RNA–Protein interactions for RNA: ENST00000471978.5

C9orf3-213, Transcript of chromosome 9 open reading frame 3, humanhuman

TSL 2

Gene C9orf3, Length 478 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf3-213ENST00000471978 HDAC6Q9UBN7 1215 aa26.05■■□□□ 1.76
C9orf3-213ENST00000471978 GTF2IRD1Q9UHL9 959 aa26.05■■□□□ 1.76
C9orf3-213ENST00000471978 CCDC69A6NI79 296 aa26.04■■□□□ 1.76
C9orf3-213ENST00000471978 PPFIA4O75335 1185 aa26.04■■□□□ 1.76
C9orf3-213ENST00000471978 HOXD8P13378 290 aaPredicted RBP26.04■■□□□ 1.76
C9orf3-213ENST00000471978 UBA1P22314 1058 aaKnown RBP26.04■■□□□ 1.76
C9orf3-213ENST00000471978 SMARCA1P28370 1054 aa26.04■■□□□ 1.76
C9orf3-213ENST00000471978 KIAA0753Q2KHM9 967 aa26.04■■□□□ 1.76
C9orf3-213ENST00000471978 HSDL1Q3SXM5 330 aa26.04■■□□□ 1.76
C9orf3-213ENST00000471978 CREB3L3Q68CJ9 461 aa26.04■■□□□ 1.76
C9orf3-213ENST00000471978 AFAP1L1Q8TED9 768 aa26.04■■□□□ 1.76
C9orf3-213ENST00000471978 GPKOWQ92917 476 aaPredicted RBP eCLIP26.04■■□□□ 1.76
C9orf3-213ENST00000471978 COL25A1Q9BXS0 654 aaPredicted RBP26.04■■□□□ 1.76
C9orf3-213ENST00000471978 PCDHA11Q9Y5I1 949 aa26.04■■□□□ 1.76
C9orf3-213ENST00000471978 GBF1Q92538 1859 aa26.04■■□□□ 1.76
C9orf3-213ENST00000471978 MYH7BA7E2Y1 1941 aa26.04■■□□□ 1.76
C9orf3-213ENST00000471978 TANC1Q9C0D5 1861 aa26.03■■□□□ 1.76
C9orf3-213ENST00000471978 HAS3O00219 553 aa26.03■■□□□ 1.76
C9orf3-213ENST00000471978 MYOGP15173 224 aa26.03■■□□□ 1.76
C9orf3-213ENST00000471978 GNAQP50148 359 aa26.03■■□□□ 1.76
C9orf3-213ENST00000471978 COL9A3Q14050 684 aaPredicted RBP26.03■■□□□ 1.76
C9orf3-213ENST00000471978 NECTIN1Q15223 517 aa26.03■■□□□ 1.76
C9orf3-213ENST00000471978 MLXIPQ9HAP2 919 aa26.03■■□□□ 1.76
C9orf3-213ENST00000471978 SEC63Q9UGP8 760 aaKnown RBP26.03■■□□□ 1.76
C9orf3-213ENST00000471978 GNPTABQ3T906 1256 aa26.02■■□□□ 1.76
C9orf3-213ENST00000471978 SKAP1Q86WV1 359 aa26.02■■□□□ 1.76
C9orf3-213ENST00000471978 DHX38Q92620 1227 aaKnown RBP26.02■■□□□ 1.76
C9orf3-213ENST00000471978 FRMPD4Q14CM0 1322 aa26.02■■□□□ 1.76
C9orf3-213ENST00000471978 PLEKHA8P1O95397 391 aa26.01■■□□□ 1.75
C9orf3-213ENST00000471978 SELPP16109 830 aa26.01■■□□□ 1.75
C9orf3-213ENST00000471978 LIFRP42702 1097 aa26.01■■□□□ 1.75
C9orf3-213ENST00000471978 MRPS9P82933 396 aaKnown RBP26.01■■□□□ 1.75
C9orf3-213ENST00000471978 BMP2KLQ5H9B9 411 aa26.01■■□□□ 1.75
C9orf3-213ENST00000471978 PPP2R2DQ66LE6 453 aa26.01■■□□□ 1.75
C9orf3-213ENST00000471978 CENPQQ7L2Z9 268 aaPredicted RBP26.01■■□□□ 1.75
C9orf3-213ENST00000471978 SRBD1Q8N5C6 995 aaKnown RBP26.01■■□□□ 1.75
C9orf3-213ENST00000471978 USP38Q8NB14 1042 aa26.01■■□□□ 1.75
C9orf3-213ENST00000471978 SMARCC2Q8TAQ2 1214 aa26.01■■□□□ 1.75
C9orf3-213ENST00000471978 CUL5Q93034 780 aa26.01■■□□□ 1.75
C9orf3-213ENST00000471978 STAM2O75886 525 aa26■■□□□ 1.75
C9orf3-213ENST00000471978 CALM1P0DP23 149 aa26■■□□□ 1.75
C9orf3-213ENST00000471978 CALM2P0DP24 149 aa26■■□□□ 1.75
C9orf3-213ENST00000471978 CALM3P0DP25 149 aa26■■□□□ 1.75
C9orf3-213ENST00000471978 RXRAP19793 462 aa26■■□□□ 1.75
C9orf3-213ENST00000471978 USP17L6PQ6QN14 398 aa26■■□□□ 1.75
C9orf3-213ENST00000471978 LRRC8DQ7L1W4 858 aa26■■□□□ 1.75
C9orf3-213ENST00000471978 CMTR1Q8N1G2 835 aaKnown RBP26■■□□□ 1.75
C9orf3-213ENST00000471978 SLC9A7Q96T83 725 aa26■■□□□ 1.75
C9orf3-213ENST00000471978 SLC12A7Q9Y666 1083 aa26■■□□□ 1.75
C9orf3-213ENST00000471978 TRIP12Q14669 1992 aaPredicted RBP26■■□□□ 1.75
C9orf3-213ENST00000471978 CKBP12277 381 aa25.99■■□□□ 1.75
C9orf3-213ENST00000471978 RBL2Q08999 1139 aa25.99■■□□□ 1.75
C9orf3-213ENST00000471978 PTK7Q13308 1070 aa25.99■■□□□ 1.75
C9orf3-213ENST00000471978 RAB11FIP4Q86YS3 637 aa25.99■■□□□ 1.75
C9orf3-213ENST00000471978 PHOSPHO2Q8TCD6 241 aa25.99■■□□□ 1.75
C9orf3-213ENST00000471978 INPP4AQ96PE3 977 aaPredicted RBP25.99■■□□□ 1.75
C9orf3-213ENST00000471978 LRRC2Q9BYS8 371 aa25.99■■□□□ 1.75
C9orf3-213ENST00000471978 BCAS3Q9H6U6 928 aa25.99■■□□□ 1.75
C9orf3-213ENST00000471978 RTEL1Q9NZ71 1219 aa25.99■■□□□ 1.75
C9orf3-213ENST00000471978 MYO9BQ13459 2157 aa25.99■■□□□ 1.75
C9orf3-213ENST00000471978 SPATA31C2B4DYI2 1134 aa25.98■■□□□ 1.75
C9orf3-213ENST00000471978 PIK3CDO00329 1044 aa25.98■■□□□ 1.75
C9orf3-213ENST00000471978 MEIS2O14770 477 aa25.98■■□□□ 1.75
C9orf3-213ENST00000471978 BAIAP3O94812 1187 aa25.98■■□□□ 1.75
C9orf3-213ENST00000471978 IGFBP4P22692 258 aa25.98■■□□□ 1.75
C9orf3-213ENST00000471978 ICAM3P32942 547 aa25.98■■□□□ 1.75
C9orf3-213ENST00000471978 ZNF200P98182 395 aaPredicted RBP25.98■■□□□ 1.75
C9orf3-213ENST00000471978 ADGRE1Q14246 886 aa25.98■■□□□ 1.75
C9orf3-213ENST00000471978 PPM1EQ8WY54 764 aa25.98■■□□□ 1.75
C9orf3-213ENST00000471978 C16orf70Q9BSU1 422 aa25.98■■□□□ 1.75
C9orf3-213ENST00000471978 TRANK1O15050 2925 aa25.98■■□□□ 1.75
C9orf3-213ENST00000471978 SPTBN5Q9NRC6 3674 aaKnown RBP25.98■■□□□ 1.75
C9orf3-213ENST00000471978 PARNO95453 639 aaKnown RBP25.97■■□□□ 1.75
C9orf3-213ENST00000471978 NEDD9Q14511 834 aa25.97■■□□□ 1.75
C9orf3-213ENST00000471978 GPNMBQ14956 572 aa25.97■■□□□ 1.75
C9orf3-213ENST00000471978 RNF20Q5VTR2 975 aa25.97■■□□□ 1.75
C9orf3-213ENST00000471978 TET1Q8NFU7 2136 aa25.97■■□□□ 1.75
C9orf3-213ENST00000471978 NOP56O00567 594 aaKnown RBP25.96■■□□□ 1.75
C9orf3-213ENST00000471978 FIBPO43427 364 aa25.96■■□□□ 1.75
C9orf3-213ENST00000471978 CA3P07451 260 aa25.96■■□□□ 1.75
C9orf3-213ENST00000471978 PCNX4Q63HM2 1172 aa25.96■■□□□ 1.75
C9orf3-213ENST00000471978 XRRA1Q6P2D8 792 aa25.96■■□□□ 1.75
C9orf3-213ENST00000471978 CYFIP1Q7L576 1253 aa25.96■■□□□ 1.75
C9orf3-213ENST00000471978 CCDC82Q8N4S0 544 aa25.96■■□□□ 1.75
C9orf3-213ENST00000471978 FANCBQ8NB91 859 aa25.96■■□□□ 1.75
C9orf3-213ENST00000471978 H3BRB1 525 aa25.95■■□□□ 1.74
C9orf3-213ENST00000471978 KCNJ6P48051 423 aa25.95■■□□□ 1.74
C9orf3-213ENST00000471978 SEMA3FQ13275 785 aa25.95■■□□□ 1.74
C9orf3-213ENST00000471978 HIC1Q14526 733 aa25.95■■□□□ 1.74
C9orf3-213ENST00000471978 TRIM71Q2Q1W2 868 aaKnown RBP25.95■■□□□ 1.74
C9orf3-213ENST00000471978 METTL7BQ6UX53 244 aa25.95■■□□□ 1.74
C9orf3-213ENST00000471978 SGMS1Q86VZ5 419 aa25.95■■□□□ 1.74
C9orf3-213ENST00000471978 HERC6Q8IVU3 1022 aa25.95■■□□□ 1.74
C9orf3-213ENST00000471978 WNT8BQ93098 351 aa25.95■■□□□ 1.74
C9orf3-213ENST00000471978 TUT1Q9H6E5 874 aaKnown RBP25.95■■□□□ 1.74
C9orf3-213ENST00000471978 PSTPIP2Q9H939 334 aa25.95■■□□□ 1.74
C9orf3-213ENST00000471978 hCG_1642624A0A1W2PR95 340 aa25.94■■□□□ 1.74
C9orf3-213ENST00000471978 NBNO60934 754 aa25.94■■□□□ 1.74
C9orf3-213ENST00000471978 CXCL10P02778 98 aa25.94■■□□□ 1.74
C9orf3-213ENST00000471978 LGALS2P05162 132 aa25.94■■□□□ 1.74
Retrieved 100 of 20,778 RNA–protein pairs in 18.1 ms