RNA–Protein interactions for RNA: ENST00000472789.1

SMARCD3-208, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily d, member 3, humanhuman

TSL 2

Gene SMARCD3, Length 863 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCD3-208ENST00000472789 SMPD1P17405 629 aa12.02□□□□□ -0.49
SMARCD3-208ENST00000472789 PTGS1P23219 599 aa12.02□□□□□ -0.49
SMARCD3-208ENST00000472789 ZNF76P36508 570 aa12.02□□□□□ -0.49
SMARCD3-208ENST00000472789 KRT85P78386 507 aa12.02□□□□□ -0.49
SMARCD3-208ENST00000472789 TTLL4Q14679 1199 aa12.02□□□□□ -0.49
SMARCD3-208ENST00000472789 GNPTABQ3T906 1256 aa12.02□□□□□ -0.49
SMARCD3-208ENST00000472789 TLK2Q86UE8 772 aa12.02□□□□□ -0.49
SMARCD3-208ENST00000472789 TEX2Q8IWB9 1127 aa12.02□□□□□ -0.49
SMARCD3-208ENST00000472789 BLIDQ8IZY5 108 aa12.02□□□□□ -0.49
SMARCD3-208ENST00000472789 GJB4Q9NTQ9 266 aa12.02□□□□□ -0.49
SMARCD3-208ENST00000472789 OGDHLQ9ULD0 1010 aa12.02□□□□□ -0.49
SMARCD3-208ENST00000472789 PCDHA4Q9UN74 947 aa12.02□□□□□ -0.49
SMARCD3-208ENST00000472789 DNAH12Q6ZR08 3092 aa12.02□□□□□ -0.49
SMARCD3-208ENST00000472789 ADAMTS3O15072 1205 aa12.01□□□□□ -0.49
SMARCD3-208ENST00000472789 ADCY6O43306 1168 aa12.01□□□□□ -0.49
SMARCD3-208ENST00000472789 BAG4O95429 457 aaKnown RBP12.01□□□□□ -0.49
SMARCD3-208ENST00000472789 NCLP19338 710 aaKnown RBP12.01□□□□□ -0.49
SMARCD3-208ENST00000472789 KRT2P35908 639 aa12.01□□□□□ -0.49
SMARCD3-208ENST00000472789 GUCY1B3Q02153 619 aa12.01□□□□□ -0.49
SMARCD3-208ENST00000472789 LRRC41Q15345 812 aa12.01□□□□□ -0.49
SMARCD3-208ENST00000472789 DUSP28Q4G0W2 176 aa12.01□□□□□ -0.49
SMARCD3-208ENST00000472789 TMEM63BQ5T3F8 832 aa12.01□□□□□ -0.49
SMARCD3-208ENST00000472789 PCNX4Q63HM2 1172 aa12.01□□□□□ -0.49
SMARCD3-208ENST00000472789 MCTP2Q6DN12 878 aa12.01□□□□□ -0.49
SMARCD3-208ENST00000472789 XRRA1Q6P2D8 792 aa12.01□□□□□ -0.49
SMARCD3-208ENST00000472789 UBE2Q1Q7Z7E8 422 aa12.01□□□□□ -0.49
SMARCD3-208ENST00000472789 RNF180Q86T96 592 aa12.01□□□□□ -0.49
SMARCD3-208ENST00000472789 DIS3LQ8TF46 1054 aaKnown RBP12.01□□□□□ -0.49
SMARCD3-208ENST00000472789 COPS5Q92905 334 aa12.01□□□□□ -0.49
SMARCD3-208ENST00000472789 PAWRQ96IZ0 340 aaKnown RBP12.01□□□□□ -0.49
SMARCD3-208ENST00000472789 SCAND2PQ9GZW5 306 aaPredicted RBP12.01□□□□□ -0.49
SMARCD3-208ENST00000472789 PRO3102Q9H379 93 aa12.01□□□□□ -0.49
SMARCD3-208ENST00000472789 SYNRGQ9UMZ2 1314 aa12.01□□□□□ -0.49
SMARCD3-208ENST00000472789 ARIH2O95376 493 aa12□□□□□ -0.49
SMARCD3-208ENST00000472789 U2AF2P26368 475 aaKnown RBP eCLIP12□□□□□ -0.49
SMARCD3-208ENST00000472789 CLK2P49760 499 aaKnown RBP12□□□□□ -0.49
SMARCD3-208ENST00000472789 MRPS9P82933 396 aaKnown RBP12□□□□□ -0.49
SMARCD3-208ENST00000472789 ARHGAP4P98171 946 aa12□□□□□ -0.49
SMARCD3-208ENST00000472789 BEX3Q00994 111 aa12□□□□□ -0.49
SMARCD3-208ENST00000472789 LY6KQ17RY6 165 aa12□□□□□ -0.49
SMARCD3-208ENST00000472789 GNASQ5JWF2 1037 aa12□□□□□ -0.49
SMARCD3-208ENST00000472789 NLRX1Q86UT6 975 aa12□□□□□ -0.49
SMARCD3-208ENST00000472789 FERMT3Q86UX7 667 aa12□□□□□ -0.49
SMARCD3-208ENST00000472789 DIS3L2Q8IYB7 885 aaKnown RBP12□□□□□ -0.49
SMARCD3-208ENST00000472789 OR6J1Q8NGC5 347 aa12□□□□□ -0.49
SMARCD3-208ENST00000472789 FERMT2Q96AC1 680 aa12□□□□□ -0.49
SMARCD3-208ENST00000472789 VTI1AQ96AJ9 217 aa12□□□□□ -0.49
SMARCD3-208ENST00000472789 PHF20Q9BVI0 1012 aa12□□□□□ -0.49
SMARCD3-208ENST00000472789 PKD2L1Q9P0L9 805 aa12□□□□□ -0.49
SMARCD3-208ENST00000472789 NOL7Q9UMY1 257 aaKnown RBP12□□□□□ -0.49
SMARCD3-208ENST00000472789 FRMPD4Q14CM0 1322 aa12□□□□□ -0.49
SMARCD3-208ENST00000472789 CCDC194A0A1B0GVG4 234 aa11.99□□□□□ -0.49
SMARCD3-208ENST00000472789 RBM47A0AV96 593 aaKnown RBP11.99□□□□□ -0.49
SMARCD3-208ENST00000472789 MYADML2A6NDP7 307 aa11.99□□□□□ -0.49
SMARCD3-208ENST00000472789 DNM1LO00429 736 aa11.99□□□□□ -0.49
SMARCD3-208ENST00000472789 NKRFO15226 690 aaKnown RBP eCLIP11.99□□□□□ -0.49
SMARCD3-208ENST00000472789 ZEB2O60315 1214 aa11.99□□□□□ -0.49
SMARCD3-208ENST00000472789 STAM2O75886 525 aa11.99□□□□□ -0.49
SMARCD3-208ENST00000472789 GH1P01241 217 aa11.99□□□□□ -0.49
SMARCD3-208ENST00000472789 CAPN2P17655 700 aa11.99□□□□□ -0.49
SMARCD3-208ENST00000472789 MCM4P33991 863 aa11.99□□□□□ -0.49
SMARCD3-208ENST00000472789 SREBF1P36956 1147 aa11.99□□□□□ -0.49
SMARCD3-208ENST00000472789 IRX5P78411 483 aaPredicted RBP11.99□□□□□ -0.49
SMARCD3-208ENST00000472789 RESTQ13127 1097 aa11.99□□□□□ -0.49
SMARCD3-208ENST00000472789 FSCN1Q16658 493 aaKnown RBP11.99□□□□□ -0.49
SMARCD3-208ENST00000472789 BRDTQ58F21 947 aaPredicted RBP11.99□□□□□ -0.49
SMARCD3-208ENST00000472789 RILPL1Q5EBL4 403 aa11.99□□□□□ -0.49
SMARCD3-208ENST00000472789 KCNV1Q6PIU1 500 aa11.99□□□□□ -0.49
SMARCD3-208ENST00000472789 KRT25Q7Z3Z0 450 aa11.99□□□□□ -0.49
SMARCD3-208ENST00000472789 NECAB2Q7Z6G3 386 aa11.99□□□□□ -0.49
SMARCD3-208ENST00000472789 NOSTRINQ8IVI9 506 aa11.99□□□□□ -0.49
SMARCD3-208ENST00000472789 DHX37Q8IY37 1157 aaKnown RBP11.99□□□□□ -0.49
SMARCD3-208ENST00000472789 ANKLE1Q8NAG6 615 aa11.99□□□□□ -0.49
SMARCD3-208ENST00000472789 DPF3Q92784 378 aa11.99□□□□□ -0.49
SMARCD3-208ENST00000472789 SENP6Q9GZR1 1112 aaPredicted RBP11.99□□□□□ -0.49
SMARCD3-208ENST00000472789 C11orf49Q9H6J7 331 aa11.99□□□□□ -0.49
SMARCD3-208ENST00000472789 GNEQ9Y223 722 aaKnown RBP11.99□□□□□ -0.49
SMARCD3-208ENST00000472789 LRRC37A2A6NM11 1700 aa11.99□□□□□ -0.49
SMARCD3-208ENST00000472789 EYSQ5T1H1 3165 aa11.99□□□□□ -0.49
SMARCD3-208ENST00000472789 VCANP13611 3396 aa11.99□□□□□ -0.49
SMARCD3-208ENST00000472789 FIBPO43427 364 aa11.98□□□□□ -0.49
SMARCD3-208ENST00000472789 ADAMTS4O75173 837 aa11.98□□□□□ -0.49
SMARCD3-208ENST00000472789 RGS20O76081 388 aa11.98□□□□□ -0.49
SMARCD3-208ENST00000472789 GGPS1O95749 300 aa11.98□□□□□ -0.49
SMARCD3-208ENST00000472789 MYL3P08590 195 aa11.98□□□□□ -0.49
SMARCD3-208ENST00000472789 GJA9P57773 515 aa11.98□□□□□ -0.49
SMARCD3-208ENST00000472789 SP4Q02446 784 aa11.98□□□□□ -0.49
SMARCD3-208ENST00000472789 MTMR1Q13613 665 aa11.98□□□□□ -0.49
SMARCD3-208ENST00000472789 NONOQ15233 471 aaKnown RBP eCLIP11.98□□□□□ -0.49
SMARCD3-208ENST00000472789 NFKBIBQ15653 356 aa11.98□□□□□ -0.49
SMARCD3-208ENST00000472789 KCNA10Q16322 511 aa11.98□□□□□ -0.49
SMARCD3-208ENST00000472789 SKOR2Q2VWA4 1001 aaPredicted RBP11.98□□□□□ -0.49
SMARCD3-208ENST00000472789 CCDC62Q6P9F0 684 aa11.98□□□□□ -0.49
SMARCD3-208ENST00000472789 PCSK9Q8NBP7 692 aaKnown RBP11.98□□□□□ -0.49
SMARCD3-208ENST00000472789 DAGLBQ8NCG7 672 aa11.98□□□□□ -0.49
SMARCD3-208ENST00000472789 OXER1Q8TDS5 423 aa11.98□□□□□ -0.49
SMARCD3-208ENST00000472789 INPP4AQ96PE3 977 aaPredicted RBP11.98□□□□□ -0.49
SMARCD3-208ENST00000472789 MXRA8Q9BRK3 442 aa11.98□□□□□ -0.49
SMARCD3-208ENST00000472789 UPF3AQ9H1J1 476 aaKnown RBP11.98□□□□□ -0.49
SMARCD3-208ENST00000472789 MLXIPQ9HAP2 919 aa11.98□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 39.8 ms