RNA–Protein interactions for RNA: ENST00000470819.2

CDKN2A-204, Transcript of cyclin dependent kinase inhibitor 2A, humanhuman

TSL 3

Gene CDKN2A, Length 856 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDKN2A-204ENST00000470819 GPNMBQ14956 572 aa16.44■□□□□ 0.22
CDKN2A-204ENST00000470819 NFXL1Q6ZNB6 911 aa16.44■□□□□ 0.22
CDKN2A-204ENST00000470819 CAGE1Q8TC20 777 aa16.44■□□□□ 0.22
CDKN2A-204ENST00000470819 RRP36Q96EU6 259 aaKnown RBP16.44■□□□□ 0.22
CDKN2A-204ENST00000470819 MAP3K14Q99558 947 aa16.44■□□□□ 0.22
CDKN2A-204ENST00000470819 SH2B2O14492 632 aaPredicted RBP16.43■□□□□ 0.22
CDKN2A-204ENST00000470819 PLEKHA8P1O95397 391 aa16.43■□□□□ 0.22
CDKN2A-204ENST00000470819 F2P00734 622 aa16.43■□□□□ 0.22
CDKN2A-204ENST00000470819 TGFB3P10600 412 aa16.43■□□□□ 0.22
CDKN2A-204ENST00000470819 HOXD8P13378 290 aaPredicted RBP16.43■□□□□ 0.22
CDKN2A-204ENST00000470819 SELPP16109 830 aa16.43■□□□□ 0.22
CDKN2A-204ENST00000470819 IGFBP4P22692 258 aa16.43■□□□□ 0.22
CDKN2A-204ENST00000470819 KIF5BP33176 963 aa16.43■□□□□ 0.22
CDKN2A-204ENST00000470819 MRPS9P82933 396 aaKnown RBP16.43■□□□□ 0.22
CDKN2A-204ENST00000470819 ZNF200P98182 395 aaPredicted RBP16.43■□□□□ 0.22
CDKN2A-204ENST00000470819 NECTIN1Q15223 517 aa16.43■□□□□ 0.22
CDKN2A-204ENST00000470819 PPP2R2DQ66LE6 453 aa16.43■□□□□ 0.22
CDKN2A-204ENST00000470819 CREB3L3Q68CJ9 461 aa16.43■□□□□ 0.22
CDKN2A-204ENST00000470819 USP17L6PQ6QN14 398 aa16.43■□□□□ 0.22
CDKN2A-204ENST00000470819 CMTR1Q8N1G2 835 aaKnown RBP16.43■□□□□ 0.22
CDKN2A-204ENST00000470819 CCDC155Q8N6L0 562 aa16.43■□□□□ 0.22
CDKN2A-204ENST00000470819 AFAP1L1Q8TED9 768 aa16.43■□□□□ 0.22
CDKN2A-204ENST00000470819 MTA3Q9BTC8 594 aa16.43■□□□□ 0.22
CDKN2A-204ENST00000470819 KATNAL1Q9BW62 490 aa16.43■□□□□ 0.22
CDKN2A-204ENST00000470819 SPZ1Q9BXG8 430 aa16.43■□□□□ 0.22
CDKN2A-204ENST00000470819 MLXIPQ9HAP2 919 aa16.43■□□□□ 0.22
CDKN2A-204ENST00000470819 PRDM6Q9NQX0 595 aa16.43■□□□□ 0.22
CDKN2A-204ENST00000470819 RTEL1Q9NZ71 1219 aa16.43■□□□□ 0.22
CDKN2A-204ENST00000470819 CCDC69A6NI79 296 aa16.42■□□□□ 0.22
CDKN2A-204ENST00000470819 RXRAP19793 462 aa16.42■□□□□ 0.22
CDKN2A-204ENST00000470819 SMARCA1P28370 1054 aa16.42■□□□□ 0.22
CDKN2A-204ENST00000470819 HIC1Q14526 733 aa16.42■□□□□ 0.22
CDKN2A-204ENST00000470819 CCDC85BQ15834 202 aaPredicted RBP16.42■□□□□ 0.22
CDKN2A-204ENST00000470819 LRRC8DQ7L1W4 858 aa16.42■□□□□ 0.22
CDKN2A-204ENST00000470819 RAB11FIP4Q86YS3 637 aa16.42■□□□□ 0.22
CDKN2A-204ENST00000470819 TMTC2Q8N394 836 aa16.42■□□□□ 0.22
CDKN2A-204ENST00000470819 SRBD1Q8N5C6 995 aaKnown RBP16.42■□□□□ 0.22
CDKN2A-204ENST00000470819 SMARCC2Q8TAQ2 1214 aa16.42■□□□□ 0.22
CDKN2A-204ENST00000470819 TMEM87BQ96K49 555 aa16.42■□□□□ 0.22
CDKN2A-204ENST00000470819 LZTS2Q9BRK4 669 aa16.42■□□□□ 0.22
CDKN2A-204ENST00000470819 C16orf70Q9BSU1 422 aa16.42■□□□□ 0.22
CDKN2A-204ENST00000470819 LRRC2Q9BYS8 371 aa16.42■□□□□ 0.22
CDKN2A-204ENST00000470819 ANO2Q9NQ90 1003 aa16.42■□□□□ 0.22
CDKN2A-204ENST00000470819 CA3P07451 260 aa16.41■□□□□ 0.22
CDKN2A-204ENST00000470819 CKBP12277 381 aa16.41■□□□□ 0.22
CDKN2A-204ENST00000470819 PHOSPHO2Q8TCD6 241 aa16.41■□□□□ 0.22
CDKN2A-204ENST00000470819 WNT8BQ93098 351 aa16.41■□□□□ 0.22
CDKN2A-204ENST00000470819 SLC9A7Q96T83 725 aa16.41■□□□□ 0.22
CDKN2A-204ENST00000470819 SEC63Q9UGP8 760 aaKnown RBP16.41■□□□□ 0.22
CDKN2A-204ENST00000470819 SPATA31C2B4DYI2 1134 aa16.4■□□□□ 0.22
CDKN2A-204ENST00000470819 MEIS2O14770 477 aa16.4■□□□□ 0.22
CDKN2A-204ENST00000470819 NBNO60934 754 aa16.4■□□□□ 0.22
CDKN2A-204ENST00000470819 ICAM3P32942 547 aa16.4■□□□□ 0.22
CDKN2A-204ENST00000470819 LIFRP42702 1097 aa16.4■□□□□ 0.22
CDKN2A-204ENST00000470819 GNAQP50148 359 aa16.4■□□□□ 0.22
CDKN2A-204ENST00000470819 RBL2Q08999 1139 aa16.4■□□□□ 0.22
CDKN2A-204ENST00000470819 SEMA3FQ13275 785 aa16.4■□□□□ 0.22
CDKN2A-204ENST00000470819 PTK7Q13308 1070 aa16.4■□□□□ 0.22
CDKN2A-204ENST00000470819 TCTN1Q2MV58 587 aa16.4■□□□□ 0.22
CDKN2A-204ENST00000470819 TRIM71Q2Q1W2 868 aaKnown RBP16.4■□□□□ 0.22
CDKN2A-204ENST00000470819 GNPTABQ3T906 1256 aa16.4■□□□□ 0.22
CDKN2A-204ENST00000470819 CYFIP1Q7L576 1253 aa16.4■□□□□ 0.22
CDKN2A-204ENST00000470819 HERC6Q8IVU3 1022 aa16.4■□□□□ 0.22
CDKN2A-204ENST00000470819 CCDC82Q8N4S0 544 aa16.4■□□□□ 0.22
CDKN2A-204ENST00000470819 CUL5Q93034 780 aa16.4■□□□□ 0.22
CDKN2A-204ENST00000470819 INPP4AQ96PE3 977 aaPredicted RBP16.4■□□□□ 0.22
CDKN2A-204ENST00000470819 CERS4Q9HA82 394 aa16.4■□□□□ 0.22
CDKN2A-204ENST00000470819 SLC12A7Q9Y666 1083 aa16.4■□□□□ 0.22
CDKN2A-204ENST00000470819 FRMPD4Q14CM0 1322 aa16.4■□□□□ 0.22
CDKN2A-204ENST00000470819 hCG_1642624A0A1W2PR95 340 aa16.39■□□□□ 0.21
CDKN2A-204ENST00000470819 H3BRB1 525 aa16.39■□□□□ 0.21
CDKN2A-204ENST00000470819 RFXAPO00287 272 aa16.39■□□□□ 0.21
CDKN2A-204ENST00000470819 PIK3CDO00329 1044 aa16.39■□□□□ 0.21
CDKN2A-204ENST00000470819 STAM2O75886 525 aa16.39■□□□□ 0.21
CDKN2A-204ENST00000470819 BAIAP3O94812 1187 aa16.39■□□□□ 0.21
CDKN2A-204ENST00000470819 LGALS2P05162 132 aa16.39■□□□□ 0.21
CDKN2A-204ENST00000470819 ZNF618Q5T7W0 954 aa16.39■□□□□ 0.21
CDKN2A-204ENST00000470819 TRAF7Q6Q0C0 670 aa16.39■□□□□ 0.21
CDKN2A-204ENST00000470819 TMCO2Q7Z6W1 182 aaPredicted RBP16.39■□□□□ 0.21
CDKN2A-204ENST00000470819 TUT1Q9H6E5 874 aaKnown RBP16.39■□□□□ 0.21
CDKN2A-204ENST00000470819 TELO2Q9Y4R8 837 aa16.39■□□□□ 0.21
CDKN2A-204ENST00000470819 NOP56O00567 594 aaKnown RBP16.38■□□□□ 0.21
CDKN2A-204ENST00000470819 FIBPO43427 364 aa16.38■□□□□ 0.21
CDKN2A-204ENST00000470819 ARHGEF15O94989 841 aa16.38■□□□□ 0.21
CDKN2A-204ENST00000470819 PARNO95453 639 aaKnown RBP16.38■□□□□ 0.21
CDKN2A-204ENST00000470819 CXCL10P02778 98 aa16.38■□□□□ 0.21
CDKN2A-204ENST00000470819 CALM1P0DP23 149 aa16.38■□□□□ 0.21
CDKN2A-204ENST00000470819 CALM2P0DP24 149 aa16.38■□□□□ 0.21
CDKN2A-204ENST00000470819 CALM3P0DP25 149 aa16.38■□□□□ 0.21
CDKN2A-204ENST00000470819 KCNJ6P48051 423 aa16.38■□□□□ 0.21
CDKN2A-204ENST00000470819 WDR5P61964 334 aaKnown RBP16.38■□□□□ 0.21
CDKN2A-204ENST00000470819 NEDD9Q14511 834 aa16.38■□□□□ 0.21
CDKN2A-204ENST00000470819 BMP2KLQ5H9B9 411 aa16.38■□□□□ 0.21
CDKN2A-204ENST00000470819 PCNX4Q63HM2 1172 aa16.38■□□□□ 0.21
CDKN2A-204ENST00000470819 FANCBQ8NB91 859 aa16.38■□□□□ 0.21
CDKN2A-204ENST00000470819 PSTPIP2Q9H939 334 aa16.38■□□□□ 0.21
CDKN2A-204ENST00000470819 BAZ2BQ9UIF8 2168 aaKnown RBP16.38■□□□□ 0.21
CDKN2A-204ENST00000470819 SCN5AQ14524 2016 aa16.37■□□□□ 0.21
CDKN2A-204ENST00000470819 C17orf102A2RUQ5 167 aa16.37■□□□□ 0.21
CDKN2A-204ENST00000470819 KIF28PB7ZC32 967 aa16.37■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 18.9 ms