD4-217ENST00000473720 BCAS3Q9H6U6 928 aa13.8□□□□□ -0.2
SMPD4-217ENST00000473720 PRRC2BQ5JSZ5 2229 aaKnown RBP13.8□□□□□ -0.2
SMPD4-217ENST00000473720 EVPLQ92817 2033 aa13.8□□□□□ -0.2
SMPD4-217ENST00000473720 RFXAPO00287 272 aa13.79□□□□□ -0.2
SMPD4-217ENST00000473720 NOP56O00567 594 aaKnown RBP13.79□□□□□ -0.2
SMPD4-217ENST00000473720 DDAH1O94760 285 aa13.79□□□□□ -0.2
SMPD4-217ENST00000473720 CKBP12277 381 aa13.79□□□□□ -0.2
SMPD4-217ENST00000473720 SELPP16109 830 aa13.79□□□□□ -0.2
SMPD4-217ENST00000473720 KCNJ6P48051 423 aa13.79□□□□□ -0.2
SMPD4-217ENST00000473720 CREB3L3Q68CJ9 461 aa13.79□□□□□ -0.2
SMPD4-217ENST00000473720 USP17L6PQ6QN14 398 aa13.79□□□□□ -0.2
SMPD4-217ENST00000473720 LRRC8DQ7L1W4 858 aa13.79□□□□□ -0.2
SMPD4-217ENST00000473720 TMCO2Q7Z6W1 182 aaPredicted RBP13.79□□□□□ -0.2
SMPD4-217ENST00000473720 SESTD1Q86VW0 696 aa13.79□□□□□ -0.2
SMPD4-217ENST00000473720 AFAP1L1Q8TED9 768 aa13.79□□□□□ -0.2
SMPD4-217ENST00000473720 CTAGE1Q96RT6 745 aa13.79□□□□□ -0.2
SMPD4-217ENST00000473720 SLC9A7Q96T83 725 aa13.79□□□□□ -0.2
SMPD4-217ENST00000473720 HAS3O00219 553 aa13.78□□□□□ -0.2
SMPD4-217ENST00000473720 SH2B2O14492 632 aaPredicted RBP13.78□□□□□ -0.2
SMPD4-217ENST00000473720 F2P00734 622 aa13.78□□□□□ -0.2
SMPD4-217ENST00000473720 MRPS9P82933 396 aaKnown RBP13.78□□□□□ -0.2
SMPD4-217ENST00000473720 GNPTABQ3T906 1256 aa13.78□□□□□ -0.2
SMPD4-217ENST00000473720 CYFIP1Q7L576 1253 aa13.78□□□□□ -0.2
SMPD4-217ENST00000473720 SRBD1Q8N5C6 995 aaKnown RBP13.78□□□□□ -0.2
SMPD4-217ENST00000473720 WNT8BQ93098 351 aa13.78□□□□□ -0.2
SMPD4-217ENST00000473720 TMEM87BQ96K49 555 aa13.78□□□□□ -0.2
SMPD4-217ENST00000473720 ZBED2Q9BTP6 218 aa13.78□□□□□ -0.2
SMPD4-217ENST00000473720 SPZ1Q9BXG8 430 aa13.78□□□□□ -0.2
SMPD4-217ENST00000473720 KIF28PB7ZC32 967 aa13.77□□□□□ -0.21
SMPD4-217ENST00000473720 TLL1O43897 1013 aa13.77□□□□□ -0.21
SMPD4-217ENST00000473720 PPFIA4O75335 1185 aa13.77□□□□□ -0.21
SMPD4-217ENST00000473720 TGFB3P10600 412 aa13.77□□□□□ -0.21
SMPD4-217ENST00000473720 GNAQP50148 359 aa13.77□□□□□ -0.21
SMPD4-217ENST00000473720 PTK7Q13308 1070 aa13.77□□□□□ -0.21
SMPD4-217ENST00000473720 HIC1Q14526 733 aa13.77□□□□□ -0.21
SMPD4-217ENST00000473720 ZNF618Q5T7W0 954 aa13.77□□□□□ -0.21
SMPD4-217ENST00000473720 UTP14CQ5TAP6 766 aaKnown RBP13.77□□□□□ -0.21
SMPD4-217ENST00000473720 FAM117BQ6P1L5 589 aa13.77□□□□□ -0.21
SMPD4-217ENST00000473720 MICU3Q86XE3 530 aa13.77□□□□□ -0.21
SMPD4-217ENST00000473720 HERC6Q8IVU3 1022 aa13.77□□□□□ -0.21
SMPD4-217ENST00000473720 TMTC2Q8N394 836 aa13.77□□□□□ -0.21
SMPD4-217ENST00000473720 TCEANC2Q96MN5 208 aa13.77□□□□□ -0.21
SMPD4-217ENST00000473720 MAP3K14Q99558 947 aa13.77□□□□□ -0.21
SMPD4-217ENST00000473720 SLC12A7Q9Y666 1083 aa13.77□□□□□ -0.21
SMPD4-217ENST00000473720 C17orf102A2RUQ5 167 aa13.76□□□□□ -0.21
SMPD4-217ENST00000473720 H3BRB1 525 aa13.76□□□□□ -0.21
SMPD4-217ENST00000473720 NBNO60934 754 aa13.76□□□□□ -0.21
SMPD4-217ENST00000473720 ARHGEF15O94989 841 aa13.76□□□□□ -0.21
SMPD4-217ENST00000473720 LGALS2P05162 132 aa13.76□□□□□ -0.21
SMPD4-217ENST00000473720 CALM1P0DP23 149 aa13.76□□□□□ -0.21
SMPD4-217ENST00000473720 CALM2P0DP24 149 aa13.76□□□□□ -0.21
SMPD4-217ENST00000473720 CALM3P0DP25 149 aa13.76□□□□□ -0.21
SMPD4-217ENST00000473720 THPOP40225 353 aa13.76□□□□□ -0.21
SMPD4-217ENST00000473720 WDR5P61964 334 aaKnown RBP13.76□□□□□ -0.21
SMPD4-217ENST00000473720 DEFB103AP81534 67 aa13.76□□□□□ -0.21
SMPD4-217ENST00000473720 SEMA3FQ13275 785 aa13.76□□□□□ -0.21
SMPD4-217ENST00000473720 GPNMBQ14956 572 aa13.76□□□□□ -0.21
SMPD4-217ENST00000473720 NECTIN1Q15223 517 aa13.76□□□□□ -0.21
SMPD4-217ENST00000473720 SKIV2LQ15477 1246 aaKnown RBP13.76□□□□□ -0.21
SMPD4-217ENST00000473720 UBE2SQ16763 222 aa13.76□□□□□ -0.21
SMPD4-217ENST00000473720 TCTN1Q2MV58 587 aa13.76□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 32.7 ms