RNA–Protein interactions for RNA: ENST00000472066.1

PRKCB-205, Transcript of protein kinase C beta, humanhuman

TSL 3

Gene PRKCB, Length 556 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKCB-205ENST00000472066 SP2Q02086 613 aa14.03□□□□□ -0.16
PRKCB-205ENST00000472066 SEMA3FQ13275 785 aa14.03□□□□□ -0.16
PRKCB-205ENST00000472066 MTMR1Q13613 665 aa14.03□□□□□ -0.16
PRKCB-205ENST00000472066 INF2Q27J81 1249 aa14.03□□□□□ -0.16
PRKCB-205ENST00000472066 IFFO2Q5TF58 517 aa14.03□□□□□ -0.16
PRKCB-205ENST00000472066 NIPA1Q7RTP0 329 aa14.03□□□□□ -0.16
PRKCB-205ENST00000472066 ARRDC4Q8NCT1 418 aa14.03□□□□□ -0.16
PRKCB-205ENST00000472066 COPS5Q92905 334 aa14.03□□□□□ -0.16
PRKCB-205ENST00000472066 CDHR1Q96JP9 859 aa14.03□□□□□ -0.16
PRKCB-205ENST00000472066 AP5M1Q9H0R1 490 aa14.03□□□□□ -0.16
PRKCB-205ENST00000472066 UPF3AQ9H1J1 476 aaKnown RBP14.03□□□□□ -0.16
PRKCB-205ENST00000472066 SYNRGQ9UMZ2 1314 aa14.03□□□□□ -0.16
PRKCB-205ENST00000472066 IGLV3-22A0A075B6J6 115 aa14.02□□□□□ -0.17
PRKCB-205ENST00000472066 CYP3A7-CYP3A51PA0A087WV96 503 aa14.02□□□□□ -0.17
PRKCB-205ENST00000472066 FAM205CA6NFA0 338 aa14.02□□□□□ -0.17
PRKCB-205ENST00000472066 ADAMTS4O75173 837 aa14.02□□□□□ -0.17
PRKCB-205ENST00000472066 GH1P01241 217 aa14.02□□□□□ -0.17
PRKCB-205ENST00000472066 ARP10275 920 aa14.02□□□□□ -0.17
PRKCB-205ENST00000472066 PDCP20941 246 aa14.02□□□□□ -0.17
PRKCB-205ENST00000472066 CYP3A7P24462 503 aa14.02□□□□□ -0.17
PRKCB-205ENST00000472066 U2AF2P26368 475 aaKnown RBP eCLIP14.02□□□□□ -0.17
PRKCB-205ENST00000472066 NKX3-2P78367 333 aa14.02□□□□□ -0.17
PRKCB-205ENST00000472066 BECN1Q14457 450 aa14.02□□□□□ -0.17
PRKCB-205ENST00000472066 LRRC41Q15345 812 aa14.02□□□□□ -0.17
PRKCB-205ENST00000472066 NEK8Q86SG6 692 aa14.02□□□□□ -0.17
PRKCB-205ENST00000472066 TLK2Q86UE8 772 aa14.02□□□□□ -0.17
PRKCB-205ENST00000472066 DHX37Q8IY37 1157 aaKnown RBP14.02□□□□□ -0.17
PRKCB-205ENST00000472066 SPC25Q9HBM1 224 aa14.02□□□□□ -0.17
PRKCB-205ENST00000472066 KCNH7Q9NS40 1196 aa14.02□□□□□ -0.17
PRKCB-205ENST00000472066 KIF28PB7ZC32 967 aa14.01□□□□□ -0.17
PRKCB-205ENST00000472066 CTAGE5O15320 804 aa14.01□□□□□ -0.17
PRKCB-205ENST00000472066 ATP9AO75110 1047 aa14.01□□□□□ -0.17
PRKCB-205ENST00000472066 MYCNP04198 464 aaPredicted RBP14.01□□□□□ -0.17
PRKCB-205ENST00000472066 SYT1P21579 422 aa14.01□□□□□ -0.17
PRKCB-205ENST00000472066 UBA1P22314 1058 aaKnown RBP14.01□□□□□ -0.17
PRKCB-205ENST00000472066 MNX1P50219 401 aaPredicted RBP14.01□□□□□ -0.17
PRKCB-205ENST00000472066 IRX5P78411 483 aaPredicted RBP14.01□□□□□ -0.17
PRKCB-205ENST00000472066 ARHGAP1Q07960 439 aa14.01□□□□□ -0.17
PRKCB-205ENST00000472066 GNL2Q13823 731 aaKnown RBP14.01□□□□□ -0.17
PRKCB-205ENST00000472066 NEDD9Q14511 834 aa14.01□□□□□ -0.17
PRKCB-205ENST00000472066 LETM2Q2VYF4 491 aa14.01□□□□□ -0.17
PRKCB-205ENST00000472066 PRR16Q569H4 304 aa14.01□□□□□ -0.17
PRKCB-205ENST00000472066 CELF3Q5SZQ8 465 aaKnown RBP14.01□□□□□ -0.17
PRKCB-205ENST00000472066 RNF180Q86T96 592 aa14.01□□□□□ -0.17
PRKCB-205ENST00000472066 PLA2G4DQ86XP0 818 aa14.01□□□□□ -0.17
PRKCB-205ENST00000472066 NOSTRINQ8IVI9 506 aa14.01□□□□□ -0.17
PRKCB-205ENST00000472066 ANKLE1Q8NAG6 615 aa14.01□□□□□ -0.17
PRKCB-205ENST00000472066 SPRYD3Q8NCJ5 442 aa14.01□□□□□ -0.17
PRKCB-205ENST00000472066 KLHDC9Q8NEP7 349 aa14.01□□□□□ -0.17
PRKCB-205ENST00000472066 OR6J1Q8NGC5 347 aa14.01□□□□□ -0.17
PRKCB-205ENST00000472066 SENP7Q9BQF6 1050 aa14.01□□□□□ -0.17
PRKCB-205ENST00000472066 BCAS3Q9H6U6 928 aa14.01□□□□□ -0.17
PRKCB-205ENST00000472066 MYADML2A6NDP7 307 aa14□□□□□ -0.17
PRKCB-205ENST00000472066 TDP2O95551 362 aa14□□□□□ -0.17
PRKCB-205ENST00000472066 GGPS1O95749 300 aa14□□□□□ -0.17
PRKCB-205ENST00000472066 C6orf222P0C671 652 aaPredicted RBP14□□□□□ -0.17
PRKCB-205ENST00000472066 KCNA2P16389 499 aa14□□□□□ -0.17
PRKCB-205ENST00000472066 LAMC2Q13753 1193 aa14□□□□□ -0.17
PRKCB-205ENST00000472066 Q4G0T1 1027 aa14□□□□□ -0.17
PRKCB-205ENST00000472066 GNASQ5JWF2 1037 aa14□□□□□ -0.17
PRKCB-205ENST00000472066 MYSM1Q5VVJ2 828 aa14□□□□□ -0.17
PRKCB-205ENST00000472066 MCTP1Q6DN14 999 aa14□□□□□ -0.17
PRKCB-205ENST00000472066 PPP4R3AQ6IN85 833 aa14□□□□□ -0.17
PRKCB-205ENST00000472066 CCSAPQ6IQ19 270 aaPredicted RBP14□□□□□ -0.17
PRKCB-205ENST00000472066 MOXD1Q6UVY6 613 aa14□□□□□ -0.17
PRKCB-205ENST00000472066 GIMAP8Q8ND71 665 aaPredicted RBP14□□□□□ -0.17
PRKCB-205ENST00000472066 EMID1Q96A84 441 aaPredicted RBP14□□□□□ -0.17
PRKCB-205ENST00000472066 LENG9Q96B70 501 aa14□□□□□ -0.17
PRKCB-205ENST00000472066 MBOAT7Q96N66 472 aa14□□□□□ -0.17
PRKCB-205ENST00000472066 NAP1L4Q99733 375 aaKnown RBP14□□□□□ -0.17
PRKCB-205ENST00000472066 MLXIPQ9HAP2 919 aa14□□□□□ -0.17
PRKCB-205ENST00000472066 AGO4Q9HCK5 861 aaKnown RBP14□□□□□ -0.17
PRKCB-205ENST00000472066 LRRC37A2A6NM11 1700 aa14□□□□□ -0.17
PRKCB-205ENST00000472066 A6NJR5 290 aa13.99□□□□□ -0.17
PRKCB-205ENST00000472066 DNM1LO00429 736 aa13.99□□□□□ -0.17
PRKCB-205ENST00000472066 SORBS3O60504 671 aa13.99□□□□□ -0.17
PRKCB-205ENST00000472066 CCNT1O60563 726 aaKnown RBP13.99□□□□□ -0.17
PRKCB-205ENST00000472066 CST5P28325 142 aaPredicted RBP13.99□□□□□ -0.17
PRKCB-205ENST00000472066 CPT1AP50416 773 aa13.99□□□□□ -0.17
PRKCB-205ENST00000472066 BEX3Q00994 111 aa13.99□□□□□ -0.17
PRKCB-205ENST00000472066 SETQ01105 290 aaPredicted RBP13.99□□□□□ -0.17
PRKCB-205ENST00000472066 KCNA10Q16322 511 aa13.99□□□□□ -0.17
PRKCB-205ENST00000472066 FSCN1Q16658 493 aaKnown RBP13.99□□□□□ -0.17
PRKCB-205ENST00000472066 CYFIP1Q7L576 1253 aa13.99□□□□□ -0.17
PRKCB-205ENST00000472066 TSEN34Q9BSV6 310 aaKnown RBP13.99□□□□□ -0.17
PRKCB-205ENST00000472066 PKD2L1Q9P0L9 805 aa13.99□□□□□ -0.17
PRKCB-205ENST00000472066 VPS37CA5D8V6 355 aaPredicted RBP13.98□□□□□ -0.17
PRKCB-205ENST00000472066 KBTBD13C9JR72 458 aa13.98□□□□□ -0.17
PRKCB-205ENST00000472066 IPO5O00410 1097 aaKnown RBP13.98□□□□□ -0.17
PRKCB-205ENST00000472066 MSH4O15457 936 aa13.98□□□□□ -0.17
PRKCB-205ENST00000472066 FARP2O94887 1054 aaPredicted RBP13.98□□□□□ -0.17
PRKCB-205ENST00000472066 GCFC2P16383 781 aaKnown RBP13.98□□□□□ -0.17
PRKCB-205ENST00000472066 ITGB3BPQ13352 177 aaPredicted RBP13.98□□□□□ -0.17
PRKCB-205ENST00000472066 METTL7BQ6UX53 244 aa13.98□□□□□ -0.17
PRKCB-205ENST00000472066 UBE2Q1Q7Z7E8 422 aa13.98□□□□□ -0.17
PRKCB-205ENST00000472066 PCSK9Q8NBP7 692 aaKnown RBP13.98□□□□□ -0.17
PRKCB-205ENST00000472066 DIS3LQ8TF46 1054 aaKnown RBP13.98□□□□□ -0.17
PRKCB-205ENST00000472066 AFG1LQ8WV93 481 aa13.98□□□□□ -0.17
PRKCB-205ENST00000472066 SPATA33Q96N06 139 aa13.98□□□□□ -0.17
PRKCB-205ENST00000472066 UIMC1Q96RL1 719 aa13.98□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 39.4 ms