RNA–Protein interactions for RNA: ENST00000472815.5

HIF3A-206, Transcript of hypoxia inducible factor 3 subunit alpha, humanhuman

TSL 2 BASIC

Gene HIF3A, Length 1,709 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HIF3A-206ENST00000472815 LRCH2Q5VUJ6 765 aa16.39■□□□□ 0.21
HIF3A-206ENST00000472815 LARP4BQ92615 738 aaKnown RBP16.39■□□□□ 0.21
HIF3A-206ENST00000472815 ASCC2Q9H1I8 757 aaPredicted RBP16.39■□□□□ 0.21
HIF3A-206ENST00000472815 GAS7O60861 476 aa16.39■□□□□ 0.21
HIF3A-206ENST00000472815 CELF2O95319 508 aaKnown RBP16.39■□□□□ 0.21
HIF3A-206ENST00000472815 CCND2P30279 289 aa16.39■□□□□ 0.21
HIF3A-206ENST00000472815 GTF2A2P52657 109 aa16.39■□□□□ 0.21
HIF3A-206ENST00000472815 HERVK_113P62684 666 aa16.39■□□□□ 0.21
HIF3A-206ENST00000472815 UBXN2AP68543 259 aa16.39■□□□□ 0.21
HIF3A-206ENST00000472815 FMR1Q06787 632 aaKnown RBP eCLIP16.39■□□□□ 0.21
HIF3A-206ENST00000472815 GRB10Q13322 594 aa16.39■□□□□ 0.21
HIF3A-206ENST00000472815 BAATQ14032 418 aaPredicted RBP16.39■□□□□ 0.21
HIF3A-206ENST00000472815 ISM2Q6H9L7 571 aa16.39■□□□□ 0.21
HIF3A-206ENST00000472815 NCAPH2Q6IBW4 605 aa16.39■□□□□ 0.21
HIF3A-206ENST00000472815 SLC30A10Q6XR72 485 aa16.39■□□□□ 0.21
HIF3A-206ENST00000472815 RIOX2Q8IUF8 465 aa16.39■□□□□ 0.21
HIF3A-206ENST00000472815 AOPEPQ8N6M6 819 aa16.39■□□□□ 0.21
HIF3A-206ENST00000472815 NSUN6Q8TEA1 469 aaKnown RBP16.39■□□□□ 0.21
HIF3A-206ENST00000472815 SLC5A5Q92911 643 aa16.39■□□□□ 0.21
HIF3A-206ENST00000472815 PPP1R9BQ96SB3 815 aa16.39■□□□□ 0.21
HIF3A-206ENST00000472815 PLIN2Q99541 437 aa16.39■□□□□ 0.21
HIF3A-206ENST00000472815 ZNF577Q9BSK1 485 aa16.39■□□□□ 0.21
HIF3A-206ENST00000472815 PXMP2Q9NR77 195 aa16.39■□□□□ 0.21
HIF3A-206ENST00000472815 COL20A1Q9P218 1284 aa16.39■□□□□ 0.21
HIF3A-206ENST00000472815 RIPK3Q9Y572 518 aa16.39■□□□□ 0.21
HIF3A-206ENST00000472815 STAM2O75886 525 aa16.38■□□□□ 0.21
HIF3A-206ENST00000472815 SLC25A27O95847 323 aa16.38■□□□□ 0.21
HIF3A-206ENST00000472815 RPN1P04843 607 aaKnown RBP16.38■□□□□ 0.21
HIF3A-206ENST00000472815 CETPP11597 493 aa16.38■□□□□ 0.21
HIF3A-206ENST00000472815 KCNB1Q14721 858 aa16.38■□□□□ 0.21
HIF3A-206ENST00000472815 PGM5Q15124 567 aa16.38■□□□□ 0.21
HIF3A-206ENST00000472815 TMEM119Q4V9L6 283 aa16.38■□□□□ 0.21
HIF3A-206ENST00000472815 TRIM44Q96DX7 344 aaPredicted RBP16.38■□□□□ 0.21
HIF3A-206ENST00000472815 RIT2Q99578 217 aa16.38■□□□□ 0.21
HIF3A-206ENST00000472815 TEKT3Q9BXF9 490 aa16.38■□□□□ 0.21
HIF3A-206ENST00000472815 BMP2KQ9NSY1 1161 aaPredicted RBP16.38■□□□□ 0.21
HIF3A-206ENST00000472815 TCEAL9Q9UHQ7 104 aa16.38■□□□□ 0.21
HIF3A-206ENST00000472815 EIF2AK2P19525 551 aaKnown RBP16.37■□□□□ 0.21
HIF3A-206ENST00000472815 MUTP22033 750 aa16.37■□□□□ 0.21
HIF3A-206ENST00000472815 RPA1P27694 616 aa16.37■□□□□ 0.21
HIF3A-206ENST00000472815 ERCC5P28715 1186 aaPredicted RBP16.37■□□□□ 0.21
HIF3A-206ENST00000472815 MYL5Q02045 173 aa16.37■□□□□ 0.21
HIF3A-206ENST00000472815 PPP2R5CQ13362 524 aa16.37■□□□□ 0.21
HIF3A-206ENST00000472815 CUL4BQ13620 913 aa16.37■□□□□ 0.21
HIF3A-206ENST00000472815 DHX40Q8IX18 779 aaKnown RBP16.37■□□□□ 0.21
HIF3A-206ENST00000472815 CYP2W1Q8TAV3 490 aa16.37■□□□□ 0.21
HIF3A-206ENST00000472815 RAD54LQ92698 747 aa16.37■□□□□ 0.21
HIF3A-206ENST00000472815 STAMQ92783 540 aa16.37■□□□□ 0.21
HIF3A-206ENST00000472815 TAAR1Q96RJ0 339 aa16.37■□□□□ 0.21
HIF3A-206ENST00000472815 C7orf25Q9BPX7 421 aa16.37■□□□□ 0.21
HIF3A-206ENST00000472815 PDCD2LQ9BRP1 358 aa16.37■□□□□ 0.21
HIF3A-206ENST00000472815 SPATC1LQ9H0A9 340 aa16.37■□□□□ 0.21
HIF3A-206ENST00000472815 CYP39A1Q9NYL5 469 aa16.37■□□□□ 0.21
HIF3A-206ENST00000472815 SLC45A1Q9Y2W3 748 aa16.37■□□□□ 0.21
HIF3A-206ENST00000472815 A0A087WWV3 80 aa16.36■□□□□ 0.21
HIF3A-206ENST00000472815 B4DLN1 442 aa16.36■□□□□ 0.21
HIF3A-206ENST00000472815 IPO5O00410 1097 aaKnown RBP16.36■□□□□ 0.21
HIF3A-206ENST00000472815 MAFGO15525 162 aa16.36■□□□□ 0.21
HIF3A-206ENST00000472815 PSMD10O75832 226 aa16.36■□□□□ 0.21
HIF3A-206ENST00000472815 PPP1R2P41236 205 aa16.36■□□□□ 0.21
HIF3A-206ENST00000472815 SPIRE1Q08AE8 756 aa16.36■□□□□ 0.21
HIF3A-206ENST00000472815 STIM1Q13586 685 aa16.36■□□□□ 0.21
HIF3A-206ENST00000472815 MTMR1Q13613 665 aa16.36■□□□□ 0.21
HIF3A-206ENST00000472815 NLRX1Q86UT6 975 aa16.36■□□□□ 0.21
HIF3A-206ENST00000472815 ANKRD35Q8N283 1001 aa16.36■□□□□ 0.21
HIF3A-206ENST00000472815 DNERQ8NFT8 737 aa16.36■□□□□ 0.21
HIF3A-206ENST00000472815 CDHR1Q96JP9 859 aa16.36■□□□□ 0.21
HIF3A-206ENST00000472815 PDLIM2Q96JY6 352 aa16.36■□□□□ 0.21
HIF3A-206ENST00000472815 PNMA5Q96PV4 448 aa16.36■□□□□ 0.21
HIF3A-206ENST00000472815 MPHOSPH6Q99547 160 aaKnown RBP16.36■□□□□ 0.21
HIF3A-206ENST00000472815 BLZF1Q9H2G9 400 aa16.36■□□□□ 0.21
HIF3A-206ENST00000472815 JADE2Q9NQC1 790 aa16.36■□□□□ 0.21
HIF3A-206ENST00000472815 TBC1D22BQ9NU19 505 aa16.36■□□□□ 0.21
HIF3A-206ENST00000472815 UBIAD1Q9Y5Z9 338 aa16.36■□□□□ 0.21
HIF3A-206ENST00000472815 LOXHD1Q8IVV2 1947 aa16.36■□□□□ 0.21
HIF3A-206ENST00000472815 ZBTB48P10074 688 aaPredicted RBP16.36■□□□□ 0.21
HIF3A-206ENST00000472815 MYCLP12524 364 aaPredicted RBP16.36■□□□□ 0.21
HIF3A-206ENST00000472815 ZNF658Q5TYW1 1059 aaPredicted RBP16.36■□□□□ 0.21
HIF3A-206ENST00000472815 CST9Q5W186 159 aa16.36■□□□□ 0.21
HIF3A-206ENST00000472815 GJA10Q969M2 543 aa16.36■□□□□ 0.21
HIF3A-206ENST00000472815 IWS1Q96ST2 819 aa16.36■□□□□ 0.21
HIF3A-206ENST00000472815 MTRQ99707 1265 aa16.36■□□□□ 0.21
HIF3A-206ENST00000472815 PAGR1Q9BTK6 254 aa16.36■□□□□ 0.21
HIF3A-206ENST00000472815 POLR3CQ9BUI4 534 aaPredicted RBP16.36■□□□□ 0.21
HIF3A-206ENST00000472815 TRIM9Q9C026 710 aa16.36■□□□□ 0.21
HIF3A-206ENST00000472815 A1CFQ9NQ94 594 aaKnown RBP16.36■□□□□ 0.21
HIF3A-206ENST00000472815 VAV3Q9UKW4 847 aa16.36■□□□□ 0.21
HIF3A-206ENST00000472815 ADCY5O95622 1261 aa16.35■□□□□ 0.21
HIF3A-206ENST00000472815 ASIC1P78348 528 aa16.35■□□□□ 0.21
HIF3A-206ENST00000472815 SARM1Q6SZW1 724 aa16.35■□□□□ 0.21
HIF3A-206ENST00000472815 OTOP1Q7RTM1 612 aa16.35■□□□□ 0.21
HIF3A-206ENST00000472815 NEK9Q8TD19 979 aa16.35■□□□□ 0.21
HIF3A-206ENST00000472815 TUFT1Q9NNX1 390 aa16.35■□□□□ 0.21
HIF3A-206ENST00000472815 KCNH7Q9NS40 1196 aa16.35■□□□□ 0.21
HIF3A-206ENST00000472815 BLOC1S4Q9NUP1 217 aa16.35■□□□□ 0.21
HIF3A-206ENST00000472815 EXOC1Q9NV70 894 aa16.35■□□□□ 0.21
HIF3A-206ENST00000472815 ADD3Q9UEY8 706 aaKnown RBP16.35■□□□□ 0.21
HIF3A-206ENST00000472815 KIAA1024Q9UPX6 916 aa16.35■□□□□ 0.21
HIF3A-206ENST00000472815 DNM3Q9UQ16 869 aa16.35■□□□□ 0.21
HIF3A-206ENST00000472815 RHOBTB3O94955 611 aa16.34■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 39.7 ms