RNA–Protein interactions for RNA: ENST00000465441.1

CSPG5-204, Transcript of chondroitin sulfate proteoglycan 5, humanhuman

TSL 4

Gene CSPG5, Length 593 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSPG5-204ENST00000465441 HOXD8P13378 290 aaPredicted RBP24.14■■□□□ 1.45
CSPG5-204ENST00000465441 LY9Q9HBG7 655 aa24.14■■□□□ 1.45
CSPG5-204ENST00000465441 TET1Q8NFU7 2136 aa24.14■■□□□ 1.45
CSPG5-204ENST00000465441 CKBP12277 381 aa24.13■■□□□ 1.45
CSPG5-204ENST00000465441 SELPP16109 830 aa24.13■■□□□ 1.45
CSPG5-204ENST00000465441 ZNF200P98182 395 aaPredicted RBP24.13■■□□□ 1.45
CSPG5-204ENST00000465441 LRRC8DQ7L1W4 858 aa24.13■■□□□ 1.45
CSPG5-204ENST00000465441 SYMPKQ92797 1274 aaKnown RBP24.13■■□□□ 1.45
CSPG5-204ENST00000465441 MAP3K14Q99558 947 aa24.13■■□□□ 1.45
CSPG5-204ENST00000465441 MYL10Q9BUA6 226 aa24.13■■□□□ 1.45
CSPG5-204ENST00000465441 BCAS3Q9H6U6 928 aa24.13■■□□□ 1.45
CSPG5-204ENST00000465441 MLXIPQ9HAP2 919 aa24.13■■□□□ 1.45
CSPG5-204ENST00000465441 CA3P07451 260 aa24.12■■□□□ 1.45
CSPG5-204ENST00000465441 UBA1P22314 1058 aaKnown RBP24.12■■□□□ 1.45
CSPG5-204ENST00000465441 MRPS9P82933 396 aaKnown RBP24.12■■□□□ 1.45
CSPG5-204ENST00000465441 RBL2Q08999 1139 aa24.12■■□□□ 1.45
CSPG5-204ENST00000465441 ZNF654Q8IZM8 581 aa24.12■■□□□ 1.45
CSPG5-204ENST00000465441 LSG1Q9H089 658 aaKnown RBP24.12■■□□□ 1.45
CSPG5-204ENST00000465441 RFXAPO00287 272 aa24.11■■□□□ 1.45
CSPG5-204ENST00000465441 BAIAP3O94812 1187 aa24.11■■□□□ 1.45
CSPG5-204ENST00000465441 PTK7Q13308 1070 aa24.11■■□□□ 1.45
CSPG5-204ENST00000465441 HIC1Q14526 733 aa24.11■■□□□ 1.45
CSPG5-204ENST00000465441 CASC1Q6TDU7 716 aa24.11■■□□□ 1.45
CSPG5-204ENST00000465441 HERC6Q8IVU3 1022 aa24.11■■□□□ 1.45
CSPG5-204ENST00000465441 CTCFLQ8NI51 663 aaPredicted RBP24.11■■□□□ 1.45
CSPG5-204ENST00000465441 C16orf70Q9BSU1 422 aa24.11■■□□□ 1.45
CSPG5-204ENST00000465441 MTA3Q9BTC8 594 aa24.11■■□□□ 1.45
CSPG5-204ENST00000465441 RTEL1Q9NZ71 1219 aa24.11■■□□□ 1.45
CSPG5-204ENST00000465441 KIF28PB7ZC32 967 aa24.1■■□□□ 1.45
CSPG5-204ENST00000465441 PRC1O43663 620 aa24.1■■□□□ 1.45
CSPG5-204ENST00000465441 NBNO60934 754 aa24.1■■□□□ 1.45
CSPG5-204ENST00000465441 PARNO95453 639 aaKnown RBP24.1■■□□□ 1.45
CSPG5-204ENST00000465441 SMARCA1P28370 1054 aa24.1■■□□□ 1.45
CSPG5-204ENST00000465441 COL9A3Q14050 684 aaPredicted RBP24.1■■□□□ 1.45
CSPG5-204ENST00000465441 TRIM71Q2Q1W2 868 aaKnown RBP24.1■■□□□ 1.45
CSPG5-204ENST00000465441 TJAP1Q5JTD0 557 aa24.1■■□□□ 1.45
CSPG5-204ENST00000465441 WNT8BQ93098 351 aa24.1■■□□□ 1.45
CSPG5-204ENST00000465441 SPZ1Q9BXG8 430 aa24.1■■□□□ 1.45
CSPG5-204ENST00000465441 CERS4Q9HA82 394 aa24.1■■□□□ 1.45
CSPG5-204ENST00000465441 RBAK-RBAKDNI3L0D1 243 aa24.09■■□□□ 1.45
CSPG5-204ENST00000465441 DDAH1O94760 285 aa24.09■■□□□ 1.45
CSPG5-204ENST00000465441 CXCL10P02778 98 aa24.09■■□□□ 1.45
CSPG5-204ENST00000465441 ICAM3P32942 547 aa24.09■■□□□ 1.45
CSPG5-204ENST00000465441 KIF5BP33176 963 aa24.09■■□□□ 1.45
CSPG5-204ENST00000465441 MCM5P33992 734 aa24.09■■□□□ 1.45
CSPG5-204ENST00000465441 TMTC2Q8N394 836 aa24.09■■□□□ 1.45
CSPG5-204ENST00000465441 RRP36Q96EU6 259 aaKnown RBP24.09■■□□□ 1.45
CSPG5-204ENST00000465441 TANC1Q9C0D5 1861 aa24.09■■□□□ 1.45
CSPG5-204ENST00000465441 SPATA31C2B4DYI2 1134 aa24.08■■□□□ 1.45
CSPG5-204ENST00000465441 SH2B2O14492 632 aaPredicted RBP24.08■■□□□ 1.45
CSPG5-204ENST00000465441 SLC27A2O14975 620 aa24.08■■□□□ 1.45
CSPG5-204ENST00000465441 STAM2O75886 525 aa24.08■■□□□ 1.45
CSPG5-204ENST00000465441 ARHGEF15O94989 841 aa24.08■■□□□ 1.45
CSPG5-204ENST00000465441 NECTIN1Q15223 517 aa24.08■■□□□ 1.45
CSPG5-204ENST00000465441 TCTN1Q2MV58 587 aa24.08■■□□□ 1.45
CSPG5-204ENST00000465441 ZNF618Q5T7W0 954 aa24.08■■□□□ 1.45
CSPG5-204ENST00000465441 CNKSR3Q6P9H4 555 aa24.08■■□□□ 1.45
CSPG5-204ENST00000465441 TRAF7Q6Q0C0 670 aa24.08■■□□□ 1.45
CSPG5-204ENST00000465441 USP17L6PQ6QN14 398 aa24.08■■□□□ 1.45
CSPG5-204ENST00000465441 NFXL1Q6ZNB6 911 aa24.08■■□□□ 1.45
CSPG5-204ENST00000465441 SRBD1Q8N5C6 995 aaKnown RBP24.08■■□□□ 1.45
CSPG5-204ENST00000465441 SMARCC2Q8TAQ2 1214 aa24.08■■□□□ 1.45
CSPG5-204ENST00000465441 ATXN2LQ8WWM7 1075 aaKnown RBP24.08■■□□□ 1.45
CSPG5-204ENST00000465441 TMEM87BQ96K49 555 aa24.08■■□□□ 1.45
CSPG5-204ENST00000465441 INPP4AQ96PE3 977 aaPredicted RBP24.08■■□□□ 1.45
CSPG5-204ENST00000465441 LZTS2Q9BRK4 669 aa24.08■■□□□ 1.45
CSPG5-204ENST00000465441 ESYT1Q9BSJ8 1104 aa24.08■■□□□ 1.45
CSPG5-204ENST00000465441 FRMPD4Q14CM0 1322 aa24.08■■□□□ 1.44
CSPG5-204ENST00000465441 CUL9Q8IWT3 2517 aa24.07■■□□□ 1.44
CSPG5-204ENST00000465441 CCDC69A6NI79 296 aa24.07■■□□□ 1.44
CSPG5-204ENST00000465441 MEIS2O14770 477 aa24.07■■□□□ 1.44
CSPG5-204ENST00000465441 PLEKHA8P1O95397 391 aa24.07■■□□□ 1.44
CSPG5-204ENST00000465441 KCNJ6P48051 423 aa24.07■■□□□ 1.44
CSPG5-204ENST00000465441 GNAQP50148 359 aa24.07■■□□□ 1.44
CSPG5-204ENST00000465441 WDR5P61964 334 aaKnown RBP24.07■■□□□ 1.44
CSPG5-204ENST00000465441 TAP1Q03518 808 aa24.07■■□□□ 1.44
CSPG5-204ENST00000465441 SEMA3FQ13275 785 aa24.07■■□□□ 1.44
CSPG5-204ENST00000465441 GNPTABQ3T906 1256 aa24.07■■□□□ 1.44
CSPG5-204ENST00000465441 CMTR1Q8N1G2 835 aaKnown RBP24.07■■□□□ 1.44
CSPG5-204ENST00000465441 VCANP13611 3396 aa24.07■■□□□ 1.44
CSPG5-204ENST00000465441 CHD9Q3L8U1 2897 aa24.07■■□□□ 1.44
CSPG5-204ENST00000465441 H3BRB1 525 aa24.06■■□□□ 1.44
CSPG5-204ENST00000465441 TLL1O43897 1013 aa24.06■■□□□ 1.44
CSPG5-204ENST00000465441 RXRAP19793 462 aa24.06■■□□□ 1.44
CSPG5-204ENST00000465441 NEDD9Q14511 834 aa24.06■■□□□ 1.44
CSPG5-204ENST00000465441 CREB3L3Q68CJ9 461 aa24.06■■□□□ 1.44
CSPG5-204ENST00000465441 CYFIP1Q7L576 1253 aa24.06■■□□□ 1.44
CSPG5-204ENST00000465441 TMCO2Q7Z6W1 182 aaPredicted RBP24.06■■□□□ 1.44
CSPG5-204ENST00000465441 CUL5Q93034 780 aa24.06■■□□□ 1.44
CSPG5-204ENST00000465441 TUT1Q9H6E5 874 aaKnown RBP24.06■■□□□ 1.44
CSPG5-204ENST00000465441 THEGQ9P2T0 379 aa24.06■■□□□ 1.44
CSPG5-204ENST00000465441 EPOPA6NHQ4 379 aa24.05■■□□□ 1.44
CSPG5-204ENST00000465441 PIK3CDO00329 1044 aa24.05■■□□□ 1.44
CSPG5-204ENST00000465441 LGALS2P05162 132 aa24.05■■□□□ 1.44
CSPG5-204ENST00000465441 POU3F3P20264 500 aaPredicted RBP24.05■■□□□ 1.44
CSPG5-204ENST00000465441 LIFRP42702 1097 aa24.05■■□□□ 1.44
CSPG5-204ENST00000465441 DEFB103AP81534 67 aa24.05■■□□□ 1.44
CSPG5-204ENST00000465441 MICALL1Q8N3F8 863 aa24.05■■□□□ 1.44
CSPG5-204ENST00000465441 ARNTL2Q8WYA1 636 aa24.05■■□□□ 1.44
CSPG5-204ENST00000465441 ASB2Q96Q27 587 aa24.05■■□□□ 1.44
Retrieved 100 of 20,778 RNA–protein pairs in 17.8 ms