RNA–Protein interactions for RNA: ENST00000472479.1

UBE2F-220, Transcript of ubiquitin conjugating enzyme E2 F (putative), humanhuman

TSL 2

Gene UBE2F, Length 1,458 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2F-220ENST00000472479 SCFD2Q8WU76 684 aa11.91□□□□□ -0.5
UBE2F-220ENST00000472479 GPRASP2Q96D09 838 aa11.91□□□□□ -0.5
UBE2F-220ENST00000472479 FTOQ9C0B1 505 aaKnown RBP eCLIP11.91□□□□□ -0.5
UBE2F-220ENST00000472479 MLXIPQ9HAP2 919 aa11.91□□□□□ -0.5
UBE2F-220ENST00000472479 VTA1Q9NP79 307 aa11.91□□□□□ -0.5
UBE2F-220ENST00000472479 EIF4ENIF1Q9NRA8 985 aaKnown RBP11.91□□□□□ -0.5
UBE2F-220ENST00000472479 UBIAD1Q9Y5Z9 338 aa11.91□□□□□ -0.5
UBE2F-220ENST00000472479 SYNGAP1Q96PV0 1343 aa11.91□□□□□ -0.5
UBE2F-220ENST00000472479 CYP3A7-CYP3A51PA0A087WV96 503 aa11.9□□□□□ -0.5
UBE2F-220ENST00000472479 MEIS1O00470 390 aa11.9□□□□□ -0.5
UBE2F-220ENST00000472479 SPTLC2O15270 562 aa11.9□□□□□ -0.5
UBE2F-220ENST00000472479 GAS7O60861 476 aa11.9□□□□□ -0.5
UBE2F-220ENST00000472479 OR52Z1P0C646 297 aa11.9□□□□□ -0.5
UBE2F-220ENST00000472479 ARP10275 920 aa11.9□□□□□ -0.5
UBE2F-220ENST00000472479 TXNP10599 105 aaKnown RBP11.9□□□□□ -0.5
UBE2F-220ENST00000472479 ITGB5P18084 799 aa11.9□□□□□ -0.5
UBE2F-220ENST00000472479 CYP3A7P24462 503 aa11.9□□□□□ -0.5
UBE2F-220ENST00000472479 EDNRBP24530 442 aa11.9□□□□□ -0.5
UBE2F-220ENST00000472479 MARCKSP29966 332 aaPredicted RBP11.9□□□□□ -0.5
UBE2F-220ENST00000472479 FRMPD4Q14CM0 1322 aa11.9□□□□□ -0.5
UBE2F-220ENST00000472479 Q4G0T1 1027 aa11.9□□□□□ -0.5
UBE2F-220ENST00000472479 LRCH2Q5VUJ6 765 aa11.9□□□□□ -0.5
UBE2F-220ENST00000472479 MAMDC4Q6UXC1 1216 aa11.9□□□□□ -0.5
UBE2F-220ENST00000472479 NIPA1Q7RTP0 329 aa11.9□□□□□ -0.5
UBE2F-220ENST00000472479 CTU1Q7Z7A3 348 aaKnown RBP11.9□□□□□ -0.5
UBE2F-220ENST00000472479 SLFN12Q8IYM2 578 aa11.9□□□□□ -0.5
UBE2F-220ENST00000472479 SLAIN1Q8ND83 568 aa11.9□□□□□ -0.5
UBE2F-220ENST00000472479 FGD4Q96M96 766 aa11.9□□□□□ -0.5
UBE2F-220ENST00000472479 FAM20AQ96MK3 541 aa11.9□□□□□ -0.5
UBE2F-220ENST00000472479 TEKT3Q9BXF9 490 aa11.9□□□□□ -0.5
UBE2F-220ENST00000472479 RAB34Q9BZG1 259 aa11.9□□□□□ -0.5
UBE2F-220ENST00000472479 KCNH7Q9NS40 1196 aa11.9□□□□□ -0.5
UBE2F-220ENST00000472479 FLRT1Q9NZU1 646 aa11.9□□□□□ -0.5
UBE2F-220ENST00000472479 FAM184BQ9ULE4 1060 aa11.9□□□□□ -0.5
UBE2F-220ENST00000472479 PCDHA12Q9UN75 941 aa11.9□□□□□ -0.5
UBE2F-220ENST00000472479 SAMM50Q9Y512 469 aa11.9□□□□□ -0.5
UBE2F-220ENST00000472479 PTCH2Q9Y6C5 1203 aa11.9□□□□□ -0.5
UBE2F-220ENST00000472479 ASTN1O14525 1302 aa11.89□□□□□ -0.51
UBE2F-220ENST00000472479 IPO5O00410 1097 aaKnown RBP11.89□□□□□ -0.51
UBE2F-220ENST00000472479 LAD1O00515 517 aa11.89□□□□□ -0.51
UBE2F-220ENST00000472479 MSH4O15457 936 aa11.89□□□□□ -0.51
UBE2F-220ENST00000472479 SLC37A4O43826 429 aa11.89□□□□□ -0.51
UBE2F-220ENST00000472479 YEATS4O95619 227 aa11.89□□□□□ -0.51
UBE2F-220ENST00000472479 SNAI1O95863 264 aaPredicted RBP11.89□□□□□ -0.51
UBE2F-220ENST00000472479 MYCP01106 439 aaPredicted RBP11.89□□□□□ -0.51
UBE2F-220ENST00000472479 HMGCRP04035 888 aa11.89□□□□□ -0.51
UBE2F-220ENST00000472479 TGFB3P10600 412 aa11.89□□□□□ -0.51
UBE2F-220ENST00000472479 GRK4P32298 578 aa11.89□□□□□ -0.51
UBE2F-220ENST00000472479 SP4Q02446 784 aa11.89□□□□□ -0.51
UBE2F-220ENST00000472479 TNFAIP2Q03169 654 aa11.89□□□□□ -0.51
UBE2F-220ENST00000472479 NEDD9Q14511 834 aa11.89□□□□□ -0.51
UBE2F-220ENST00000472479 SLC9C1Q4G0N8 1177 aa11.89□□□□□ -0.51
UBE2F-220ENST00000472479 IQSEC1Q6DN90 963 aa11.89□□□□□ -0.51
UBE2F-220ENST00000472479 DHX37Q8IY37 1157 aaKnown RBP11.89□□□□□ -0.51
UBE2F-220ENST00000472479 GIMAP8Q8ND71 665 aaPredicted RBP11.89□□□□□ -0.51
UBE2F-220ENST00000472479 RASSF8Q8NHQ8 419 aa11.89□□□□□ -0.51
UBE2F-220ENST00000472479 KCNG4Q8TDN1 519 aa11.89□□□□□ -0.51
UBE2F-220ENST00000472479 TRIB2Q92519 343 aa11.89□□□□□ -0.51
UBE2F-220ENST00000472479 CHAMP1Q96JM3 812 aa11.89□□□□□ -0.51
UBE2F-220ENST00000472479 GDPD2Q9HCC8 539 aa11.89□□□□□ -0.51
UBE2F-220ENST00000472479 PDGFCQ9NRA1 345 aa11.89□□□□□ -0.51
UBE2F-220ENST00000472479 TBC1D22BQ9NU19 505 aa11.89□□□□□ -0.51
UBE2F-220ENST00000472479 POLR3EQ9NVU0 708 aa11.89□□□□□ -0.51
UBE2F-220ENST00000472479 PTPN22Q9Y2R2 807 aa11.89□□□□□ -0.51
UBE2F-220ENST00000472479 PLXNB2O15031 1838 aa11.89□□□□□ -0.51
UBE2F-220ENST00000472479 VWA3AA6NCI4 1184 aa11.89□□□□□ -0.51
UBE2F-220ENST00000472479 SPATA31C2B4DYI2 1134 aa11.89□□□□□ -0.51
UBE2F-220ENST00000472479 WNT7AO00755 349 aa11.89□□□□□ -0.51
UBE2F-220ENST00000472479 CHMP2AO43633 222 aa11.89□□□□□ -0.51
UBE2F-220ENST00000472479 ADCYAP1R1P41586 468 aa11.89□□□□□ -0.51
UBE2F-220ENST00000472479 TECP42680 631 aa11.89□□□□□ -0.51
UBE2F-220ENST00000472479 CAP1Q01518 475 aa11.89□□□□□ -0.51
UBE2F-220ENST00000472479 SLC39A14Q15043 492 aa11.89□□□□□ -0.51
UBE2F-220ENST00000472479 LY6KQ17RY6 165 aa11.89□□□□□ -0.51
UBE2F-220ENST00000472479 CCDC144BQ3MJ40 725 aa11.89□□□□□ -0.51
UBE2F-220ENST00000472479 MORC4Q8TE76 937 aa11.89□□□□□ -0.51
UBE2F-220ENST00000472479 PXYLP1Q8TE99 480 aa11.89□□□□□ -0.51
UBE2F-220ENST00000472479 CRYGNQ8WXF5 182 aa11.89□□□□□ -0.51
UBE2F-220ENST00000472479 INPP4AQ96PE3 977 aaPredicted RBP11.89□□□□□ -0.51
UBE2F-220ENST00000472479 AP5M1Q9H0R1 490 aa11.89□□□□□ -0.51
UBE2F-220ENST00000472479 TMEM60Q9H2L4 133 aa11.89□□□□□ -0.51
UBE2F-220ENST00000472479 TTC12Q9H892 705 aaPredicted RBP11.89□□□□□ -0.51
UBE2F-220ENST00000472479 SPC25Q9HBM1 224 aa11.89□□□□□ -0.51
UBE2F-220ENST00000472479 AGO4Q9HCK5 861 aaKnown RBP11.89□□□□□ -0.51
UBE2F-220ENST00000472479 IGLV3-22A0A075B6J6 115 aa11.88□□□□□ -0.51
UBE2F-220ENST00000472479 NOP56O00567 594 aaKnown RBP11.88□□□□□ -0.51
UBE2F-220ENST00000472479 TBX3O15119 743 aa11.88□□□□□ -0.51
UBE2F-220ENST00000472479 GGPS1O95749 300 aa11.88□□□□□ -0.51
UBE2F-220ENST00000472479 PRKAR2AP13861 404 aaKnown RBP11.88□□□□□ -0.51
UBE2F-220ENST00000472479 ICAM3P32942 547 aa11.88□□□□□ -0.51
UBE2F-220ENST00000472479 NASPP49321 788 aaPredicted RBP11.88□□□□□ -0.51
UBE2F-220ENST00000472479 ZRSR1Q15695 479 aaKnown RBP11.88□□□□□ -0.51
UBE2F-220ENST00000472479 NCAPH2Q6IBW4 605 aa11.88□□□□□ -0.51
UBE2F-220ENST00000472479 CYFIP1Q7L576 1253 aa11.88□□□□□ -0.51
UBE2F-220ENST00000472479 KRI1Q8N9T8 703 aaKnown RBP11.88□□□□□ -0.51
UBE2F-220ENST00000472479 LINC00301Q8NCQ3 95 aa11.88□□□□□ -0.51
UBE2F-220ENST00000472479 SH3TC2Q8TF17 1288 aa11.88□□□□□ -0.51
UBE2F-220ENST00000472479 LEO1Q8WVC0 666 aaPredicted RBP11.88□□□□□ -0.51
UBE2F-220ENST00000472479 GJA10Q969M2 543 aa11.88□□□□□ -0.51
UBE2F-220ENST00000472479 FERMT2Q96AC1 680 aa11.88□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 14.1 ms