RNA–Protein interactions for RNA: ENST00000467933.2

SRGAP2B-202, Transcript of SLIT-ROBO Rho GTPase activating protein 2B, humanhuman

TSL 4

Gene SRGAP2B, Length 542 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRGAP2B-202ENST00000467933 CHD7Q9P2D1 2997 aa18.41■□□□□ 0.54
SRGAP2B-202ENST00000467933 GCOM1H8Y6P7 765 aaPredicted RBP18.4■□□□□ 0.54
SRGAP2B-202ENST00000467933 PRC1O43663 620 aa18.4■□□□□ 0.54
SRGAP2B-202ENST00000467933 TLL1O43897 1013 aa18.4■□□□□ 0.54
SRGAP2B-202ENST00000467933 MMP3P08254 477 aa18.4■□□□□ 0.54
SRGAP2B-202ENST00000467933 POLR2MP0CAP2 368 aa18.4■□□□□ 0.54
SRGAP2B-202ENST00000467933 CALM1P0DP23 149 aa18.4■□□□□ 0.54
SRGAP2B-202ENST00000467933 CALM2P0DP24 149 aa18.4■□□□□ 0.54
SRGAP2B-202ENST00000467933 CALM3P0DP25 149 aa18.4■□□□□ 0.54
SRGAP2B-202ENST00000467933 TGFB3P10600 412 aa18.4■□□□□ 0.54
SRGAP2B-202ENST00000467933 SELPP16109 830 aa18.4■□□□□ 0.54
SRGAP2B-202ENST00000467933 HOMER1Q86YM7 354 aa18.4■□□□□ 0.54
SRGAP2B-202ENST00000467933 DHX37Q8IY37 1157 aaKnown RBP18.4■□□□□ 0.54
SRGAP2B-202ENST00000467933 ZNF654Q8IZM8 581 aa18.4■□□□□ 0.54
SRGAP2B-202ENST00000467933 PDCD2LQ9BRP1 358 aa18.4■□□□□ 0.54
SRGAP2B-202ENST00000467933 ANO2Q9NQ90 1003 aa18.4■□□□□ 0.54
SRGAP2B-202ENST00000467933 COG5Q9UP83 839 aa18.4■□□□□ 0.54
SRGAP2B-202ENST00000467933 MRVI1Q9Y6F6 885 aa18.4■□□□□ 0.54
SRGAP2B-202ENST00000467933 EFCAB14O75071 495 aa18.39■□□□□ 0.53
SRGAP2B-202ENST00000467933 PPFIA4O75335 1185 aa18.39■□□□□ 0.53
SRGAP2B-202ENST00000467933 EIF2AK2P19525 551 aaKnown RBP18.39■□□□□ 0.53
SRGAP2B-202ENST00000467933 ARHGAP1Q07960 439 aa18.39■□□□□ 0.53
SRGAP2B-202ENST00000467933 TSGA10IPQ3SY00 556 aa18.39■□□□□ 0.53
SRGAP2B-202ENST00000467933 ARNTL2Q8WYA1 636 aa18.39■□□□□ 0.53
SRGAP2B-202ENST00000467933 MTCH2Q9Y6C9 303 aa18.39■□□□□ 0.53
SRGAP2B-202ENST00000467933 ABHD14A-ACY1A0A1B0GW23 586 aa18.38■□□□□ 0.53
SRGAP2B-202ENST00000467933 CCDC69A6NI79 296 aa18.38■□□□□ 0.53
SRGAP2B-202ENST00000467933 SH2B2O14492 632 aaPredicted RBP18.38■□□□□ 0.53
SRGAP2B-202ENST00000467933 TAP1Q03518 808 aa18.38■□□□□ 0.53
SRGAP2B-202ENST00000467933 GDF6Q6KF10 455 aaPredicted RBP18.38■□□□□ 0.53
SRGAP2B-202ENST00000467933 LRRC8DQ7L1W4 858 aa18.38■□□□□ 0.53
SRGAP2B-202ENST00000467933 PPTC7Q8NI37 304 aa18.38■□□□□ 0.53
SRGAP2B-202ENST00000467933 PPP1R13LQ8WUF5 828 aa18.38■□□□□ 0.53
SRGAP2B-202ENST00000467933 RRP36Q96EU6 259 aaKnown RBP18.38■□□□□ 0.53
SRGAP2B-202ENST00000467933 CERS4Q9HA82 394 aa18.38■□□□□ 0.53
SRGAP2B-202ENST00000467933 GTF2IRD1Q9UHL9 959 aa18.38■□□□□ 0.53
SRGAP2B-202ENST00000467933 MUC3AQ02505 3323 aa18.38■□□□□ 0.53
SRGAP2B-202ENST00000467933 SCN10AQ9Y5Y9 1956 aa18.37■□□□□ 0.53
SRGAP2B-202ENST00000467933 STAM2O75886 525 aa18.37■□□□□ 0.53
SRGAP2B-202ENST00000467933 BMP1P13497 986 aa18.37■□□□□ 0.53
SRGAP2B-202ENST00000467933 RBL2Q08999 1139 aa18.37■□□□□ 0.53
SRGAP2B-202ENST00000467933 IKBKEQ14164 716 aa18.37■□□□□ 0.53
SRGAP2B-202ENST00000467933 PGM5Q15124 567 aa18.37■□□□□ 0.53
SRGAP2B-202ENST00000467933 CNKSR3Q6P9H4 555 aa18.37■□□□□ 0.53
SRGAP2B-202ENST00000467933 NFXL1Q6ZNB6 911 aa18.37■□□□□ 0.53
SRGAP2B-202ENST00000467933 SGMS1Q86VZ5 419 aa18.37■□□□□ 0.53
SRGAP2B-202ENST00000467933 KAT2BQ92831 832 aa18.37■□□□□ 0.53
SRGAP2B-202ENST00000467933 RFXAPO00287 272 aa18.36■□□□□ 0.53
SRGAP2B-202ENST00000467933 CKBP12277 381 aa18.36■□□□□ 0.53
SRGAP2B-202ENST00000467933 COL9A1P20849 921 aa18.36■□□□□ 0.53
SRGAP2B-202ENST00000467933 HOXA13P31271 388 aaPredicted RBP18.36■□□□□ 0.53
SRGAP2B-202ENST00000467933 PSEN2P49810 448 aa18.36■□□□□ 0.53
SRGAP2B-202ENST00000467933 PTK7Q13308 1070 aa18.36■□□□□ 0.53
SRGAP2B-202ENST00000467933 RAD9AQ99638 391 aa18.36■□□□□ 0.53
SRGAP2B-202ENST00000467933 HDAC6Q9UBN7 1215 aa18.36■□□□□ 0.53
SRGAP2B-202ENST00000467933 SLC12A7Q9Y666 1083 aa18.36■□□□□ 0.53
SRGAP2B-202ENST00000467933 PIK3CDO00329 1044 aa18.35■□□□□ 0.53
SRGAP2B-202ENST00000467933 CDC45O75419 566 aa18.35■□□□□ 0.53
SRGAP2B-202ENST00000467933 RGS20O76081 388 aa18.35■□□□□ 0.53
SRGAP2B-202ENST00000467933 MYCLP12524 364 aaPredicted RBP18.35■□□□□ 0.53
SRGAP2B-202ENST00000467933 CCND2P30279 289 aa18.35■□□□□ 0.53
SRGAP2B-202ENST00000467933 KRT32Q14532 448 aa18.35■□□□□ 0.53
SRGAP2B-202ENST00000467933 MFSD10Q14728 455 aa18.35■□□□□ 0.53
SRGAP2B-202ENST00000467933 KIAA0753Q2KHM9 967 aa18.35■□□□□ 0.53
SRGAP2B-202ENST00000467933 FANCBQ8NB91 859 aa18.35■□□□□ 0.53
SRGAP2B-202ENST00000467933 HLA-CQ95604 372 aa18.35■□□□□ 0.53
SRGAP2B-202ENST00000467933 NEK1Q96PY6 1258 aa18.35■□□□□ 0.53
SRGAP2B-202ENST00000467933 ALG1Q9BT22 464 aa18.35■□□□□ 0.53
SRGAP2B-202ENST00000467933 C1QTNF1Q9BXJ1 281 aa18.35■□□□□ 0.53
SRGAP2B-202ENST00000467933 LMCD1Q9NZU5 365 aa18.35■□□□□ 0.53
SRGAP2B-202ENST00000467933 SEC63Q9UGP8 760 aaKnown RBP18.35■□□□□ 0.53
SRGAP2B-202ENST00000467933 MYO9BQ13459 2157 aa18.35■□□□□ 0.53
SRGAP2B-202ENST00000467933 KIAA1217Q5T5P2 1943 aa18.35■□□□□ 0.53
SRGAP2B-202ENST00000467933 TRANK1O15050 2925 aa18.34■□□□□ 0.53
SRGAP2B-202ENST00000467933 F2P00734 622 aa18.34■□□□□ 0.53
SRGAP2B-202ENST00000467933 CXCL10P02778 98 aa18.34■□□□□ 0.53
SRGAP2B-202ENST00000467933 HOXD8P13378 290 aaPredicted RBP18.34■□□□□ 0.53
SRGAP2B-202ENST00000467933 WDR5P61964 334 aaKnown RBP18.34■□□□□ 0.53
SRGAP2B-202ENST00000467933 TFF2Q03403 129 aa18.34■□□□□ 0.53
SRGAP2B-202ENST00000467933 CELF3Q5SZQ8 465 aaKnown RBP18.34■□□□□ 0.53
SRGAP2B-202ENST00000467933 MYSM1Q5VVJ2 828 aa18.34■□□□□ 0.53
SRGAP2B-202ENST00000467933 XRRA1Q6P2D8 792 aa18.34■□□□□ 0.53
SRGAP2B-202ENST00000467933 SYNE3Q6ZMZ3 975 aa18.34■□□□□ 0.53
SRGAP2B-202ENST00000467933 FCHSD1Q86WN1 690 aa18.34■□□□□ 0.53
SRGAP2B-202ENST00000467933 SRBD1Q8N5C6 995 aaKnown RBP18.34■□□□□ 0.53
SRGAP2B-202ENST00000467933 CCDC136Q96JN2 1154 aa18.34■□□□□ 0.53
SRGAP2B-202ENST00000467933 SPATA33Q96N06 139 aa18.34■□□□□ 0.53
SRGAP2B-202ENST00000467933 XIRP2A4UGR9 3374 aa18.34■□□□□ 0.53
SRGAP2B-202ENST00000467933 FRMPD4Q14CM0 1322 aa18.33■□□□□ 0.53
SRGAP2B-202ENST00000467933 EMSYQ7Z589 1322 aa18.33■□□□□ 0.53
SRGAP2B-202ENST00000467933 HAS3O00219 553 aa18.33■□□□□ 0.52
SRGAP2B-202ENST00000467933 ICAM3P32942 547 aa18.33■□□□□ 0.52
SRGAP2B-202ENST00000467933 EXOSC10Q01780 885 aaKnown RBP18.33■□□□□ 0.52
SRGAP2B-202ENST00000467933 DHX32Q7L7V1 743 aaKnown RBP18.33■□□□□ 0.52
SRGAP2B-202ENST00000467933 TEX2Q8IWB9 1127 aa18.33■□□□□ 0.52
SRGAP2B-202ENST00000467933 CUL5Q93034 780 aa18.33■□□□□ 0.52
SRGAP2B-202ENST00000467933 CTAGE1Q96RT6 745 aa18.33■□□□□ 0.52
SRGAP2B-202ENST00000467933 MYL10Q9BUA6 226 aa18.33■□□□□ 0.52
SRGAP2B-202ENST00000467933 MLXIPQ9HAP2 919 aa18.33■□□□□ 0.52
SRGAP2B-202ENST00000467933 GJB5O95377 273 aa18.32■□□□□ 0.52
Retrieved 100 of 20,778 RNA–protein pairs in 22.5 ms