RNA–Protein interactions for RNA: ENST00000472892.1

VTI1A-203, Transcript of vesicle transport through interaction with t-SNAREs 1A, humanhuman

TSL 1 (best)

Gene VTI1A, Length 1,247 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VTI1A-203ENST00000472892 CAGE1Q8TC20 777 aa17.67■□□□□ 0.42
VTI1A-203ENST00000472892 PIBF1Q8WXW3 757 aa17.67■□□□□ 0.42
VTI1A-203ENST00000472892 ZFP91Q96JP5 570 aaPredicted RBP17.67■□□□□ 0.42
VTI1A-203ENST00000472892 KATNAL1Q9BW62 490 aa17.67■□□□□ 0.42
VTI1A-203ENST00000472892 HDAC6Q9UBN7 1215 aa17.67■□□□□ 0.42
VTI1A-203ENST00000472892 FRMPD4Q14CM0 1322 aa17.67■□□□□ 0.42
VTI1A-203ENST00000472892 CCDC69A6NI79 296 aa17.66■□□□□ 0.42
VTI1A-203ENST00000472892 ZBBXA8MT70 800 aa17.66■□□□□ 0.42
VTI1A-203ENST00000472892 PIK3CDO00329 1044 aa17.66■□□□□ 0.42
VTI1A-203ENST00000472892 STAM2O75886 525 aa17.66■□□□□ 0.42
VTI1A-203ENST00000472892 GGPS1O95749 300 aa17.66■□□□□ 0.42
VTI1A-203ENST00000472892 ACTN1P12814 892 aa17.66■□□□□ 0.42
VTI1A-203ENST00000472892 ATP2A2P16615 1042 aaKnown RBP17.66■□□□□ 0.42
VTI1A-203ENST00000472892 UBA1P22314 1058 aaKnown RBP17.66■□□□□ 0.42
VTI1A-203ENST00000472892 ICAM3P32942 547 aa17.66■□□□□ 0.42
VTI1A-203ENST00000472892 RABGGTBP53611 331 aa17.66■□□□□ 0.42
VTI1A-203ENST00000472892 MRPS9P82933 396 aaKnown RBP17.66■□□□□ 0.42
VTI1A-203ENST00000472892 KIAA0753Q2KHM9 967 aa17.66■□□□□ 0.42
VTI1A-203ENST00000472892 NFXL1Q6ZNB6 911 aa17.66■□□□□ 0.42
VTI1A-203ENST00000472892 SRBD1Q8N5C6 995 aaKnown RBP17.66■□□□□ 0.42
VTI1A-203ENST00000472892 CCDC155Q8N6L0 562 aa17.66■□□□□ 0.42
VTI1A-203ENST00000472892 AFAP1L1Q8TED9 768 aa17.66■□□□□ 0.42
VTI1A-203ENST00000472892 GPKOWQ92917 476 aaPredicted RBP eCLIP17.66■□□□□ 0.42
VTI1A-203ENST00000472892 SPATA33Q96N06 139 aa17.66■□□□□ 0.42
VTI1A-203ENST00000472892 NKX2-4Q9H2Z4 354 aa17.66■□□□□ 0.42
VTI1A-203ENST00000472892 SLC28A3Q9HAS3 691 aa17.66■□□□□ 0.42
VTI1A-203ENST00000472892 ANO2Q9NQ90 1003 aa17.66■□□□□ 0.42
VTI1A-203ENST00000472892 PCDHA11Q9Y5I1 949 aa17.66■□□□□ 0.42
VTI1A-203ENST00000472892 SPATA31C2B4DYI2 1134 aa17.65■□□□□ 0.42
VTI1A-203ENST00000472892 MEIS2O14770 477 aa17.65■□□□□ 0.42
VTI1A-203ENST00000472892 PLEKHA8P1O95397 391 aa17.65■□□□□ 0.42
VTI1A-203ENST00000472892 ZNF286BP0CG31 522 aa17.65■□□□□ 0.42
VTI1A-203ENST00000472892 CALM1P0DP23 149 aa17.65■□□□□ 0.42
VTI1A-203ENST00000472892 CALM2P0DP24 149 aa17.65■□□□□ 0.42
VTI1A-203ENST00000472892 CALM3P0DP25 149 aa17.65■□□□□ 0.42
VTI1A-203ENST00000472892 RBL2Q08999 1139 aa17.65■□□□□ 0.42
VTI1A-203ENST00000472892 GPNMBQ14956 572 aa17.65■□□□□ 0.42
VTI1A-203ENST00000472892 GNPTABQ3T906 1256 aa17.65■□□□□ 0.42
VTI1A-203ENST00000472892 SKAP1Q86WV1 359 aa17.65■□□□□ 0.42
VTI1A-203ENST00000472892 PHOSPHO2Q8TCD6 241 aa17.65■□□□□ 0.42
VTI1A-203ENST00000472892 DHX38Q92620 1227 aaKnown RBP17.65■□□□□ 0.42
VTI1A-203ENST00000472892 INPP4AQ96PE3 977 aaPredicted RBP17.65■□□□□ 0.42
VTI1A-203ENST00000472892 C16orf70Q9BSU1 422 aa17.65■□□□□ 0.42
VTI1A-203ENST00000472892 ALG1Q9BT22 464 aa17.65■□□□□ 0.42
VTI1A-203ENST00000472892 PRDM12Q9H4Q4 367 aa17.65■□□□□ 0.42
VTI1A-203ENST00000472892 MLXIPQ9HAP2 919 aa17.65■□□□□ 0.42
VTI1A-203ENST00000472892 SEC63Q9UGP8 760 aaKnown RBP17.65■□□□□ 0.42
VTI1A-203ENST00000472892 CHD9Q3L8U1 2897 aa17.65■□□□□ 0.42
VTI1A-203ENST00000472892 SELPP16109 830 aa17.64■□□□□ 0.41
VTI1A-203ENST00000472892 USP17L6PQ6QN14 398 aa17.64■□□□□ 0.41
VTI1A-203ENST00000472892 SMARCC2Q8TAQ2 1214 aa17.64■□□□□ 0.41
VTI1A-203ENST00000472892 CUL5Q93034 780 aa17.64■□□□□ 0.41
VTI1A-203ENST00000472892 GAS2L1Q99501 681 aaPredicted RBP17.64■□□□□ 0.41
VTI1A-203ENST00000472892 COL25A1Q9BXS0 654 aaPredicted RBP17.64■□□□□ 0.41
VTI1A-203ENST00000472892 FTOQ9C0B1 505 aaKnown RBP eCLIP17.64■□□□□ 0.41
VTI1A-203ENST00000472892 BCAS3Q9H6U6 928 aa17.64■□□□□ 0.41
VTI1A-203ENST00000472892 SLC12A7Q9Y666 1083 aa17.64■□□□□ 0.41
VTI1A-203ENST00000472892 SORBS3O60504 671 aa17.63■□□□□ 0.41
VTI1A-203ENST00000472892 PARNO95453 639 aaKnown RBP17.63■□□□□ 0.41
VTI1A-203ENST00000472892 CKBP12277 381 aa17.63■□□□□ 0.41
VTI1A-203ENST00000472892 MYOGP15173 224 aa17.63■□□□□ 0.41
VTI1A-203ENST00000472892 RXRAP19793 462 aa17.63■□□□□ 0.41
VTI1A-203ENST00000472892 PTK7Q13308 1070 aa17.63■□□□□ 0.41
VTI1A-203ENST00000472892 NEDD9Q14511 834 aa17.63■□□□□ 0.41
VTI1A-203ENST00000472892 RNF20Q5VTR2 975 aa17.63■□□□□ 0.41
VTI1A-203ENST00000472892 XRRA1Q6P2D8 792 aa17.63■□□□□ 0.41
VTI1A-203ENST00000472892 LRRC8DQ7L1W4 858 aa17.63■□□□□ 0.41
VTI1A-203ENST00000472892 SGMS1Q86VZ5 419 aa17.63■□□□□ 0.41
VTI1A-203ENST00000472892 CMTR1Q8N1G2 835 aaKnown RBP17.63■□□□□ 0.41
VTI1A-203ENST00000472892 FANCBQ8NB91 859 aa17.63■□□□□ 0.41
VTI1A-203ENST00000472892 LRRC2Q9BYS8 371 aa17.63■□□□□ 0.41
VTI1A-203ENST00000472892 RTEL1Q9NZ71 1219 aa17.63■□□□□ 0.41
VTI1A-203ENST00000472892 PRUNE2Q8WUY3 3088 aa17.63■□□□□ 0.41
VTI1A-203ENST00000472892 SCN5AQ14524 2016 aa17.62■□□□□ 0.41
VTI1A-203ENST00000472892 BAIAP3O94812 1187 aa17.62■□□□□ 0.41
VTI1A-203ENST00000472892 ZNF200P98182 395 aaPredicted RBP17.62■□□□□ 0.41
VTI1A-203ENST00000472892 EXOSC10Q01780 885 aaKnown RBP17.62■□□□□ 0.41
VTI1A-203ENST00000472892 SEMA3FQ13275 785 aa17.62■□□□□ 0.41
VTI1A-203ENST00000472892 ADGRE1Q14246 886 aa17.62■□□□□ 0.41
VTI1A-203ENST00000472892 HIC1Q14526 733 aa17.62■□□□□ 0.41
VTI1A-203ENST00000472892 TRIM71Q2Q1W2 868 aaKnown RBP17.62■□□□□ 0.41
VTI1A-203ENST00000472892 TSGA10IPQ3SY00 556 aa17.62■□□□□ 0.41
VTI1A-203ENST00000472892 PCNX4Q63HM2 1172 aa17.62■□□□□ 0.41
VTI1A-203ENST00000472892 USP38Q8NB14 1042 aa17.62■□□□□ 0.41
VTI1A-203ENST00000472892 SLC9A7Q96T83 725 aa17.62■□□□□ 0.41
VTI1A-203ENST00000472892 PSTPIP2Q9H939 334 aa17.62■□□□□ 0.41
VTI1A-203ENST00000472892 MYH7BA7E2Y1 1941 aa17.61■□□□□ 0.41
VTI1A-203ENST00000472892 H3BRB1 525 aa17.61■□□□□ 0.41
VTI1A-203ENST00000472892 FIBPO43427 364 aa17.61■□□□□ 0.41
VTI1A-203ENST00000472892 CXCL10P02778 98 aa17.61■□□□□ 0.41
VTI1A-203ENST00000472892 TRAF7Q6Q0C0 670 aa17.61■□□□□ 0.41
VTI1A-203ENST00000472892 METTL7BQ6UX53 244 aa17.61■□□□□ 0.41
VTI1A-203ENST00000472892 TMTC3Q6ZXV5 915 aa17.61■□□□□ 0.41
VTI1A-203ENST00000472892 NEK1Q96PY6 1258 aa17.61■□□□□ 0.41
VTI1A-203ENST00000472892 SENP7Q9BQF6 1050 aa17.61■□□□□ 0.41
VTI1A-203ENST00000472892 USP26Q9BXU7 913 aa17.61■□□□□ 0.41
VTI1A-203ENST00000472892 TUT1Q9H6E5 874 aaKnown RBP17.61■□□□□ 0.41
VTI1A-203ENST00000472892 NBNO60934 754 aa17.6■□□□□ 0.41
VTI1A-203ENST00000472892 LGALS2P05162 132 aa17.6■□□□□ 0.41
VTI1A-203ENST00000472892 HOXC8P31273 242 aa17.6■□□□□ 0.41
Retrieved 100 of 20,778 RNA–protein pairs in 14.9 ms