RNA–Protein interactions for RNA: ENST00000471322.2

HSPG2-208, Transcript of heparan sulfate proteoglycan 2, humanhuman

TSL 5

Gene HSPG2, Length 1,602 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HSPG2-208ENST00000471322 LUZP1Q86V48 1076 aa19.73■□□□□ 0.75
HSPG2-208ENST00000471322 RANBP17Q9H2T7 1088 aaKnown RBP19.73■□□□□ 0.75
HSPG2-208ENST00000471322 PLXNB2O15031 1838 aa19.72■□□□□ 0.75
HSPG2-208ENST00000471322 BECN2A8MW95 431 aa19.72■□□□□ 0.75
HSPG2-208ENST00000471322 ATP2A1O14983 1001 aa19.72■□□□□ 0.75
HSPG2-208ENST00000471322 SMC2O95347 1197 aa19.72■□□□□ 0.75
HSPG2-208ENST00000471322 FCER1AP12319 257 aa19.72■□□□□ 0.75
HSPG2-208ENST00000471322 GCFC2P16383 781 aaKnown RBP19.72■□□□□ 0.75
HSPG2-208ENST00000471322 AP3B2Q13367 1082 aa19.72■□□□□ 0.75
HSPG2-208ENST00000471322 GRB14Q14449 540 aa19.72■□□□□ 0.75
HSPG2-208ENST00000471322 PPP4R3AQ6IN85 833 aa19.72■□□□□ 0.75
HSPG2-208ENST00000471322 PDILTQ8N807 584 aa19.72■□□□□ 0.75
HSPG2-208ENST00000471322 SOCS4Q8WXH5 440 aa19.72■□□□□ 0.75
HSPG2-208ENST00000471322 MMP19Q99542 508 aa19.72■□□□□ 0.75
HSPG2-208ENST00000471322 CCPG1Q9ULG6 757 aa19.72■□□□□ 0.75
HSPG2-208ENST00000471322 SLC15A5A6NIM6 579 aa19.71■□□□□ 0.75
HSPG2-208ENST00000471322 FOSP01100 380 aaPredicted RBP19.71■□□□□ 0.75
HSPG2-208ENST00000471322 TRIM32Q13049 653 aa19.71■□□□□ 0.75
HSPG2-208ENST00000471322 MAP2K5Q13163 448 aa19.71■□□□□ 0.75
HSPG2-208ENST00000471322 PNOCQ13519 176 aa19.71■□□□□ 0.75
HSPG2-208ENST00000471322 IQCB1Q15051 598 aa19.71■□□□□ 0.75
HSPG2-208ENST00000471322 HS1BP3Q53T59 392 aa19.71■□□□□ 0.75
HSPG2-208ENST00000471322 NT5DC1Q5TFE4 455 aa19.71■□□□□ 0.75
HSPG2-208ENST00000471322 DPP9Q86TI2 863 aa19.71■□□□□ 0.75
HSPG2-208ENST00000471322 USP6NLQ92738 828 aa19.71■□□□□ 0.75
HSPG2-208ENST00000471322 ERCC4Q92889 916 aaPredicted RBP19.71■□□□□ 0.75
HSPG2-208ENST00000471322 DHX58Q96C10 678 aa19.71■□□□□ 0.75
HSPG2-208ENST00000471322 TMEM60Q9H2L4 133 aa19.71■□□□□ 0.75
HSPG2-208ENST00000471322 SMCHD1A6NHR9 2005 aa19.71■□□□□ 0.75
HSPG2-208ENST00000471322 COBLO75128 1261 aa19.7■□□□□ 0.74
HSPG2-208ENST00000471322 FDX1P10109 184 aa19.7■□□□□ 0.74
HSPG2-208ENST00000471322 RGS2P41220 211 aa19.7■□□□□ 0.74
HSPG2-208ENST00000471322 IRF5Q13568 498 aa19.7■□□□□ 0.74
HSPG2-208ENST00000471322 USH1GQ495M9 461 aa19.7■□□□□ 0.74
HSPG2-208ENST00000471322 C11orf57Q6ZUT1 292 aaPredicted RBP19.7■□□□□ 0.74
HSPG2-208ENST00000471322 TRIML1Q8N9V2 468 aa19.7■□□□□ 0.74
HSPG2-208ENST00000471322 NPLOC4Q8TAT6 608 aa19.7■□□□□ 0.74
HSPG2-208ENST00000471322 TRIB2Q92519 343 aa19.7■□□□□ 0.74
HSPG2-208ENST00000471322 SMARCE1Q969G3 411 aa19.7■□□□□ 0.74
HSPG2-208ENST00000471322 CCSER1Q9C0I3 900 aa19.7■□□□□ 0.74
HSPG2-208ENST00000471322 PCDHA5Q9Y5H7 936 aa19.7■□□□□ 0.74
HSPG2-208ENST00000471322 STRNO43815 780 aa19.69■□□□□ 0.74
HSPG2-208ENST00000471322 ADCY5O95622 1261 aa19.69■□□□□ 0.74
HSPG2-208ENST00000471322 ICAM1P05362 532 aa19.69■□□□□ 0.74
HSPG2-208ENST00000471322 UBA7P41226 1012 aa19.69■□□□□ 0.74
HSPG2-208ENST00000471322 USP11P51784 963 aa19.69■□□□□ 0.74
HSPG2-208ENST00000471322 OAZ1P54368 228 aa19.69■□□□□ 0.74
HSPG2-208ENST00000471322 KCTD2Q14681 263 aa19.69■□□□□ 0.74
HSPG2-208ENST00000471322 MTFR1Q15390 333 aa19.69■□□□□ 0.74
HSPG2-208ENST00000471322 UBE2SQ16763 222 aa19.69■□□□□ 0.74
HSPG2-208ENST00000471322 MUM1L1Q5H9M0 696 aa19.69■□□□□ 0.74
HSPG2-208ENST00000471322 SH3RF1Q7Z6J0 888 aa19.69■□□□□ 0.74
HSPG2-208ENST00000471322 SLAIN1Q8ND83 568 aa19.69■□□□□ 0.74
HSPG2-208ENST00000471322 TRERF1Q96PN7 1200 aa19.69■□□□□ 0.74
HSPG2-208ENST00000471322 RNF146Q9NTX7 359 aa19.69■□□□□ 0.74
HSPG2-208ENST00000471322 FLRT1Q9NZU1 646 aa19.69■□□□□ 0.74
HSPG2-208ENST00000471322 CCDC39Q9UFE4 941 aa19.69■□□□□ 0.74
HSPG2-208ENST00000471322 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP19.69■□□□□ 0.74
HSPG2-208ENST00000471322 INHAP05111 366 aa19.69■□□□□ 0.74
HSPG2-208ENST00000471322 CALCRLQ16602 461 aa19.69■□□□□ 0.74
HSPG2-208ENST00000471322 ANKRD35Q8N283 1001 aa19.69■□□□□ 0.74
HSPG2-208ENST00000471322 ZNF333Q96JL9 665 aa19.69■□□□□ 0.74
HSPG2-208ENST00000471322 APBA2Q99767 749 aa19.69■□□□□ 0.74
HSPG2-208ENST00000471322 RAB34Q9BZG1 259 aa19.69■□□□□ 0.74
HSPG2-208ENST00000471322 A0A087X0B3 334 aa19.68■□□□□ 0.74
HSPG2-208ENST00000471322 SMTNL1A8MU46 457 aa19.68■□□□□ 0.74
HSPG2-208ENST00000471322 BIN1O00499 593 aa19.68■□□□□ 0.74
HSPG2-208ENST00000471322 SARSP49591 514 aaKnown RBP19.68■□□□□ 0.74
HSPG2-208ENST00000471322 SOX10P56693 466 aa19.68■□□□□ 0.74
HSPG2-208ENST00000471322 DPCR1Q3MIW9 517 aa19.68■□□□□ 0.74
HSPG2-208ENST00000471322 ARMC5Q96C12 935 aa19.68■□□□□ 0.74
HSPG2-208ENST00000471322 PAGE5Q96GU1 130 aa19.68■□□□□ 0.74
HSPG2-208ENST00000471322 MTMR9Q96QG7 549 aa19.68■□□□□ 0.74
HSPG2-208ENST00000471322 DACH1Q9UI36 760 aa19.68■□□□□ 0.74
HSPG2-208ENST00000471322 DNAH12Q6ZR08 3092 aa19.67■□□□□ 0.74
HSPG2-208ENST00000471322 KIAA0100Q14667 2235 aaKnown RBP19.67■□□□□ 0.74
HSPG2-208ENST00000471322 PIK3CDO00329 1044 aa19.67■□□□□ 0.74
HSPG2-208ENST00000471322 TPM4P67936 248 aa19.67■□□□□ 0.74
HSPG2-208ENST00000471322 PLCB2Q00722 1185 aa19.67■□□□□ 0.74
HSPG2-208ENST00000471322 E2F4Q16254 413 aa19.67■□□□□ 0.74
HSPG2-208ENST00000471322 TMEM266Q2M3C6 531 aa19.67■□□□□ 0.74
HSPG2-208ENST00000471322 MOXD1Q6UVY6 613 aa19.67■□□□□ 0.74
HSPG2-208ENST00000471322 SPATA20Q8TB22 786 aa19.67■□□□□ 0.74
HSPG2-208ENST00000471322 PXYLP1Q8TE99 480 aa19.67■□□□□ 0.74
HSPG2-208ENST00000471322 ACAD9Q9H845 621 aa19.67■□□□□ 0.74
HSPG2-208ENST00000471322 NFIBO00712 420 aa19.66■□□□□ 0.74
HSPG2-208ENST00000471322 MEIS2O14770 477 aa19.66■□□□□ 0.74
HSPG2-208ENST00000471322 XRCC5P13010 732 aaKnown RBP19.66■□□□□ 0.74
HSPG2-208ENST00000471322 COPB2P35606 906 aa19.66■□□□□ 0.74
HSPG2-208ENST00000471322 FXR2P51116 673 aaKnown RBP eCLIP19.66■□□□□ 0.742e-6■□□□□ 8.3
HSPG2-208ENST00000471322 PDIA5Q14554 519 aa19.66■□□□□ 0.74
HSPG2-208ENST00000471322 CT47A1Q5JQC4 288 aaPredicted RBP19.66■□□□□ 0.74
HSPG2-208ENST00000471322 USP17L6PQ6QN14 398 aa19.66■□□□□ 0.74
HSPG2-208ENST00000471322 ABRAQ8N0Z2 381 aa19.66■□□□□ 0.74
HSPG2-208ENST00000471322 MLKLQ8NB16 471 aa19.66■□□□□ 0.74
HSPG2-208ENST00000471322 CHST13Q8NET6 341 aa19.66■□□□□ 0.74
HSPG2-208ENST00000471322 ANO3Q9BYT9 981 aa19.66■□□□□ 0.74
HSPG2-208ENST00000471322 CUEDC2Q9H467 287 aa19.66■□□□□ 0.74
HSPG2-208ENST00000471322 PNMA2Q9UL42 364 aa19.66■□□□□ 0.74
HSPG2-208ENST00000471322 MRPL11Q9Y3B7 192 aaKnown RBP19.66■□□□□ 0.74
Retrieved 100 of 20,778 RNA–protein pairs in 27.1 ms