RNA–Protein interactions for RNA: ENST00000467789.5

SSR3-205, Transcript of signal sequence receptor subunit 3, humanhuman

TSL 2 BASIC

Gene SSR3, Length 1,039 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSR3-205ENST00000467789 CSF2RAP15509 400 aa11.97□□□□□ -0.49
SSR3-205ENST00000467789 PTGS1P23219 599 aa11.97□□□□□ -0.49
SSR3-205ENST00000467789 CCND2P30279 289 aa11.97□□□□□ -0.49
SSR3-205ENST00000467789 PSMC6P62333 389 aa11.97□□□□□ -0.49
SSR3-205ENST00000467789 ARHGAP1Q07960 439 aa11.97□□□□□ -0.49
SSR3-205ENST00000467789 LAMC2Q13753 1193 aa11.97□□□□□ -0.49
SSR3-205ENST00000467789 KRT32Q14532 448 aa11.97□□□□□ -0.49
SSR3-205ENST00000467789 PGM5Q15124 567 aa11.97□□□□□ -0.49
SSR3-205ENST00000467789 DGKDQ16760 1214 aa11.97□□□□□ -0.49
SSR3-205ENST00000467789 LY6KQ17RY6 165 aa11.97□□□□□ -0.49
SSR3-205ENST00000467789 SLC35G1Q2M3R5 365 aa11.97□□□□□ -0.49
SSR3-205ENST00000467789 TMEM240Q5SV17 173 aa11.97□□□□□ -0.49
SSR3-205ENST00000467789 SGMS1Q86VZ5 419 aa11.97□□□□□ -0.49
SSR3-205ENST00000467789 TEX2Q8IWB9 1127 aa11.97□□□□□ -0.49
SSR3-205ENST00000467789 COPS5Q92905 334 aa11.97□□□□□ -0.49
SSR3-205ENST00000467789 BUD13Q9BRD0 619 aaKnown RBP eCLIP11.97□□□□□ -0.494e-7■□□□□ 9.2
SSR3-205ENST00000467789 KATNAL1Q9BW62 490 aa11.97□□□□□ -0.49
SSR3-205ENST00000467789 TRPV6Q9H1D0 765 aa11.97□□□□□ -0.49
SSR3-205ENST00000467789 DDX41Q9UJV9 622 aaKnown RBP11.97□□□□□ -0.49
SSR3-205ENST00000467789 SLC12A7Q9Y666 1083 aa11.97□□□□□ -0.49
SSR3-205ENST00000467789 MYH7BA7E2Y1 1941 aa11.96□□□□□ -0.49
SSR3-205ENST00000467789 FRMPD4Q14CM0 1322 aa11.96□□□□□ -0.49
SSR3-205ENST00000467789 PIK3CDO00329 1044 aa11.96□□□□□ -0.49
SSR3-205ENST00000467789 HMGB1P09429 215 aaKnown RBP11.96□□□□□ -0.49
SSR3-205ENST00000467789 MYCLP12524 364 aaPredicted RBP11.96□□□□□ -0.49
SSR3-205ENST00000467789 HOXA13P31271 388 aaPredicted RBP11.96□□□□□ -0.49
SSR3-205ENST00000467789 CYP2C18P33260 490 aa11.96□□□□□ -0.49
SSR3-205ENST00000467789 NBPF20Q3BBV1 942 aa11.96□□□□□ -0.49
SSR3-205ENST00000467789 GNPTABQ3T906 1256 aa11.96□□□□□ -0.49
SSR3-205ENST00000467789 RASIP1Q5U651 963 aa11.96□□□□□ -0.49
SSR3-205ENST00000467789 XRRA1Q6P2D8 792 aa11.96□□□□□ -0.49
SSR3-205ENST00000467789 SYNE3Q6ZMZ3 975 aa11.96□□□□□ -0.49
SSR3-205ENST00000467789 SESTD1Q86VW0 696 aa11.96□□□□□ -0.49
SSR3-205ENST00000467789 DHX37Q8IY37 1157 aaKnown RBP11.96□□□□□ -0.49
SSR3-205ENST00000467789 CCDC155Q8N6L0 562 aa11.96□□□□□ -0.49
SSR3-205ENST00000467789 PPTC7Q8NI37 304 aa11.96□□□□□ -0.49
SSR3-205ENST00000467789 AFG1LQ8WV93 481 aa11.96□□□□□ -0.49
SSR3-205ENST00000467789 CUL5Q93034 780 aa11.96□□□□□ -0.49
SSR3-205ENST00000467789 CCDC136Q96JN2 1154 aa11.96□□□□□ -0.49
SSR3-205ENST00000467789 NEK1Q96PY6 1258 aa11.96□□□□□ -0.49
SSR3-205ENST00000467789 PPFIA4O75335 1185 aa11.95□□□□□ -0.5
SSR3-205ENST00000467789 FGBP02675 491 aa11.95□□□□□ -0.5
SSR3-205ENST00000467789 HOXD8P13378 290 aaPredicted RBP11.95□□□□□ -0.5
SSR3-205ENST00000467789 RFC2P35250 354 aa11.95□□□□□ -0.5
SSR3-205ENST00000467789 BFSP2Q13515 415 aa11.95□□□□□ -0.5
SSR3-205ENST00000467789 DSG2Q14126 1118 aa11.95□□□□□ -0.5
SSR3-205ENST00000467789 FAM47CQ5HY64 1035 aa11.95□□□□□ -0.5
SSR3-205ENST00000467789 ZNF365Q70YC5 407 aa11.95□□□□□ -0.5
SSR3-205ENST00000467789 C16orf59Q7L2K0 433 aa11.95□□□□□ -0.5
SSR3-205ENST00000467789 FCHSD1Q86WN1 690 aa11.95□□□□□ -0.5
SSR3-205ENST00000467789 FANCBQ8NB91 859 aa11.95□□□□□ -0.5
SSR3-205ENST00000467789 HERVK_113Q902F9 699 aa11.95□□□□□ -0.5
SSR3-205ENST00000467789 SEMA6BQ9H3T3 888 aa11.95□□□□□ -0.5
SSR3-205ENST00000467789 TRMT13Q9NUP7 481 aaKnown RBP11.95□□□□□ -0.5
SSR3-205ENST00000467789 NOD1Q9Y239 953 aa11.95□□□□□ -0.5
SSR3-205ENST00000467789 RGS20O76081 388 aa11.94□□□□□ -0.5
SSR3-205ENST00000467789 PARNO95453 639 aaKnown RBP11.94□□□□□ -0.5
SSR3-205ENST00000467789 RCAN1P53805 252 aa11.94□□□□□ -0.5
SSR3-205ENST00000467789 CELF3Q5SZQ8 465 aaKnown RBP11.94□□□□□ -0.5
SSR3-205ENST00000467789 MYSM1Q5VVJ2 828 aa11.94□□□□□ -0.5
SSR3-205ENST00000467789 DHX32Q7L7V1 743 aaKnown RBP11.94□□□□□ -0.5
SSR3-205ENST00000467789 PLPP6Q8IY26 295 aa11.94□□□□□ -0.5
SSR3-205ENST00000467789 SRBD1Q8N5C6 995 aaKnown RBP11.94□□□□□ -0.5
SSR3-205ENST00000467789 RETREG2Q8NC44 543 aa11.94□□□□□ -0.5
SSR3-205ENST00000467789 SMARCC2Q8TAQ2 1214 aa11.94□□□□□ -0.5
SSR3-205ENST00000467789 CAGE1Q8TC20 777 aa11.94□□□□□ -0.5
SSR3-205ENST00000467789 INPP4AQ96PE3 977 aaPredicted RBP11.94□□□□□ -0.5
SSR3-205ENST00000467789 MYL10Q9BUA6 226 aa11.94□□□□□ -0.5
SSR3-205ENST00000467789 WNT8AQ9H1J5 351 aa11.94□□□□□ -0.5
SSR3-205ENST00000467789 RBM28Q9NW13 759 aaKnown RBP11.94□□□□□ -0.5
SSR3-205ENST00000467789 TANC1Q9C0D5 1861 aa11.93□□□□□ -0.5
SSR3-205ENST00000467789 UMODL1Q5DID0 1318 aa11.93□□□□□ -0.5
SSR3-205ENST00000467789 hCG_1984214I3L0E3 225 aa11.93□□□□□ -0.5
SSR3-205ENST00000467789 F2P00734 622 aa11.93□□□□□ -0.5
SSR3-205ENST00000467789 ACTN1P12814 892 aa11.93□□□□□ -0.5
SSR3-205ENST00000467789 DNAJB2P25686 324 aa11.93□□□□□ -0.5
SSR3-205ENST00000467789 ICAM3P32942 547 aa11.93□□□□□ -0.5
SSR3-205ENST00000467789 CCL23P55773 120 aa11.93□□□□□ -0.5
SSR3-205ENST00000467789 EXOSC10Q01780 885 aaKnown RBP11.93□□□□□ -0.5
SSR3-205ENST00000467789 NEDD9Q14511 834 aa11.93□□□□□ -0.5
SSR3-205ENST00000467789 PCNX4Q63HM2 1172 aa11.93□□□□□ -0.5
SSR3-205ENST00000467789 APOA5Q6Q788 366 aa11.93□□□□□ -0.5
SSR3-205ENST00000467789 TMTC3Q6ZXV5 915 aa11.93□□□□□ -0.5
SSR3-205ENST00000467789 ZNF713Q8N859 430 aaPredicted RBP11.93□□□□□ -0.5
SSR3-205ENST00000467789 KAT2BQ92831 832 aa11.93□□□□□ -0.5
SSR3-205ENST00000467789 GUCD1Q96NT3 240 aa11.93□□□□□ -0.5
SSR3-205ENST00000467789 HAS3O00219 553 aa11.92□□□□□ -0.5
SSR3-205ENST00000467789 MEIS2O14770 477 aa11.92□□□□□ -0.5
SSR3-205ENST00000467789 FIBPO43427 364 aa11.92□□□□□ -0.5
SSR3-205ENST00000467789 EPB41L2O43491 1005 aaKnown RBP11.92□□□□□ -0.5
SSR3-205ENST00000467789 PLEKHA8P1O95397 391 aa11.92□□□□□ -0.5
SSR3-205ENST00000467789 GGPS1O95749 300 aa11.92□□□□□ -0.5
SSR3-205ENST00000467789 ACRP10323 421 aa11.92□□□□□ -0.5
SSR3-205ENST00000467789 CYP2C9P11712 490 aa11.92□□□□□ -0.5
SSR3-205ENST00000467789 UBA1P22314 1058 aaKnown RBP11.92□□□□□ -0.5
SSR3-205ENST00000467789 RBL2Q08999 1139 aa11.92□□□□□ -0.5
SSR3-205ENST00000467789 RAB30Q15771 203 aa11.92□□□□□ -0.5
SSR3-205ENST00000467789 PTGISQ16647 500 aa11.92□□□□□ -0.5
SSR3-205ENST00000467789 NLRX1Q86UT6 975 aa11.92□□□□□ -0.5
SSR3-205ENST00000467789 MICU3Q86XE3 530 aa11.92□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 47.4 ms