RNA–Protein interactions for RNA: ENST00000460483.5

SMNDC1-203, Transcript of survival motor neuron domain containing 1, humanhuman

TSL 3

Gene SMNDC1, Length 753 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMNDC1-203ENST00000460483 NPLOC4Q8TAT6 608 aa12.5□□□□□ -0.41
SMNDC1-203ENST00000460483 FAM20AQ96MK3 541 aa12.5□□□□□ -0.41
SMNDC1-203ENST00000460483 MXRA8Q9BRK3 442 aa12.5□□□□□ -0.41
SMNDC1-203ENST00000460483 SDF4Q9BRK5 362 aa12.5□□□□□ -0.41
SMNDC1-203ENST00000460483 HMX1Q9NP08 348 aaPredicted RBP12.5□□□□□ -0.41
SMNDC1-203ENST00000460483 JADE2Q9NQC1 790 aa12.5□□□□□ -0.41
SMNDC1-203ENST00000460483 GJB4Q9NTQ9 266 aa12.5□□□□□ -0.41
SMNDC1-203ENST00000460483 TBC1D22BQ9NU19 505 aa12.5□□□□□ -0.41
SMNDC1-203ENST00000460483 COL20A1Q9P218 1284 aa12.5□□□□□ -0.41
SMNDC1-203ENST00000460483 DDX25Q9UHL0 483 aaKnown RBP12.5□□□□□ -0.41
SMNDC1-203ENST00000460483 GABRQQ9UN88 632 aa12.5□□□□□ -0.41
SMNDC1-203ENST00000460483 BOLA1Q9Y3E2 137 aa12.5□□□□□ -0.41
SMNDC1-203ENST00000460483 STK24Q9Y6E0 443 aa12.5□□□□□ -0.41
SMNDC1-203ENST00000460483 MRVI1Q9Y6F6 885 aa12.5□□□□□ -0.41
SMNDC1-203ENST00000460483 BRD1O95696 1058 aa12.49□□□□□ -0.41
SMNDC1-203ENST00000460483 F13A1P00488 732 aa12.49□□□□□ -0.41
SMNDC1-203ENST00000460483 AKR1A1P14550 325 aa12.49□□□□□ -0.41
SMNDC1-203ENST00000460483 TAL1P17542 331 aaPredicted RBP12.49□□□□□ -0.41
SMNDC1-203ENST00000460483 Q4G0T1 1027 aa12.49□□□□□ -0.41
SMNDC1-203ENST00000460483 TTC38Q5R3I4 469 aa12.49□□□□□ -0.41
SMNDC1-203ENST00000460483 RASGRP4Q8TDF6 673 aa12.49□□□□□ -0.41
SMNDC1-203ENST00000460483 OXER1Q8TDS5 423 aa12.49□□□□□ -0.41
SMNDC1-203ENST00000460483 TNFRSF25Q93038 417 aa12.49□□□□□ -0.41
SMNDC1-203ENST00000460483 INPP4AQ96PE3 977 aaPredicted RBP12.49□□□□□ -0.41
SMNDC1-203ENST00000460483 SENP7Q9BQF6 1050 aa12.49□□□□□ -0.41
SMNDC1-203ENST00000460483 ZHX1Q9UKY1 873 aaPredicted RBP12.49□□□□□ -0.41
SMNDC1-203ENST00000460483 RLFQ13129 1914 aa12.49□□□□□ -0.41
SMNDC1-203ENST00000460483 MEIS1O00470 390 aa12.48□□□□□ -0.41
SMNDC1-203ENST00000460483 NEMFO60524 1076 aa12.48□□□□□ -0.41
SMNDC1-203ENST00000460483 CTGFP29279 349 aa12.48□□□□□ -0.41
SMNDC1-203ENST00000460483 CNGA1P29973 690 aa12.48□□□□□ -0.41
SMNDC1-203ENST00000460483 ICAM3P32942 547 aa12.48□□□□□ -0.41
SMNDC1-203ENST00000460483 KRT85P78386 507 aa12.48□□□□□ -0.41
SMNDC1-203ENST00000460483 TMEM266Q2M3C6 531 aa12.48□□□□□ -0.41
SMNDC1-203ENST00000460483 PRR16Q569H4 304 aa12.48□□□□□ -0.41
SMNDC1-203ENST00000460483 MYSM1Q5VVJ2 828 aa12.48□□□□□ -0.41
SMNDC1-203ENST00000460483 SEPT14Q6ZU15 432 aa12.48□□□□□ -0.41
SMNDC1-203ENST00000460483 FERMT3Q86UX7 667 aa12.48□□□□□ -0.41
SMNDC1-203ENST00000460483 PLA2G4DQ86XP0 818 aa12.48□□□□□ -0.41
SMNDC1-203ENST00000460483 TNPO1Q92973 898 aaKnown RBP12.48□□□□□ -0.41
SMNDC1-203ENST00000460483 RIT2Q99578 217 aa12.48□□□□□ -0.41
SMNDC1-203ENST00000460483 WDR11Q9BZH6 1224 aa12.48□□□□□ -0.41
SMNDC1-203ENST00000460483 Q9Y3F1 56 aa12.48□□□□□ -0.41
SMNDC1-203ENST00000460483 UBIAD1Q9Y5Z9 338 aa12.48□□□□□ -0.41
SMNDC1-203ENST00000460483 PTCH2Q9Y6C5 1203 aa12.48□□□□□ -0.41
SMNDC1-203ENST00000460483 SPATA31C2B4DYI2 1134 aa12.47□□□□□ -0.41
SMNDC1-203ENST00000460483 SEPT4O43236 478 aa12.47□□□□□ -0.41
SMNDC1-203ENST00000460483 ZEB2O60315 1214 aa12.47□□□□□ -0.41
SMNDC1-203ENST00000460483 TXNP10599 105 aaKnown RBP12.47□□□□□ -0.41
SMNDC1-203ENST00000460483 RARBP10826 455 aa12.47□□□□□ -0.41
SMNDC1-203ENST00000460483 ATP2B1P20020 1258 aa12.47□□□□□ -0.41
SMNDC1-203ENST00000460483 CYP2C19P33261 490 aa12.47□□□□□ -0.41
SMNDC1-203ENST00000460483 TNFAIP2Q03169 654 aa12.47□□□□□ -0.41
SMNDC1-203ENST00000460483 LAMC2Q13753 1193 aa12.47□□□□□ -0.41
SMNDC1-203ENST00000460483 SF3A1Q15459 793 aaKnown RBP12.47□□□□□ -0.41
SMNDC1-203ENST00000460483 CALCRLQ16602 461 aa12.47□□□□□ -0.41
SMNDC1-203ENST00000460483 CRYGNQ8WXF5 182 aa12.47□□□□□ -0.41
SMNDC1-203ENST00000460483 TRIB2Q92519 343 aa12.47□□□□□ -0.41
SMNDC1-203ENST00000460483 PGBD1Q96JS3 809 aa12.47□□□□□ -0.41
SMNDC1-203ENST00000460483 ZNF577Q9BSK1 485 aa12.47□□□□□ -0.41
SMNDC1-203ENST00000460483 SCAND2PQ9GZW5 306 aaPredicted RBP12.47□□□□□ -0.41
SMNDC1-203ENST00000460483 AP5M1Q9H0R1 490 aa12.47□□□□□ -0.41
SMNDC1-203ENST00000460483 MLXIPQ9HAP2 919 aa12.47□□□□□ -0.41
SMNDC1-203ENST00000460483 KCNH7Q9NS40 1196 aa12.47□□□□□ -0.41
SMNDC1-203ENST00000460483 RTEL1Q9NZ71 1219 aa12.47□□□□□ -0.41
SMNDC1-203ENST00000460483 ZNF236Q9UL36 1845 aa12.46□□□□□ -0.41
SMNDC1-203ENST00000460483 RBM47A0AV96 593 aaKnown RBP12.46□□□□□ -0.41
SMNDC1-203ENST00000460483 IPO5O00410 1097 aaKnown RBP12.46□□□□□ -0.41
SMNDC1-203ENST00000460483 NOP56O00567 594 aaKnown RBP12.46□□□□□ -0.41
SMNDC1-203ENST00000460483 DKC1O60832 514 aaKnown RBP eCLIP12.46□□□□□ -0.41
SMNDC1-203ENST00000460483 DTNBO60941 627 aa12.46□□□□□ -0.41
SMNDC1-203ENST00000460483 SNAI1O95863 264 aaPredicted RBP12.46□□□□□ -0.41
SMNDC1-203ENST00000460483 INHAP05111 366 aa12.46□□□□□ -0.41
SMNDC1-203ENST00000460483 MCM7P33993 719 aa12.46□□□□□ -0.41
SMNDC1-203ENST00000460483 CPT1AP50416 773 aa12.46□□□□□ -0.41
SMNDC1-203ENST00000460483 MRPS9P82933 396 aaKnown RBP12.46□□□□□ -0.41
SMNDC1-203ENST00000460483 RESTQ13127 1097 aa12.46□□□□□ -0.41
SMNDC1-203ENST00000460483 CCL14Q16627 93 aa12.46□□□□□ -0.41
SMNDC1-203ENST00000460483 DUSP28Q4G0W2 176 aa12.46□□□□□ -0.41
SMNDC1-203ENST00000460483 ARL6IP4Q66PJ3 421 aaKnown RBP12.46□□□□□ -0.41
SMNDC1-203ENST00000460483 EEPD1Q7L9B9 569 aa12.46□□□□□ -0.41
SMNDC1-203ENST00000460483 DHX37Q8IY37 1157 aaKnown RBP12.46□□□□□ -0.41
SMNDC1-203ENST00000460483 KCNG4Q8TDN1 519 aa12.46□□□□□ -0.41
SMNDC1-203ENST00000460483 SHISA4Q96DD7 197 aa12.46□□□□□ -0.41
SMNDC1-203ENST00000460483 PURBQ96QR8 312 aaKnown RBP12.46□□□□□ -0.41
SMNDC1-203ENST00000460483 PCDHA12Q9UN75 941 aa12.46□□□□□ -0.41
SMNDC1-203ENST00000460483 NFASCO94856 1347 aa12.45□□□□□ -0.42
SMNDC1-203ENST00000460483 KPNA6O60684 536 aa12.45□□□□□ -0.42
SMNDC1-203ENST00000460483 GAS7O60861 476 aa12.45□□□□□ -0.42
SMNDC1-203ENST00000460483 DUSP11O75319 330 aaKnown RBP12.45□□□□□ -0.42
SMNDC1-203ENST00000460483 GH1P01241 217 aa12.45□□□□□ -0.42
SMNDC1-203ENST00000460483 ELNP15502 786 aa12.45□□□□□ -0.42
SMNDC1-203ENST00000460483 ITGB5P18084 799 aa12.45□□□□□ -0.42
SMNDC1-203ENST00000460483 SFNP31947 248 aa12.45□□□□□ -0.42
SMNDC1-203ENST00000460483 PRPHP41219 470 aa12.45□□□□□ -0.42
SMNDC1-203ENST00000460483 KRT76Q01546 638 aa12.45□□□□□ -0.42
SMNDC1-203ENST00000460483 CACNB2Q08289 660 aaPredicted RBP12.45□□□□□ -0.42
SMNDC1-203ENST00000460483 CCDC144BQ3MJ40 725 aa12.45□□□□□ -0.42
SMNDC1-203ENST00000460483 MAP3K21Q5TCX8 1036 aa12.45□□□□□ -0.42
SMNDC1-203ENST00000460483 ANO1Q5XXA6 986 aa12.45□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 50.7 ms