RNA–Protein interactions for RNA: ENST00000460235.1

HDAC4-206, Transcript of histone deacetylase 4, humanhuman

TSL 5

Gene HDAC4, Length 343 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC4-206ENST00000460235 CASP8AP2Q9UKL3 1982 aa13.95□□□□□ -0.18
HDAC4-206ENST00000460235 RBM47A0AV96 593 aaKnown RBP13.95□□□□□ -0.18
HDAC4-206ENST00000460235 GOLGA6L4A6NEF3 574 aa13.95□□□□□ -0.18
HDAC4-206ENST00000460235 FAM86B1E9PN63 330 aa13.95□□□□□ -0.18
HDAC4-206ENST00000460235 IPO5O00410 1097 aaKnown RBP13.95□□□□□ -0.18
HDAC4-206ENST00000460235 GAS7O60861 476 aa13.95□□□□□ -0.18
HDAC4-206ENST00000460235 FAM86B2P0C5J1 330 aa13.95□□□□□ -0.18
HDAC4-206ENST00000460235 OR52Z1P0C646 297 aa13.95□□□□□ -0.18
HDAC4-206ENST00000460235 AKR1A1P14550 325 aa13.95□□□□□ -0.18
HDAC4-206ENST00000460235 NASPP49321 788 aaPredicted RBP13.95□□□□□ -0.18
HDAC4-206ENST00000460235 PTGDRQ13258 359 aa13.95□□□□□ -0.18
HDAC4-206ENST00000460235 SLC39A14Q15043 492 aa13.95□□□□□ -0.18
HDAC4-206ENST00000460235 SLC9C1Q4G0N8 1177 aa13.95□□□□□ -0.18
HDAC4-206ENST00000460235 EARS2Q5JPH6 523 aaKnown RBP13.95□□□□□ -0.18
HDAC4-206ENST00000460235 DTHD1Q6ZMT9 781 aa13.95□□□□□ -0.18
HDAC4-206ENST00000460235 ERMNQ8TAM6 284 aa13.95□□□□□ -0.18
HDAC4-206ENST00000460235 SPATA32Q96LK8 384 aa13.95□□□□□ -0.18
HDAC4-206ENST00000460235 FGD4Q96M96 766 aa13.95□□□□□ -0.18
HDAC4-206ENST00000460235 PURBQ96QR8 312 aaKnown RBP13.95□□□□□ -0.18
HDAC4-206ENST00000460235 TEKT3Q9BXF9 490 aa13.95□□□□□ -0.18
HDAC4-206ENST00000460235 AP5M1Q9H0R1 490 aa13.95□□□□□ -0.18
HDAC4-206ENST00000460235 MLXIPQ9HAP2 919 aa13.95□□□□□ -0.18
HDAC4-206ENST00000460235 HMX1Q9NP08 348 aaPredicted RBP13.95□□□□□ -0.18
HDAC4-206ENST00000460235 PCDHA12Q9UN75 941 aa13.95□□□□□ -0.18
HDAC4-206ENST00000460235 ZDHHC9Q9Y397 364 aa13.95□□□□□ -0.18
HDAC4-206ENST00000460235 IGLV3-22A0A075B6J6 115 aa13.94□□□□□ -0.18
HDAC4-206ENST00000460235 DKC1O60832 514 aaKnown RBP eCLIP13.94□□□□□ -0.18
HDAC4-206ENST00000460235 PPP6R2O75170 966 aa13.94□□□□□ -0.18
HDAC4-206ENST00000460235 TDP2O95551 362 aa13.94□□□□□ -0.18
HDAC4-206ENST00000460235 SNAI1O95863 264 aaPredicted RBP13.94□□□□□ -0.18
HDAC4-206ENST00000460235 GH1P01241 217 aa13.94□□□□□ -0.18
HDAC4-206ENST00000460235 TXNP10599 105 aaKnown RBP13.94□□□□□ -0.18
HDAC4-206ENST00000460235 ITGB5P18084 799 aa13.94□□□□□ -0.18
HDAC4-206ENST00000460235 SFNP31947 248 aa13.94□□□□□ -0.18
HDAC4-206ENST00000460235 CYP2C19P33261 490 aa13.94□□□□□ -0.18
HDAC4-206ENST00000460235 TOB1P50616 345 aaPredicted RBP13.94□□□□□ -0.18
HDAC4-206ENST00000460235 ATP2C1P98194 919 aaPredicted RBP13.94□□□□□ -0.18
HDAC4-206ENST00000460235 KRT76Q01546 638 aa13.94□□□□□ -0.18
HDAC4-206ENST00000460235 TNFAIP2Q03169 654 aa13.94□□□□□ -0.18
HDAC4-206ENST00000460235 LAMC2Q13753 1193 aa13.94□□□□□ -0.18
HDAC4-206ENST00000460235 PDIA5Q14554 519 aa13.94□□□□□ -0.18
HDAC4-206ENST00000460235 LRCH2Q5VUJ6 765 aa13.94□□□□□ -0.18
HDAC4-206ENST00000460235 EEPD1Q7L9B9 569 aa13.94□□□□□ -0.18
HDAC4-206ENST00000460235 RDM1Q8NG50 284 aa13.94□□□□□ -0.18
HDAC4-206ENST00000460235 IL31RAQ8NI17 732 aa13.94□□□□□ -0.18
HDAC4-206ENST00000460235 TRIB2Q92519 343 aa13.94□□□□□ -0.18
HDAC4-206ENST00000460235 AK8Q96MA6 479 aa13.94□□□□□ -0.18
HDAC4-206ENST00000460235 AGO4Q9HCK5 861 aaKnown RBP13.94□□□□□ -0.18
HDAC4-206ENST00000460235 PCDHB6Q9Y5E3 794 aa13.94□□□□□ -0.18
HDAC4-206ENST00000460235 FAM205CA6NFA0 338 aa13.93□□□□□ -0.18
HDAC4-206ENST00000460235 NOP56O00567 594 aaKnown RBP13.93□□□□□ -0.18
HDAC4-206ENST00000460235 ADAMTS3O15072 1205 aa13.93□□□□□ -0.18
HDAC4-206ENST00000460235 SPTLC2O15270 562 aa13.93□□□□□ -0.18
HDAC4-206ENST00000460235 SEPT4O43236 478 aa13.93□□□□□ -0.18
HDAC4-206ENST00000460235 SLC26A4O43511 780 aa13.93□□□□□ -0.18
HDAC4-206ENST00000460235 ZEB2O60315 1214 aa13.93□□□□□ -0.18
HDAC4-206ENST00000460235 PRKAR2AP13861 404 aaKnown RBP13.93□□□□□ -0.18
HDAC4-206ENST00000460235 PTMSP20962 102 aa13.93□□□□□ -0.18
HDAC4-206ENST00000460235 CNGA1P29973 690 aa13.93□□□□□ -0.18
HDAC4-206ENST00000460235 TXLNAP40222 546 aa13.93□□□□□ -0.18
HDAC4-206ENST00000460235 DNM1Q05193 864 aaKnown RBP13.93□□□□□ -0.18
HDAC4-206ENST00000460235 CCL14Q16627 93 aa13.93□□□□□ -0.18
HDAC4-206ENST00000460235 CCDC144BQ3MJ40 725 aa13.93□□□□□ -0.18
HDAC4-206ENST00000460235 DUSP28Q4G0W2 176 aa13.93□□□□□ -0.18
HDAC4-206ENST00000460235 FBXO16Q8IX29 292 aaPredicted RBP13.93□□□□□ -0.18
HDAC4-206ENST00000460235 DHX37Q8IY37 1157 aaKnown RBP13.93□□□□□ -0.18
HDAC4-206ENST00000460235 SMAP1Q8IYB5 467 aaPredicted RBP13.93□□□□□ -0.18
HDAC4-206ENST00000460235 KRI1Q8N9T8 703 aaKnown RBP13.93□□□□□ -0.18
HDAC4-206ENST00000460235 SLC5A5Q92911 643 aa13.93□□□□□ -0.18
HDAC4-206ENST00000460235 TNPO1Q92973 898 aaKnown RBP13.93□□□□□ -0.18
HDAC4-206ENST00000460235 USP28Q96RU2 1077 aa13.93□□□□□ -0.18
HDAC4-206ENST00000460235 KCNMB3Q9NPA1 279 aa13.93□□□□□ -0.18
HDAC4-206ENST00000460235 TFIP11Q9UBB9 837 aaKnown RBP13.93□□□□□ -0.18
HDAC4-206ENST00000460235 RCOR1Q9UKL0 485 aa13.93□□□□□ -0.18
HDAC4-206ENST00000460235 PTCH2Q9Y6C5 1203 aa13.93□□□□□ -0.18
HDAC4-206ENST00000460235 ASTN1O14525 1302 aa13.92□□□□□ -0.18
HDAC4-206ENST00000460235 MSH4O15457 936 aa13.92□□□□□ -0.18
HDAC4-206ENST00000460235 KPNA6O60684 536 aa13.92□□□□□ -0.18
HDAC4-206ENST00000460235 RARBP10826 455 aa13.92□□□□□ -0.18
HDAC4-206ENST00000460235 ELNP15502 786 aa13.92□□□□□ -0.18
HDAC4-206ENST00000460235 LONP1P36776 959 aaKnown RBP13.92□□□□□ -0.18
HDAC4-206ENST00000460235 TXKP42681 527 aa13.92□□□□□ -0.18
HDAC4-206ENST00000460235 ME1P48163 572 aa13.92□□□□□ -0.18
HDAC4-206ENST00000460235 JAK3P52333 1124 aa13.92□□□□□ -0.18
HDAC4-206ENST00000460235 CEBPZQ03701 1054 aaKnown RBP13.92□□□□□ -0.18
HDAC4-206ENST00000460235 ZNF746Q6NUN9 644 aaPredicted RBP13.92□□□□□ -0.18
HDAC4-206ENST00000460235 METTL7BQ6UX53 244 aa13.92□□□□□ -0.18
HDAC4-206ENST00000460235 KCTD17Q8N5Z5 321 aa13.92□□□□□ -0.18
HDAC4-206ENST00000460235 LINC00301Q8NCQ3 95 aa13.92□□□□□ -0.18
HDAC4-206ENST00000460235 MTMR9Q96QG7 549 aa13.92□□□□□ -0.18
HDAC4-206ENST00000460235 PYM1Q9BRP8 204 aaKnown RBP13.92□□□□□ -0.18
HDAC4-206ENST00000460235 TTC12Q9H892 705 aaPredicted RBP13.92□□□□□ -0.18
HDAC4-206ENST00000460235 JPH1Q9HDC5 661 aaPredicted RBP13.92□□□□□ -0.18
HDAC4-206ENST00000460235 FLRT1Q9NZU1 646 aa13.92□□□□□ -0.18
HDAC4-206ENST00000460235 DDX41Q9UJV9 622 aaKnown RBP13.92□□□□□ -0.18
HDAC4-206ENST00000460235 PLXNA1Q9UIW2 1896 aa13.92□□□□□ -0.18
HDAC4-206ENST00000460235 WDR64B1ANS9 1081 aa13.91□□□□□ -0.18
HDAC4-206ENST00000460235 SLC37A4O43826 429 aa13.91□□□□□ -0.18
HDAC4-206ENST00000460235 DUSP11O75319 330 aaKnown RBP13.91□□□□□ -0.18
HDAC4-206ENST00000460235 IGHA2P01877 340 aa13.91□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 22.4 ms