RNA–Protein interactions for RNA: ENST00000461159.6

HDAC9-219, Transcript of histone deacetylase 9, humanhuman

TSL 2

Gene HDAC9, Length 2,557 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC9-219ENST00000461159 PSME4Q14997 1843 aa9.42□□□□□ -0.9
HDAC9-219ENST00000461159 USP17L5A8MUK1 530 aa9.42□□□□□ -0.9
HDAC9-219ENST00000461159 E2F6O75461 281 aa9.42□□□□□ -0.9
HDAC9-219ENST00000461159 STK10O94804 968 aaKnown RBP9.42□□□□□ -0.9
HDAC9-219ENST00000461159 TBC1D8O95759 1140 aa9.42□□□□□ -0.9
HDAC9-219ENST00000461159 IFNAR1P17181 557 aa9.42□□□□□ -0.9
HDAC9-219ENST00000461159 CDR1P51861 262 aa9.42□□□□□ -0.9
HDAC9-219ENST00000461159 HIRAP54198 1017 aaPredicted RBP9.42□□□□□ -0.9
HDAC9-219ENST00000461159 GNG11P61952 73 aa9.42□□□□□ -0.9
HDAC9-219ENST00000461159 SSRP1Q08945 709 aaKnown RBP9.42□□□□□ -0.9
HDAC9-219ENST00000461159 ZYXQ15942 572 aaKnown RBP9.42□□□□□ -0.9
HDAC9-219ENST00000461159 KIF4BQ2VIQ3 1234 aa9.42□□□□□ -0.9
HDAC9-219ENST00000461159 ANGEL2Q5VTE6 544 aaKnown RBP9.42□□□□□ -0.9
HDAC9-219ENST00000461159 CPLX2Q6PUV4 134 aaKnown RBP9.42□□□□□ -0.9
HDAC9-219ENST00000461159 CCDC80Q76M96 950 aa9.42□□□□□ -0.9
HDAC9-219ENST00000461159 MIPOL1Q8TD10 442 aa9.42□□□□□ -0.9
HDAC9-219ENST00000461159 RABGGTAQ92696 567 aa9.42□□□□□ -0.9
HDAC9-219ENST00000461159 DHX36Q9H2U1 1008 aaKnown RBP9.42□□□□□ -0.9
HDAC9-219ENST00000461159 MTMR4Q9NYA4 1195 aa9.42□□□□□ -0.9
HDAC9-219ENST00000461159 VPS54Q9P1Q0 977 aa9.42□□□□□ -0.9
HDAC9-219ENST00000461159 VWA3AA6NCI4 1184 aa9.41□□□□□ -0.9
HDAC9-219ENST00000461159 MAP3K9P80192 1104 aa9.41□□□□□ -0.9
HDAC9-219ENST00000461159 KIF23Q02241 960 aaPredicted RBP9.41□□□□□ -0.9
HDAC9-219ENST00000461159 SNX1Q13596 522 aa9.41□□□□□ -0.9
HDAC9-219ENST00000461159 PKN1Q16512 942 aa9.41□□□□□ -0.9
HDAC9-219ENST00000461159 PREPLQ4J6C6 727 aaPredicted RBP9.41□□□□□ -0.9
HDAC9-219ENST00000461159 KRT40Q6A162 431 aa9.41□□□□□ -0.9
HDAC9-219ENST00000461159 ISM2Q6H9L7 571 aa9.41□□□□□ -0.9
HDAC9-219ENST00000461159 DGKHQ86XP1 1220 aa9.41□□□□□ -0.9
HDAC9-219ENST00000461159 SPICE1Q8N0Z3 855 aa9.41□□□□□ -0.9
HDAC9-219ENST00000461159 GOLGA1Q92805 767 aa9.41□□□□□ -0.9
HDAC9-219ENST00000461159 DHRS1Q96LJ7 313 aa9.41□□□□□ -0.9
HDAC9-219ENST00000461159 HSD3B7Q9H2F3 369 aa9.41□□□□□ -0.9
HDAC9-219ENST00000461159 POLR2AP24928 1970 aaKnown RBP9.41□□□□□ -0.9
HDAC9-219ENST00000461159 H7C1D1 291 aa9.41□□□□□ -0.9
HDAC9-219ENST00000461159 STX10O60499 249 aa9.41□□□□□ -0.9
HDAC9-219ENST00000461159 PPP6R2O75170 966 aa9.41□□□□□ -0.9
HDAC9-219ENST00000461159 KRT38O76015 456 aa9.41□□□□□ -0.9
HDAC9-219ENST00000461159 SLC16A2P36021 539 aa9.41□□□□□ -0.9
HDAC9-219ENST00000461159 NBPF12Q5TAG4 269 aaPredicted RBP9.41□□□□□ -0.9
HDAC9-219ENST00000461159 KCTD1Q719H9 257 aa9.41□□□□□ -0.9
HDAC9-219ENST00000461159 OTUD6AQ7L8S5 288 aa9.41□□□□□ -0.9
HDAC9-219ENST00000461159 ARL10Q8N8L6 244 aa9.41□□□□□ -0.9
HDAC9-219ENST00000461159 NEK9Q8TD19 979 aa9.41□□□□□ -0.9
HDAC9-219ENST00000461159 FAM151AQ8WW52 585 aa9.41□□□□□ -0.9
HDAC9-219ENST00000461159 DPF2Q92785 391 aa9.41□□□□□ -0.9
HDAC9-219ENST00000461159 FAM81BQ96LP2 452 aa9.41□□□□□ -0.9
HDAC9-219ENST00000461159 NUP88Q99567 741 aaPredicted RBP9.41□□□□□ -0.9
HDAC9-219ENST00000461159 NACA2Q9H009 215 aa9.41□□□□□ -0.9
HDAC9-219ENST00000461159 KIF9Q9HAQ2 790 aa9.41□□□□□ -0.9
HDAC9-219ENST00000461159 GPCPD1Q9NPB8 672 aa9.41□□□□□ -0.9
HDAC9-219ENST00000461159 HOOK1Q9UJC3 728 aaKnown RBP9.41□□□□□ -0.9
HDAC9-219ENST00000461159 BARX2Q9UMQ3 279 aaPredicted RBP9.41□□□□□ -0.9
HDAC9-219ENST00000461159 MRFAP1Q9Y605 127 aa9.41□□□□□ -0.9
HDAC9-219ENST00000461159 MYH6P13533 1939 aa9.41□□□□□ -0.9
HDAC9-219ENST00000461159 ARFGEF1Q9Y6D6 1849 aa9.41□□□□□ -0.9
HDAC9-219ENST00000461159 BRCA2P51587 3418 aa9.4□□□□□ -0.9
HDAC9-219ENST00000461159 CYTH3O43739 400 aa9.4□□□□□ -0.9
HDAC9-219ENST00000461159 ENTPD3O75355 529 aa9.4□□□□□ -0.9
HDAC9-219ENST00000461159 EEF2P13639 858 aaKnown RBP9.4□□□□□ -0.9
HDAC9-219ENST00000461159 MARCKSP29966 332 aaPredicted RBP9.4□□□□□ -0.9
HDAC9-219ENST00000461159 ECE1P42892 770 aa9.4□□□□□ -0.9
HDAC9-219ENST00000461159 LAMB3Q13751 1172 aa9.4□□□□□ -0.9
HDAC9-219ENST00000461159 RSRC2Q7L4I2 434 aaKnown RBP9.4□□□□□ -0.9
HDAC9-219ENST00000461159 FAM81AQ8TBF8 368 aa9.4□□□□□ -0.9
HDAC9-219ENST00000461159 OXER1Q8TDS5 423 aa9.4□□□□□ -0.9
HDAC9-219ENST00000461159 GPKOWQ92917 476 aaPredicted RBP eCLIP9.4□□□□□ -0.9
HDAC9-219ENST00000461159 SAAL1Q96ER3 474 aa9.4□□□□□ -0.9
HDAC9-219ENST00000461159 ZBED3Q96IU2 234 aaPredicted RBP9.4□□□□□ -0.9
HDAC9-219ENST00000461159 JPH2Q9BR39 696 aaPredicted RBP9.4□□□□□ -0.9
HDAC9-219ENST00000461159 DEFB129Q9H1M3 183 aa9.4□□□□□ -0.9
HDAC9-219ENST00000461159 GGA3Q9NZ52 723 aa9.4□□□□□ -0.9
HDAC9-219ENST00000461159 GPRC5DQ9NZD1 345 aa9.4□□□□□ -0.9
HDAC9-219ENST00000461159 MAD2L2Q9UI95 211 aa9.4□□□□□ -0.9
HDAC9-219ENST00000461159 HPSEQ9Y251 543 aa9.4□□□□□ -0.9
HDAC9-219ENST00000461159 ATP8A1Q9Y2Q0 1164 aa9.4□□□□□ -0.9
HDAC9-219ENST00000461159 CTDP1Q9Y5B0 961 aaPredicted RBP9.4□□□□□ -0.9
HDAC9-219ENST00000461159 MYH8P13535 1937 aa9.4□□□□□ -0.9
HDAC9-219ENST00000461159 UNCXA6NJT0 531 aa9.4□□□□□ -0.9
HDAC9-219ENST00000461159 ERLIN1O75477 346 aa9.4□□□□□ -0.9
HDAC9-219ENST00000461159 HARSP12081 509 aaKnown RBP9.4□□□□□ -0.9
HDAC9-219ENST00000461159 KCNA2P16389 499 aa9.4□□□□□ -0.9
HDAC9-219ENST00000461159 ZNF280AP59817 542 aaPredicted RBP9.4□□□□□ -0.9
HDAC9-219ENST00000461159 NR5A1Q13285 461 aa9.4□□□□□ -0.9
HDAC9-219ENST00000461159 DGKZQ13574 1117 aa9.4□□□□□ -0.9
HDAC9-219ENST00000461159 BRD3Q15059 726 aa9.4□□□□□ -0.9
HDAC9-219ENST00000461159 ABCB5Q2M3G0 1257 aa9.4□□□□□ -0.9
HDAC9-219ENST00000461159 CDCA2Q69YH5 1023 aaPredicted RBP9.4□□□□□ -0.9
HDAC9-219ENST00000461159 TTBK2Q6IQ55 1244 aa9.4□□□□□ -0.9
HDAC9-219ENST00000461159 TMTC3Q6ZXV5 915 aa9.4□□□□□ -0.9
HDAC9-219ENST00000461159 TRIM22Q8IYM9 498 aa9.4□□□□□ -0.9
HDAC9-219ENST00000461159 PDILTQ8N807 584 aa9.4□□□□□ -0.9
HDAC9-219ENST00000461159 TAF4BQ92750 862 aa9.4□□□□□ -0.9
HDAC9-219ENST00000461159 PARD6BQ9BYG5 372 aa9.4□□□□□ -0.9
HDAC9-219ENST00000461159 GLIS2Q9BZE0 524 aaPredicted RBP9.4□□□□□ -0.9
HDAC9-219ENST00000461159 JADE2Q9NQC1 790 aa9.4□□□□□ -0.9
HDAC9-219ENST00000461159 SBF1O95248 1867 aa9.4□□□□□ -0.91
HDAC9-219ENST00000461159 FAM237AA0A1B0GTK4 181 aa9.39□□□□□ -0.91
HDAC9-219ENST00000461159 CCDC151A5D8V7 595 aa9.39□□□□□ -0.91
HDAC9-219ENST00000461159 FAM205CA6NFA0 338 aa9.39□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 24.2 ms