RNA–Protein interactions for RNA: ENST00000467464.1

PTPRF-211, Transcript of protein tyrosine phosphatase, receptor type F, humanhuman

TSL 3

Gene PTPRF, Length 571 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRF-211ENST00000467464 LZTS2Q9BRK4 669 aa13.83□□□□□ -0.2
PTPRF-211ENST00000467464 MTIF3Q9H2K0 278 aaKnown RBP13.83□□□□□ -0.2
PTPRF-211ENST00000467464 HDAC6Q9UBN7 1215 aa13.83□□□□□ -0.2
PTPRF-211ENST00000467464 SPTBN5Q9NRC6 3674 aaKnown RBP13.82□□□□□ -0.2
PTPRF-211ENST00000467464 CCDC69A6NI79 296 aa13.82□□□□□ -0.2
PTPRF-211ENST00000467464 SORBS3O60504 671 aa13.82□□□□□ -0.2
PTPRF-211ENST00000467464 FOSL2P15408 326 aa13.82□□□□□ -0.2
PTPRF-211ENST00000467464 HOXC8P31273 242 aa13.82□□□□□ -0.2
PTPRF-211ENST00000467464 RFC2P35250 354 aa13.82□□□□□ -0.2
PTPRF-211ENST00000467464 EXOSC10Q01780 885 aaKnown RBP13.82□□□□□ -0.2
PTPRF-211ENST00000467464 FUT2Q10981 343 aa13.82□□□□□ -0.2
PTPRF-211ENST00000467464 MFSD10Q14728 455 aa13.82□□□□□ -0.2
PTPRF-211ENST00000467464 RAB30Q15771 203 aa13.82□□□□□ -0.2
PTPRF-211ENST00000467464 ADCK5Q3MIX3 580 aa13.82□□□□□ -0.2
PTPRF-211ENST00000467464 TSGA10IPQ3SY00 556 aa13.82□□□□□ -0.2
PTPRF-211ENST00000467464 KCNV1Q6PIU1 500 aa13.82□□□□□ -0.2
PTPRF-211ENST00000467464 NFXL1Q6ZNB6 911 aa13.82□□□□□ -0.2
PTPRF-211ENST00000467464 TMTC3Q6ZXV5 915 aa13.82□□□□□ -0.2
PTPRF-211ENST00000467464 DEFB128Q7Z7B8 93 aa13.82□□□□□ -0.2
PTPRF-211ENST00000467464 PHF6Q8IWS0 365 aaKnown RBP eCLIP13.82□□□□□ -0.2
PTPRF-211ENST00000467464 USP38Q8NB14 1042 aa13.82□□□□□ -0.2
PTPRF-211ENST00000467464 SPATA33Q96N06 139 aa13.82□□□□□ -0.2
PTPRF-211ENST00000467464 C16orf70Q9BSU1 422 aa13.82□□□□□ -0.2
PTPRF-211ENST00000467464 NKX2-4Q9H2Z4 354 aa13.82□□□□□ -0.2
PTPRF-211ENST00000467464 TELO2Q9Y4R8 837 aa13.82□□□□□ -0.2
PTPRF-211ENST00000467464 VCANP13611 3396 aa13.82□□□□□ -0.2
PTPRF-211ENST00000467464 SPATA31C2B4DYI2 1134 aa13.81□□□□□ -0.2
PTPRF-211ENST00000467464 PPFIA4O75335 1185 aa13.81□□□□□ -0.2
PTPRF-211ENST00000467464 CALM1P0DP23 149 aa13.81□□□□□ -0.2
PTPRF-211ENST00000467464 CALM2P0DP24 149 aa13.81□□□□□ -0.2
PTPRF-211ENST00000467464 CALM3P0DP25 149 aa13.81□□□□□ -0.2
PTPRF-211ENST00000467464 MYOGP15173 224 aa13.81□□□□□ -0.2
PTPRF-211ENST00000467464 GNAQP50148 359 aa13.81□□□□□ -0.2
PTPRF-211ENST00000467464 RABGGTBP53611 331 aa13.81□□□□□ -0.2
PTPRF-211ENST00000467464 CHMP4BP1P59074 171 aa13.81□□□□□ -0.2
PTPRF-211ENST00000467464 BFSP2Q13515 415 aa13.81□□□□□ -0.2
PTPRF-211ENST00000467464 ADGRE1Q14246 886 aa13.81□□□□□ -0.2
PTPRF-211ENST00000467464 KIAA0753Q2KHM9 967 aa13.81□□□□□ -0.2
PTPRF-211ENST00000467464 TCTN1Q2MV58 587 aa13.81□□□□□ -0.2
PTPRF-211ENST00000467464 APOA5Q6Q788 366 aa13.81□□□□□ -0.2
PTPRF-211ENST00000467464 FANCBQ8NB91 859 aa13.81□□□□□ -0.2
PTPRF-211ENST00000467464 CAGE1Q8TC20 777 aa13.81□□□□□ -0.2
PTPRF-211ENST00000467464 AFAP1L1Q8TED9 768 aa13.81□□□□□ -0.2
PTPRF-211ENST00000467464 ALG1Q9BT22 464 aa13.81□□□□□ -0.2
PTPRF-211ENST00000467464 KATNAL1Q9BW62 490 aa13.81□□□□□ -0.2
PTPRF-211ENST00000467464 SLC4A7Q9Y6M7 1214 aa13.81□□□□□ -0.2
PTPRF-211ENST00000467464 CNTNAP5Q8WYK1 1306 aa13.81□□□□□ -0.2
PTPRF-211ENST00000467464 TANC1Q9C0D5 1861 aa13.8□□□□□ -0.2
PTPRF-211ENST00000467464 KIAA1217Q5T5P2 1943 aa13.8□□□□□ -0.2
PTPRF-211ENST00000467464 hCG_1642624A0A1W2PR95 340 aa13.8□□□□□ -0.2
PTPRF-211ENST00000467464 DLL1O00548 723 aa13.8□□□□□ -0.2
PTPRF-211ENST00000467464 CDC45O75419 566 aa13.8□□□□□ -0.2
PTPRF-211ENST00000467464 STAM2O75886 525 aa13.8□□□□□ -0.2
PTPRF-211ENST00000467464 ZNF200P98182 395 aaPredicted RBP13.8□□□□□ -0.2
PTPRF-211ENST00000467464 PCNX4Q63HM2 1172 aa13.8□□□□□ -0.2
PTPRF-211ENST00000467464 MICU3Q86XE3 530 aa13.8□□□□□ -0.2
PTPRF-211ENST00000467464 KCNB2Q92953 911 aa13.8□□□□□ -0.2
PTPRF-211ENST00000467464 TCEANC2Q96MN5 208 aa13.8□□□□□ -0.2
PTPRF-211ENST00000467464 NEK1Q96PY6 1258 aa13.8□□□□□ -0.2
PTPRF-211ENST00000467464 PRDM12Q9H4Q4 367 aa13.8□□□□□ -0.2
PTPRF-211ENST00000467464 BRPF3Q9ULD4 1205 aa13.8□□□□□ -0.2
PTPRF-211ENST00000467464 NOD1Q9Y239 953 aa13.8□□□□□ -0.2
PTPRF-211ENST00000467464 SLC12A7Q9Y666 1083 aa13.8□□□□□ -0.2
PTPRF-211ENST00000467464 ZBBXA8MT70 800 aa13.79□□□□□ -0.2
PTPRF-211ENST00000467464 FIBPO43427 364 aa13.79□□□□□ -0.2
PTPRF-211ENST00000467464 NBNO60934 754 aa13.79□□□□□ -0.2
PTPRF-211ENST00000467464 ARHGEF15O94989 841 aa13.79□□□□□ -0.2
PTPRF-211ENST00000467464 CXCL10P02778 98 aa13.79□□□□□ -0.2
PTPRF-211ENST00000467464 LGALS2P05162 132 aa13.79□□□□□ -0.2
PTPRF-211ENST00000467464 CKBP12277 381 aa13.79□□□□□ -0.2
PTPRF-211ENST00000467464 SELPP16109 830 aa13.79□□□□□ -0.2
PTPRF-211ENST00000467464 ATP2A2P16615 1042 aaKnown RBP13.79□□□□□ -0.2
PTPRF-211ENST00000467464 PTK7Q13308 1070 aa13.79□□□□□ -0.2
PTPRF-211ENST00000467464 MBTPS1Q14703 1052 aa13.79□□□□□ -0.2
PTPRF-211ENST00000467464 UBE2SQ16763 222 aa13.79□□□□□ -0.2
PTPRF-211ENST00000467464 GNPTABQ3T906 1256 aa13.79□□□□□ -0.2
PTPRF-211ENST00000467464 TYW1BQ6NUM6 668 aa13.79□□□□□ -0.2
PTPRF-211ENST00000467464 XRRA1Q6P2D8 792 aa13.79□□□□□ -0.2
PTPRF-211ENST00000467464 METTL7BQ6UX53 244 aa13.79□□□□□ -0.2
PTPRF-211ENST00000467464 LRRC8DQ7L1W4 858 aa13.79□□□□□ -0.2
PTPRF-211ENST00000467464 C7orf31Q8N865 590 aa13.79□□□□□ -0.2
PTPRF-211ENST00000467464 RETREG2Q8NC44 543 aa13.79□□□□□ -0.2
PTPRF-211ENST00000467464 GPR20Q99678 358 aa13.79□□□□□ -0.2
PTPRF-211ENST00000467464 FAM217BQ9NTX9 383 aaPredicted RBP13.79□□□□□ -0.2
PTPRF-211ENST00000467464 RTEL1Q9NZ71 1219 aa13.79□□□□□ -0.2
PTPRF-211ENST00000467464 SEC63Q9UGP8 760 aaKnown RBP13.79□□□□□ -0.2
PTPRF-211ENST00000467464 MSRAQ9UJ68 235 aa13.79□□□□□ -0.2
PTPRF-211ENST00000467464 PCDHA11Q9Y5I1 949 aa13.79□□□□□ -0.2
PTPRF-211ENST00000467464 ITGB5P18084 799 aa13.78□□□□□ -0.2
PTPRF-211ENST00000467464 RNF20Q5VTR2 975 aa13.78□□□□□ -0.2
PTPRF-211ENST00000467464 WWC2Q6AWC2 1192 aa13.78□□□□□ -0.2
PTPRF-211ENST00000467464 CYFIP1Q7L576 1253 aa13.78□□□□□ -0.2
PTPRF-211ENST00000467464 DHX32Q7L7V1 743 aaKnown RBP13.78□□□□□ -0.2
PTPRF-211ENST00000467464 SERINC5Q86VE9 423 aa13.78□□□□□ -0.2
PTPRF-211ENST00000467464 CCDC82Q8N4S0 544 aa13.78□□□□□ -0.2
PTPRF-211ENST00000467464 CCDC155Q8N6L0 562 aa13.78□□□□□ -0.2
PTPRF-211ENST00000467464 SMARCC2Q8TAQ2 1214 aa13.78□□□□□ -0.2
PTPRF-211ENST00000467464 SENP7Q9BQF6 1050 aa13.78□□□□□ -0.2
PTPRF-211ENST00000467464 PSTPIP2Q9H939 334 aa13.78□□□□□ -0.2
PTPRF-211ENST00000467464 MLXIPQ9HAP2 919 aa13.78□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 12.7 ms